RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 PRH1P02810 166 aa7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 OPN1MWP04001 364 aa7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 IL6RP08887 468 aaPredicted RBP7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 OPN1MW2P0DN77 364 aa7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 OPN1MW3P0DN78 364 aa7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 KIR2DS2P43631 304 aa7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 F2RL1P55085 397 aa7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 ERVK-16P61578 105 aa7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 SSX2Q16385 188 aa7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 OR5AN1Q8NGI8 311 aa7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 OR13D1Q8NGV5 346 aa7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 FAM213BQ8TBF2 198 aa7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 ZNF596Q8TC21 504 aa7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 SCRT1Q9BWW7 348 aa7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 TMEM133Q9H2Q1 129 aa7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 VSIRQ9H7M9 311 aa7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 SLC35D1Q9NTN3 355 aa7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 PDZD2O15018 2839 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 WNK2Q9Y3S1 2297 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 TRBV23-1A0A0A0MS06 115 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 PPIAL4CA0A0B4J2A2 164 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 A0A1W2PPH5 198 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 A6NNC1 897 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 FAM90A9PA6NNJ1 464 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 RRHO14718 337 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 DFFBO76075 338 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 PPIAL4GP0DN37 164 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 VDAC2P45880 294 aaPredicted RBP7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 CAMLGP49069 296 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 RAB4BP61018 213 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 BLOC1S1P78537 153 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 CCL20P78556 96 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 SLC38A11Q08AI6 406 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 SP5Q6BEB4 398 aaPredicted RBP7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 ZNF429Q86V71 674 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 ADTRPQ96IZ2 230 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 TMEM14BQ9NUH8 114 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 CREBBPQ92793 2442 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 IGHV2-26A0A0B4J1V2 119 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 UBE2L5PA0A1B0GUS4 154 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 TMEM218A2RU14 115 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 C15orf61A6NNL5 157 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 EIF3GO75821 320 aaKnown RBP eCLIP7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 APOC3P02656 99 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 HBG1P69891 147 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 HBG2P69892 147 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 POU2AF1Q16633 256 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 LRRC75BQ2VPJ9 315 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 PDLIM3Q53GG5 364 aaPredicted RBP7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 LDLRAD2Q5SZI1 272 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 IL34Q6ZMJ4 242 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 LINC00311Q8N616 119 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 OR9G1Q8NH87 305 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 WDR61Q9GZS3 305 aaKnown RBP7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 TCF19Q9Y242 345 aa7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 STRAPQ9Y3F4 350 aaKnown RBP7.17□□□□□ -1.26
CDC42SE1-204ENST00000483763 IGHV3-72A0A0B4J1Y9 119 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 FAM157AC9JC47 383 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 E7EUB6 86 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 H7C2Y5 167 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 IGLV1-47P01700 117 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 ARG1P05089 322 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 SAA1P0DJI8 122 aaPredicted RBP7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 WDR73Q6P4I2 378 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 UQCC3Q6UW78 93 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 C8orf31Q8N9H6 132 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 OR52E5Q8NH55 327 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 NEU4Q8WWR8 484 aaPredicted RBP7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 GNPNAT1Q96EK6 184 aaPredicted RBP7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 NABP2Q9BQ15 211 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 CHODLQ9H9P2 273 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 UQCC1Q9NVA1 299 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 CCDC168Q8NDH2 2452 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 IFNA5P01569 189 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 CD5P06127 495 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 SNCAP37840 140 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 RAB5CP51148 216 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 RAB13P51153 203 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 ZNF137PP52743 207 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 RTL8BQ17RB0 113 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 CYB5R2Q6BCY4 276 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 SLC25A24Q6NUK1 477 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 SPSB3Q6PJ21 355 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 Q8N7P7 452 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 LY6G5BQ8NDX9 201 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 OR10P1Q8NGE3 313 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 OR8B3Q8NGG8 313 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 C8orf46Q8TAG6 207 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 IGFBPL1Q8WX77 278 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 RAB1CQ92928 201 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 TMEM186Q96B77 213 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 NEIL1Q96FI4 390 aaPredicted RBP7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 CIB3Q96Q77 187 aaPredicted RBP7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 OR8B2Q96RD0 313 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 NKX6-2Q9C056 277 aaPredicted RBP7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 RPRMQ9NS64 109 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 MIOXQ9UGB7 285 aa7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 FOXA2Q9Y261 457 aaPredicted RBP7.16□□□□□ -1.26
CDC42SE1-204ENST00000483763 UMAD1C9J7I0 102 aa7.15□□□□□ -1.26
CDC42SE1-204ENST00000483763 RNASEK-C17orf49H0YIS7 233 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms