RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 SRSF8Q9BRL6 282 aaKnown RBP4.74□□□□□ -1.65
PTCD3-215ENST00000484203 FAM103A1Q9BTL3 118 aaKnown RBP4.74□□□□□ -1.65
PTCD3-215ENST00000484203 OR51E2Q9H255 320 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 AUNIPQ9H7T9 357 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 IFT46Q9NQC8 304 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 COA4Q9NYJ1 87 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 PEMTQ9UBM1 199 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 ZNF257Q9Y2Q1 563 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 FBXO7Q9Y3I1 522 aa4.74□□□□□ -1.65
PTCD3-215ENST00000484203 IGHV4OR15-8A0A075B7B6 117 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 A0A087WW49 117 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 SRRM4A7MD48 611 aaKnown RBP4.73□□□□□ -1.65
PTCD3-215ENST00000484203 LINC00473A8K010 186 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 NPIPB5A8MRT5 1133 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 TPPPO94811 219 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 PPYP01298 95 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 IGHV3-11P01762 117 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 SAA1P0DJI8 122 aaPredicted RBP4.73□□□□□ -1.65
PTCD3-215ENST00000484203 FCGR2CP31995 323 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 TAS2R31P59538 309 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 HERV-K104P61576 105 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 RPL8P62917 257 aaKnown RBP4.73□□□□□ -1.65
PTCD3-215ENST00000484203 MXD1Q05195 221 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 PJVKQ0ZLH3 352 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 KLF5Q13887 457 aaPredicted RBP4.73□□□□□ -1.65
PTCD3-215ENST00000484203 RPEL1Q2QD12 228 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 UBE2NLQ5JXB2 153 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 TMEM69Q5SWH9 247 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 ASPHD1Q5U4P2 390 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 LCN12Q6JVE5 192 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 LPCAT3Q6P1A2 487 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 GTSCR1Q86UQ5 136 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 SGPP2Q8IWX5 399 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 CADM3Q8N126 398 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 ADAD2Q8NCV1 583 aaKnown RBP4.73□□□□□ -1.65
PTCD3-215ENST00000484203 OR5AP2Q8NGF4 316 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 OR9G4Q8NGQ1 327 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 OR13F1Q8NGS4 319 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 TMEM167AQ8TBQ9 72 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 AP3S1Q92572 193 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 ZNF430Q9H8G1 570 aaPredicted RBP4.73□□□□□ -1.65
PTCD3-215ENST00000484203 SCPEP1Q9HB40 452 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 SLC2A9Q9NRM0 540 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 BET1LQ9NYM9 111 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 THYN1Q9P016 225 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 DKK2Q9UBU2 259 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 SLC45A2Q9UMX9 530 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 U3KQK5 164 aa4.73□□□□□ -1.65
PTCD3-215ENST00000484203 IGKV1D-8A0A087WSZ0 117 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 TRBV9A0A0B4J1U6 114 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 A8MZ25 164 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 SSX5O60225 188 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 KBTBD11O94819 623 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 HPRT1P00492 218 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 IGLV1-51P01701 117 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 DEFA4P12838 97 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 GP9P14770 177 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 NQO2P16083 231 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 PRSS3P35030 304 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 RPL27AP46776 148 aaKnown RBP4.72□□□□□ -1.65
PTCD3-215ENST00000484203 LINC00205P59089 165 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 ERVK-16P61578 105 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 RHOGP84095 191 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 DHRS11Q6UWP2 260 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 LAX1Q8IWV1 398 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 Q8N402 240 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 OR1L6Q8NGR2 347 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 SECTM1Q8WVN6 248 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 SLC25A46Q96AG3 418 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 SLC25A38Q96DW6 304 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 CYYR1Q96J86 154 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 CXorf58Q96LI9 332 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 PRR25Q96S07 402 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 ATP6V0BQ99437 205 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 C1orf43Q9BWL3 253 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 COMMD5Q9GZQ3 224 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 SLC5A7Q9GZV3 580 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 ALX4Q9H161 411 aaPredicted RBP4.72□□□□□ -1.65
PTCD3-215ENST00000484203 PLEKHA2Q9HB19 425 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 FAM212BQ9NTI7 297 aaPredicted RBP4.72□□□□□ -1.65
PTCD3-215ENST00000484203 FKBP11Q9NYL4 201 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 TAS2R8Q9NYW2 309 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 COMMD9Q9P000 198 aa4.72□□□□□ -1.65
PTCD3-215ENST00000484203 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.71□□□□□ -1.66
PTCD3-215ENST00000484203 TRBV7-1A0A0A6YYK4 115 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 IGKV1D-13A0A0B4J2D9 117 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 SMIM30A4D0T7 59 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 MARCH11A6NNE9 402 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 C3orf84H3BNL1 204 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 J3QRK9 145 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 SULT1C2O00338 296 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 GGCTO75223 188 aaKnown RBP4.71□□□□□ -1.66
PTCD3-215ENST00000484203 IGLV2-14P01704 120 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 APOA1P02647 267 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 SLPIP03973 132 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 CRYGCP07315 174 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 ZNF735P0CB33 412 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 IGKV1-13P0DP09 117 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 SPNP16150 400 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 HLA-GP17693 338 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms