RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 A0A0J9YY10 115 aa2.34□□□□□ -2.03
VPS13A-211ENST00000484581 TMEM269A0A1B0GVZ9 245 aa2.34□□□□□ -2.03
VPS13A-211ENST00000484581 A0A1B0GX78 115 aa2.34□□□□□ -2.03
VPS13A-211ENST00000484581 G3V3Q6 166 aa2.34□□□□□ -2.03
VPS13A-211ENST00000484581 SERPINA7P05543 415 aa2.34□□□□□ -2.03
VPS13A-211ENST00000484581 BLVRBP30043 206 aaPredicted RBP2.34□□□□□ -2.03
VPS13A-211ENST00000484581 SERPINB9P50453 376 aa2.34□□□□□ -2.03
VPS13A-211ENST00000484581 RAB13P51153 203 aa2.34□□□□□ -2.03
VPS13A-211ENST00000484581 AKR1C1Q04828 323 aa2.34□□□□□ -2.03
VPS13A-211ENST00000484581 TEX36Q5VZQ5 186 aa2.34□□□□□ -2.03
VPS13A-211ENST00000484581 FAM173BQ6P4H8 233 aa2.34□□□□□ -2.03
VPS13A-211ENST00000484581 DHRS4L2Q6PKH6 230 aa2.34□□□□□ -2.03
VPS13A-211ENST00000484581 OOSP2Q86WS3 158 aa2.34□□□□□ -2.03
VPS13A-211ENST00000484581 SLC35F6Q8N357 371 aa2.34□□□□□ -2.03
VPS13A-211ENST00000484581 ZNF283Q8N7M2 679 aa2.34□□□□□ -2.03
VPS13A-211ENST00000484581 OR51A2Q8NGJ7 313 aa2.34□□□□□ -2.03
VPS13A-211ENST00000484581 ERMAPQ96PL5 475 aaPredicted RBP2.34□□□□□ -2.03
VPS13A-211ENST00000484581 NIPSNAP1Q9BPW8 284 aa2.34□□□□□ -2.03
VPS13A-211ENST00000484581 MIEN1Q9BRT3 115 aa2.34□□□□□ -2.03
VPS13A-211ENST00000484581 WDR61Q9GZS3 305 aaKnown RBP2.34□□□□□ -2.03
VPS13A-211ENST00000484581 CISHQ9NSE2 258 aa2.34□□□□□ -2.03
VPS13A-211ENST00000484581 PAQR5Q9NXK6 330 aaPredicted RBP2.34□□□□□ -2.03
VPS13A-211ENST00000484581 EIF3AQ14152 1382 aaKnown RBP2.34□□□□□ -2.04
VPS13A-211ENST00000484581 DHX57Q6P158 1386 aaKnown RBP2.34□□□□□ -2.04
VPS13A-211ENST00000484581 PIK3C2GO75747 1445 aa2.34□□□□□ -2.04
VPS13A-211ENST00000484581 NUP160Q12769 1436 aa2.34□□□□□ -2.04
VPS13A-211ENST00000484581 IGLV10-54A0A075B6I4 117 aa2.33□□□□□ -2.04
VPS13A-211ENST00000484581 MDFIC2A0A1B0GVS7 189 aa2.33□□□□□ -2.04
VPS13A-211ENST00000484581 A0A1W2PQD3 144 aa2.33□□□□□ -2.04
VPS13A-211ENST00000484581 TMEM238C9JI98 176 aa2.33□□□□□ -2.04
VPS13A-211ENST00000484581 I3L521 148 aa2.33□□□□□ -2.04
VPS13A-211ENST00000484581 CTSGP08311 255 aa2.33□□□□□ -2.04
VPS13A-211ENST00000484581 CSN1S1P47710 185 aa2.33□□□□□ -2.04
VPS13A-211ENST00000484581 RPS20P60866 119 aaKnown RBP2.33□□□□□ -2.04
VPS13A-211ENST00000484581 MIAQ16674 131 aa2.33□□□□□ -2.04
VPS13A-211ENST00000484581 C9orf64Q5T6V5 341 aa2.33□□□□□ -2.04
VPS13A-211ENST00000484581 TCF24Q7RTU0 167 aa2.33□□□□□ -2.04
VPS13A-211ENST00000484581 STX12Q86Y82 276 aa2.33□□□□□ -2.04
VPS13A-211ENST00000484581 OR52L1Q8NGH7 329 aa2.33□□□□□ -2.04
VPS13A-211ENST00000484581 MRPL30Q8TCC3 161 aaKnown RBP2.33□□□□□ -2.04
VPS13A-211ENST00000484581 ZNF675Q8TD23 568 aa2.33□□□□□ -2.04
VPS13A-211ENST00000484581 CT55Q8WUE5 264 aa2.33□□□□□ -2.04
VPS13A-211ENST00000484581 KLF6Q99612 283 aaPredicted RBP2.33□□□□□ -2.04
VPS13A-211ENST00000484581 PRRT1Q99946 306 aa2.33□□□□□ -2.04
VPS13A-211ENST00000484581 TMEM147Q9BVK8 224 aa2.33□□□□□ -2.04
VPS13A-211ENST00000484581 RNASE7Q9H1E1 156 aaKnown RBP2.33□□□□□ -2.04
VPS13A-211ENST00000484581 EFCAB1Q9HAE3 211 aa2.33□□□□□ -2.04
VPS13A-211ENST00000484581 C14orf105Q9NVL8 296 aa2.33□□□□□ -2.04
VPS13A-211ENST00000484581 ARMC1Q9NVT9 282 aa2.33□□□□□ -2.04
VPS13A-211ENST00000484581 MINOS1-NBL1R4GNA1 71 aa2.33□□□□□ -2.04
VPS13A-211ENST00000484581 TMEM56-RWDD3S4R434 201 aa2.33□□□□□ -2.04
VPS13A-211ENST00000484581 VPS37CA5D8V6 355 aaPredicted RBP2.32□□□□□ -2.04
VPS13A-211ENST00000484581 TXNDC9O14530 226 aa2.32□□□□□ -2.04
VPS13A-211ENST00000484581 ZNF189O75820 626 aaPredicted RBP2.32□□□□□ -2.04
VPS13A-211ENST00000484581 CRYZL1O95825 349 aa2.32□□□□□ -2.04
VPS13A-211ENST00000484581 SERPINE1P05121 402 aa2.32□□□□□ -2.04
VPS13A-211ENST00000484581 S100A7P31151 101 aa2.32□□□□□ -2.04
VPS13A-211ENST00000484581 CCL20P78556 96 aa2.32□□□□□ -2.04
VPS13A-211ENST00000484581 TMPPEQ6ZT21 453 aa2.32□□□□□ -2.04
VPS13A-211ENST00000484581 SLC36A1Q7Z2H8 476 aa2.32□□□□□ -2.04
VPS13A-211ENST00000484581 TMED4Q7Z7H5 227 aa2.32□□□□□ -2.04
VPS13A-211ENST00000484581 OR5C1Q8NGR4 320 aa2.32□□□□□ -2.04
VPS13A-211ENST00000484581 ACOT12Q8WYK0 555 aa2.32□□□□□ -2.04
VPS13A-211ENST00000484581 ZNF471Q9BX82 626 aaPredicted RBP2.32□□□□□ -2.04
VPS13A-211ENST00000484581 LCE3DQ9BYE3 92 aa2.32□□□□□ -2.04
VPS13A-211ENST00000484581 TTTY13Q9BZ97 58 aa2.32□□□□□ -2.04
VPS13A-211ENST00000484581 C20orf27Q9GZN8 174 aa2.32□□□□□ -2.04
VPS13A-211ENST00000484581 UQCC1Q9NVA1 299 aa2.32□□□□□ -2.04
VPS13A-211ENST00000484581 FBXL12Q9NXK8 326 aa2.32□□□□□ -2.04
VPS13A-211ENST00000484581 PSORS1C2Q9UIG4 136 aa2.32□□□□□ -2.04
VPS13A-211ENST00000484581 FAM32AQ9Y421 112 aaKnown RBP2.32□□□□□ -2.04
VPS13A-211ENST00000484581 SCN9AQ15858 1988 aa2.31□□□□□ -2.04
VPS13A-211ENST00000484581 ARHGAP32A7KAX9 2087 aa2.31□□□□□ -2.04
VPS13A-211ENST00000484581 A0A0J9YX75 114 aa2.31□□□□□ -2.04
VPS13A-211ENST00000484581 FAM159BA6NKW6 160 aa2.31□□□□□ -2.04
VPS13A-211ENST00000484581 PRM2P04554 102 aa2.31□□□□□ -2.04
VPS13A-211ENST00000484581 UCHL1P09936 223 aa2.31□□□□□ -2.04
VPS13A-211ENST00000484581 ZNF728P0DKX0 622 aa2.31□□□□□ -2.04
VPS13A-211ENST00000484581 GNG10P50151 68 aa2.31□□□□□ -2.04
VPS13A-211ENST00000484581 AP1S1P61966 158 aa2.31□□□□□ -2.04
VPS13A-211ENST00000484581 HBA1P69905 142 aa2.31□□□□□ -2.04
VPS13A-211ENST00000484581 KRR1Q13601 381 aaKnown RBP2.31□□□□□ -2.04
VPS13A-211ENST00000484581 GDPD1Q8N9F7 314 aa2.31□□□□□ -2.04
VPS13A-211ENST00000484581 OR4C16Q8NGL9 310 aa2.31□□□□□ -2.04
VPS13A-211ENST00000484581 FGF13Q92913 245 aa2.31□□□□□ -2.04
VPS13A-211ENST00000484581 CAMSAP1Q5T5Y3 1602 aa2.31□□□□□ -2.04
VPS13A-211ENST00000484581 UNC13AQ9UPW8 1703 aa2.31□□□□□ -2.04
VPS13A-211ENST00000484581 C11orf86A6NJI1 115 aa2.3□□□□□ -2.04
VPS13A-211ENST00000484581 ODF3BA8MYP8 253 aa2.3□□□□□ -2.04
VPS13A-211ENST00000484581 LEPROTO15243 131 aa2.3□□□□□ -2.04
VPS13A-211ENST00000484581 GNRH2O43555 120 aa2.3□□□□□ -2.04
VPS13A-211ENST00000484581 C1QAP02745 245 aa2.3□□□□□ -2.04
VPS13A-211ENST00000484581 CYBAP13498 195 aa2.3□□□□□ -2.04
VPS13A-211ENST00000484581 CCL5P13501 91 aa2.3□□□□□ -2.04
VPS13A-211ENST00000484581 G0S2P27469 103 aa2.3□□□□□ -2.04
VPS13A-211ENST00000484581 ALDH3A1P30838 453 aa2.3□□□□□ -2.04
VPS13A-211ENST00000484581 GABRA4P48169 554 aa2.3□□□□□ -2.04
VPS13A-211ENST00000484581 RPL19P84098 196 aaKnown RBP2.3□□□□□ -2.04
VPS13A-211ENST00000484581 OR11H6Q8NGC7 330 aa2.3□□□□□ -2.04
VPS13A-211ENST00000484581 OR13C4Q8NGS5 318 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms