RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 CEACAM21Q3KPI0 293 aa8.8□□□□□ -1
COL12A1-207ENST00000483888 UNQ9370/PRO34162Q6UXP9 181 aa8.8□□□□□ -1
COL12A1-207ENST00000483888 NXT2Q9NPJ8 142 aaKnown RBP8.8□□□□□ -1
COL12A1-207ENST00000483888 FRMPD3Q5JV73 1810 aa8.79□□□□□ -1
COL12A1-207ENST00000483888 PATE1Q8WXA2 126 aa8.79□□□□□ -1
COL12A1-207ENST00000483888 RAB1BQ9H0U4 201 aa8.79□□□□□ -1
COL12A1-207ENST00000483888 TRBV7-9A0A0J9YWB2 115 aa8.79□□□□□ -1
COL12A1-207ENST00000483888 PEX7O00628 323 aa8.79□□□□□ -1
COL12A1-207ENST00000483888 PATE4P0C8F1 98 aa8.79□□□□□ -1
COL12A1-207ENST00000483888 TNFRSF4P43489 277 aa8.79□□□□□ -1
COL12A1-207ENST00000483888 NEUROG3Q9Y4Z2 214 aa8.79□□□□□ -1
COL12A1-207ENST00000483888 MRPL32Q9BYC8 188 aaKnown RBP8.79□□□□□ -1
COL12A1-207ENST00000483888 TRBV5-7A0A0A0MS05 114 aa8.79□□□□□ -1
COL12A1-207ENST00000483888 ATG4DQ86TL0 474 aaPredicted RBP8.79□□□□□ -1
COL12A1-207ENST00000483888 ERG28Q9UKR5 140 aa8.79□□□□□ -1
COL12A1-207ENST00000483888 MPC1Q9Y5U8 109 aa8.79□□□□□ -1
COL12A1-207ENST00000483888 IL2RAP01589 272 aa8.79□□□□□ -1
COL12A1-207ENST00000483888 RPL8P62917 257 aaKnown RBP8.79□□□□□ -1
COL12A1-207ENST00000483888 CBLN3Q6UW01 205 aa8.79□□□□□ -1
COL12A1-207ENST00000483888 ZNF488Q96MN9 340 aa8.79□□□□□ -1
COL12A1-207ENST00000483888 CXXC4Q9H2H0 198 aa8.79□□□□□ -1
COL12A1-207ENST00000483888 GREB1LQ9C091 1923 aaPredicted RBP8.79□□□□□ -1
COL12A1-207ENST00000483888 CEP250Q9BV73 2442 aa8.79□□□□□ -1
COL12A1-207ENST00000483888 LRTM2Q8N967 370 aa8.79□□□□□ -1
COL12A1-207ENST00000483888 ZNF385AQ96PM9 386 aaKnown RBP8.79□□□□□ -1
COL12A1-207ENST00000483888 DEFB127Q9H1M4 99 aa8.79□□□□□ -1
COL12A1-207ENST00000483888 PF4V1P10720 104 aa8.79□□□□□ -1
COL12A1-207ENST00000483888 C2orf82Q6UX34 121 aa8.79□□□□□ -1
COL12A1-207ENST00000483888 TFF3Q07654 80 aa8.79□□□□□ -1
COL12A1-207ENST00000483888 SLC25A10Q9UBX3 287 aaPredicted RBP8.79□□□□□ -1
COL12A1-207ENST00000483888 OR51G1Q8NGK1 321 aa8.78□□□□□ -1
COL12A1-207ENST00000483888 RAB1CQ92928 201 aa8.78□□□□□ -1
COL12A1-207ENST00000483888 FAM157AC9JC47 383 aa8.78□□□□□ -1
COL12A1-207ENST00000483888 PIN1P1O15428 100 aa8.78□□□□□ -1
COL12A1-207ENST00000483888 IGLV3-27P01718 113 aa8.78□□□□□ -1
COL12A1-207ENST00000483888 HBDP02042 147 aa8.78□□□□□ -1
COL12A1-207ENST00000483888 MPZP25189 248 aa8.78□□□□□ -1
COL12A1-207ENST00000483888 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.78□□□□□ -1
COL12A1-207ENST00000483888 MOSP00540 346 aa8.78□□□□□ -1
COL12A1-207ENST00000483888 MS4A5Q9H3V2 200 aa8.78□□□□□ -1
COL12A1-207ENST00000483888 FGF22Q9HCT0 170 aa8.78□□□□□ -1
COL12A1-207ENST00000483888 A0A1B0GTI1 187 aa8.78□□□□□ -1
COL12A1-207ENST00000483888 SRD5A2P31213 254 aa8.78□□□□□ -1
COL12A1-207ENST00000483888 CDKN1AP38936 164 aa8.78□□□□□ -1
COL12A1-207ENST00000483888 C3AR1Q16581 482 aa8.78□□□□□ -1
COL12A1-207ENST00000483888 ZNF818PQ6ZRF7 136 aa8.78□□□□□ -1
COL12A1-207ENST00000483888 C20orf144Q9BQM9 153 aa8.78□□□□□ -1
COL12A1-207ENST00000483888 C9orf118A6NHY6 69 aa8.78□□□□□ -1
COL12A1-207ENST00000483888 ZNF815PA8K554 130 aa8.78□□□□□ -1
COL12A1-207ENST00000483888 OR9G9P0C7N8 305 aa8.78□□□□□ -1
COL12A1-207ENST00000483888 CD33P20138 364 aa8.78□□□□□ -1
COL12A1-207ENST00000483888 LY6G6FQ5SQ64 297 aa8.78□□□□□ -1
COL12A1-207ENST00000483888 A0A1W2PRE2 83 aa8.78□□□□□ -1
COL12A1-207ENST00000483888 ZGLP1P0C6A0 271 aa8.78□□□□□ -1
COL12A1-207ENST00000483888 IGFBP2P18065 325 aa8.78□□□□□ -1
COL12A1-207ENST00000483888 CEACAM8P31997 349 aaPredicted RBP8.78□□□□□ -1
COL12A1-207ENST00000483888 SUMO2P61956 95 aaKnown RBP8.78□□□□□ -1
COL12A1-207ENST00000483888 SLAQ13239 276 aa8.78□□□□□ -1
COL12A1-207ENST00000483888 SRSF8Q9BRL6 282 aaKnown RBP8.78□□□□□ -1
COL12A1-207ENST00000483888 TNFSF14O43557 240 aa8.77□□□□□ -1
COL12A1-207ENST00000483888 CT62P0C5K7 136 aa8.77□□□□□ -1
COL12A1-207ENST00000483888 LIMS1P48059 325 aa8.77□□□□□ -1
COL12A1-207ENST00000483888 ARID2Q68CP9 1835 aa8.77□□□□□ -1
COL12A1-207ENST00000483888 DLL1O00548 723 aa8.77□□□□□ -1
COL12A1-207ENST00000483888 ZIC3O60481 467 aa8.77□□□□□ -1
COL12A1-207ENST00000483888 NXPH1P58417 271 aa8.77□□□□□ -1
COL12A1-207ENST00000483888 AHCTF1Q8WYP5 2266 aa8.77□□□□□ -1.01
COL12A1-207ENST00000483888 SHISA3A0PJX4 238 aa8.77□□□□□ -1.01
COL12A1-207ENST00000483888 F8W1H4 67 aa8.77□□□□□ -1.01
COL12A1-207ENST00000483888 H3BRM9 83 aa8.77□□□□□ -1.01
COL12A1-207ENST00000483888 ADCYAP1P18509 176 aa8.77□□□□□ -1.01
COL12A1-207ENST00000483888 EAF1Q96JC9 268 aaPredicted RBP8.77□□□□□ -1.01
COL12A1-207ENST00000483888 CLDN14O95500 239 aa8.77□□□□□ -1.01
COL12A1-207ENST00000483888 EVI2AP22794 236 aa8.77□□□□□ -1.01
COL12A1-207ENST00000483888 FMC1Q96HJ9 113 aa8.77□□□□□ -1.01
COL12A1-207ENST00000483888 GNRHR2Q96P88 292 aa8.77□□□□□ -1.01
COL12A1-207ENST00000483888 ABCA3Q99758 1704 aa8.77□□□□□ -1.01
COL12A1-207ENST00000483888 NHSQ6T4R5 1651 aa8.77□□□□□ -1.01
COL12A1-207ENST00000483888 LGALS1P09382 135 aaKnown RBP8.77□□□□□ -1.01
COL12A1-207ENST00000483888 FBXW9Q5XUX1 488 aa8.77□□□□□ -1.01
COL12A1-207ENST00000483888 GAGE12JA6NER3 117 aa8.77□□□□□ -1.01
COL12A1-207ENST00000483888 SYNGR3O43761 229 aa8.77□□□□□ -1.01
COL12A1-207ENST00000483888 GAGE7O76087 117 aa8.77□□□□□ -1.01
COL12A1-207ENST00000483888 C3orf79P0CE67 100 aa8.77□□□□□ -1.01
COL12A1-207ENST00000483888 GAGE12FP0CL80 117 aa8.77□□□□□ -1.01
COL12A1-207ENST00000483888 GAGE12GP0CL81 117 aa8.77□□□□□ -1.01
COL12A1-207ENST00000483888 GAGE12IP0CL82 117 aa8.77□□□□□ -1.01
COL12A1-207ENST00000483888 GAGE4Q13068 117 aa8.77□□□□□ -1.01
COL12A1-207ENST00000483888 OR10J6PQ8NGY7 276 aa8.77□□□□□ -1.01
COL12A1-207ENST00000483888 UPK3AO75631 287 aa8.77□□□□□ -1.01
COL12A1-207ENST00000483888 PEX11BO96011 259 aa8.77□□□□□ -1.01
COL12A1-207ENST00000483888 PAPPA-AS1Q5QFB9 102 aa8.77□□□□□ -1.01
COL12A1-207ENST00000483888 VSTM2LQ96N03 204 aa8.77□□□□□ -1.01
COL12A1-207ENST00000483888 PROCRQ9UNN8 238 aa8.77□□□□□ -1.01
COL12A1-207ENST00000483888 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.76□□□□□ -1.01
COL12A1-207ENST00000483888 TMPRSS2O15393 492 aa8.76□□□□□ -1.01
COL12A1-207ENST00000483888 C1orf100Q5SVJ3 147 aa8.76□□□□□ -1.01
COL12A1-207ENST00000483888 RASL11AQ6T310 242 aa8.76□□□□□ -1.01
COL12A1-207ENST00000483888 DMRTC2Q8IXT2 367 aaPredicted RBP8.76□□□□□ -1.01
COL12A1-207ENST00000483888 ZNF114Q8NC26 417 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms