RNA–Protein interactions for RNA: ENST00000484412.1

HDLBP-240, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-240	ENST00000484412	PHLDA2	Q53GA4	152 aa		10.84	□□□□□ -0.67
HDLBP-240	ENST00000484412	OR2B11	Q5JQS5	317 aa		10.84	□□□□□ -0.67
HDLBP-240	ENST00000484412	FAM209B	Q5JX69	171 aa		10.84	□□□□□ -0.67
HDLBP-240	ENST00000484412	ETV3L	Q6ZN32	361 aa		10.84	□□□□□ -0.67
HDLBP-240	ENST00000484412	ZNF429	Q86V71	674 aa		10.84	□□□□□ -0.67
HDLBP-240	ENST00000484412	LINC00482	Q8N8I6	264 aa		10.84	□□□□□ -0.67
HDLBP-240	ENST00000484412	MARCH1	Q8TCQ1	289 aa		10.84	□□□□□ -0.67
HDLBP-240	ENST00000484412	GLYATL2	Q8WU03	294 aa		10.84	□□□□□ -0.67
HDLBP-240	ENST00000484412	C7orf50	Q9BRJ6	194 aa	Known RBP	10.84	□□□□□ -0.67
HDLBP-240	ENST00000484412	NDUFA4L2	Q9NRX3	87 aa		10.84	□□□□□ -0.67
HDLBP-240	ENST00000484412	TMEM140	Q9NV12	185 aa		10.84	□□□□□ -0.67
HDLBP-240	ENST00000484412	COPZ2	Q9P299	210 aa		10.84	□□□□□ -0.67
HDLBP-240	ENST00000484412	ZNF257	Q9Y2Q1	563 aa		10.84	□□□□□ -0.67
HDLBP-240	ENST00000484412	PIGBOS1	A0A0B4J2F0	54 aa		10.83	□□□□□ -0.68
HDLBP-240	ENST00000484412	CGB1	A6NKQ9	187 aa		10.83	□□□□□ -0.68
HDLBP-240	ENST00000484412	INS-IGF2	F8WCM5	200 aa		10.83	□□□□□ -0.68
HDLBP-240	ENST00000484412	WIPF1	O43516	503 aa		10.83	□□□□□ -0.68
HDLBP-240	ENST00000484412	PF4V1	P10720	104 aa		10.83	□□□□□ -0.68
HDLBP-240	ENST00000484412	CTRB1	P17538	263 aa		10.83	□□□□□ -0.68
HDLBP-240	ENST00000484412	RPL27A	P46776	148 aa	Known RBP	10.83	□□□□□ -0.68
HDLBP-240	ENST00000484412	OR2B8P	P59922	312 aa		10.83	□□□□□ -0.68
HDLBP-240	ENST00000484412	ERVK-16	P61578	105 aa		10.83	□□□□□ -0.68
HDLBP-240	ENST00000484412	BAK1	Q16611	211 aa		10.83	□□□□□ -0.68
HDLBP-240	ENST00000484412	ECSCR	Q19T08	205 aa		10.83	□□□□□ -0.68
HDLBP-240	ENST00000484412	KPRP	Q5T749	579 aa	Predicted RBP	10.83	□□□□□ -0.68
HDLBP-240	ENST00000484412	CTRB2	Q6GPI1	263 aa		10.83	□□□□□ -0.68
HDLBP-240	ENST00000484412	OR5B3	Q8NH48	314 aa		10.83	□□□□□ -0.68
HDLBP-240	ENST00000484412	TMEM56	Q96MV1	263 aa		10.83	□□□□□ -0.68
HDLBP-240	ENST00000484412	TMEM222	Q9H0R3	208 aa		10.83	□□□□□ -0.68
HDLBP-240	ENST00000484412	KCNIP3	Q9Y2W7	256 aa		10.83	□□□□□ -0.68
HDLBP-240	ENST00000484412	TMEM56-RWDD3	S4R434	201 aa		10.83	□□□□□ -0.68
HDLBP-240	ENST00000484412	PKD1L1	Q8TDX9	2849 aa		10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412	TRAV3	A0A0B4J244	114 aa		10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412	TEX50	A0A1B0GTY4	177 aa		10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412		A0A1B0GW64	132 aa		10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412	CRYM-AS1	A6NIL9	109 aa		10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412	CCL24	O00175	119 aa		10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412	KRAS	P01116	189 aa		10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412	SERPINE2	P07093	398 aa		10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412	PGAM2	P15259	253 aa		10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412	AARD	Q4LEZ3	155 aa		10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412	SAMD5	Q5TGI4	173 aa		10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412	ZNF343	Q6P1L6	599 aa		10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412	C8orf86	Q6ZUL3	223 aa		10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412	SSX9	Q7RTT3	188 aa		10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412	FAM219A	Q8IW50	185 aa		10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412	MRPL41	Q8IXM3	137 aa	Known RBP	10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412	DMBX1	Q8NFW5	382 aa		10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412	OR5T1	Q8NG75	326 aa		10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412	GRPEL2	Q8TAA5	225 aa		10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412	IL22RA2	Q969J5	263 aa		10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412	RCC1L	Q96I51	464 aa	Known RBP	10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412	RAX2	Q96IS3	184 aa		10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412	FYTTD1	Q96QD9	318 aa	Known RBP	10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412	TP53RK	Q96S44	253 aa		10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412	MCRIP2	Q9BUT9	160 aa	Known RBP	10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412	COMMD5	Q9GZQ3	224 aa		10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412	TMEM14B	Q9NUH8	114 aa		10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412	PRND	Q9UKY0	176 aa		10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412	C14orf166	Q9Y224	244 aa	Known RBP	10.82	□□□□□ -0.68
HDLBP-240	ENST00000484412	MGAM2	Q2M2H8	2515 aa		10.81	□□□□□ -0.68
HDLBP-240	ENST00000484412	SNAPC5	O75971	98 aa		10.81	□□□□□ -0.68
HDLBP-240	ENST00000484412	HSPB1	P04792	205 aa	Known RBP	10.81	□□□□□ -0.68
HDLBP-240	ENST00000484412	HIST1H1B	P16401	226 aa	Known RBP	10.81	□□□□□ -0.68
HDLBP-240	ENST00000484412	PSMB6	P28072	239 aa		10.81	□□□□□ -0.68
HDLBP-240	ENST00000484412	GNB1	P62873	340 aa		10.81	□□□□□ -0.68
HDLBP-240	ENST00000484412	TMEM128	Q5BJH2	165 aa		10.81	□□□□□ -0.68
HDLBP-240	ENST00000484412	HIST2H2BD	Q6DRA6	164 aa		10.81	□□□□□ -0.68
HDLBP-240	ENST00000484412	FAAP20	Q6NZ36	180 aa		10.81	□□□□□ -0.68
HDLBP-240	ENST00000484412	LCNL1	Q6ZST4	164 aa		10.81	□□□□□ -0.68
HDLBP-240	ENST00000484412	KLHL30-AS1	Q8NEE0	82 aa		10.81	□□□□□ -0.68
HDLBP-240	ENST00000484412	OR11H1	Q8NG94	326 aa		10.81	□□□□□ -0.68
HDLBP-240	ENST00000484412	OR1L8	Q8NGR8	309 aa		10.81	□□□□□ -0.68
HDLBP-240	ENST00000484412	ABHD5	Q8WTS1	349 aa		10.81	□□□□□ -0.68
HDLBP-240	ENST00000484412	ATP6V0B	Q99437	205 aa		10.81	□□□□□ -0.68
HDLBP-240	ENST00000484412	NAA60	Q9H7X0	242 aa		10.81	□□□□□ -0.68
HDLBP-240	ENST00000484412	AKIP1	Q9NQ31	210 aa		10.81	□□□□□ -0.68
HDLBP-240	ENST00000484412	CACFD1	Q9UGQ2	172 aa		10.81	□□□□□ -0.68
HDLBP-240	ENST00000484412	FAM223B	A6NKX1	122 aa		10.8	□□□□□ -0.68
HDLBP-240	ENST00000484412	DHFR	P00374	187 aa		10.8	□□□□□ -0.68
HDLBP-240	ENST00000484412	TRGV3	P03979	118 aa		10.8	□□□□□ -0.68
HDLBP-240	ENST00000484412	LGALS1	P09382	135 aa	Known RBP	10.8	□□□□□ -0.68
HDLBP-240	ENST00000484412	TRAPPC2	P0DI81	140 aa		10.8	□□□□□ -0.68
HDLBP-240	ENST00000484412	TRAPPC2B	P0DI82	140 aa		10.8	□□□□□ -0.68
HDLBP-240	ENST00000484412	G6PC	P35575	357 aa		10.8	□□□□□ -0.68
HDLBP-240	ENST00000484412	PPP5C	P53041	499 aa		10.8	□□□□□ -0.68
HDLBP-240	ENST00000484412	PDLIM3	Q53GG5	364 aa	Predicted RBP	10.8	□□□□□ -0.68
HDLBP-240	ENST00000484412	C18orf65	Q6ZTR6	163 aa		10.8	□□□□□ -0.68
HDLBP-240	ENST00000484412	H2BFWT	Q7Z2G1	175 aa		10.8	□□□□□ -0.68
HDLBP-240	ENST00000484412	FAM223A	Q8IWN6	122 aa		10.8	□□□□□ -0.68
HDLBP-240	ENST00000484412	SGPP2	Q8IWX5	399 aa		10.8	□□□□□ -0.68
HDLBP-240	ENST00000484412	NECAP1	Q8NC96	275 aa		10.8	□□□□□ -0.68
HDLBP-240	ENST00000484412	OR1L6	Q8NGR2	347 aa		10.8	□□□□□ -0.68
HDLBP-240	ENST00000484412	OR1N2	Q8NGR9	330 aa		10.8	□□□□□ -0.68
HDLBP-240	ENST00000484412	S100Z	Q8WXG8	99 aa		10.8	□□□□□ -0.68
HDLBP-240	ENST00000484412	LSM10	Q969L4	123 aa	Known RBP	10.8	□□□□□ -0.68
HDLBP-240	ENST00000484412	TMEM230	Q96A57	120 aa		10.8	□□□□□ -0.68
HDLBP-240	ENST00000484412	FANCD2OS	Q96PS1	177 aa		10.8	□□□□□ -0.68
HDLBP-240	ENST00000484412	PHB2	Q99623	299 aa		10.8	□□□□□ -0.68
HDLBP-240	ENST00000484412	CCDC32	Q9BV29	185 aa		10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms