RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 EIF5A2Q9GZV4 153 aaKnown RBP10.74□□□□□ -0.69
CPNE1-225ENST00000483495 TEX50A0A1B0GTY4 177 aa10.73□□□□□ -0.69
CPNE1-225ENST00000483495 hCG_1809904A0A1W2PP81 198 aa10.73□□□□□ -0.69
CPNE1-225ENST00000483495 A0A1W2PPE2 198 aa10.73□□□□□ -0.69
CPNE1-225ENST00000483495 A0A1W2PR64 198 aa10.73□□□□□ -0.69
CPNE1-225ENST00000483495 A0A1W2PRV1 198 aa10.73□□□□□ -0.69
CPNE1-225ENST00000483495 RBFOX3A6NFN3 312 aa10.73□□□□□ -0.69
CPNE1-225ENST00000483495 C22orf46C9J442 243 aa10.73□□□□□ -0.69
CPNE1-225ENST00000483495 F12P00748 615 aaPredicted RBP10.73□□□□□ -0.69
CPNE1-225ENST00000483495 LIPFP07098 398 aa10.73□□□□□ -0.69
CPNE1-225ENST00000483495 ATP5IP56385 69 aaPredicted RBP10.73□□□□□ -0.69
CPNE1-225ENST00000483495 Q8N7P7 452 aa10.73□□□□□ -0.69
CPNE1-225ENST00000483495 SLC24A4Q8NFF2 622 aa10.73□□□□□ -0.69
CPNE1-225ENST00000483495 VSTM2AQ8TAG5 236 aa10.73□□□□□ -0.69
CPNE1-225ENST00000483495 RCC1LQ96I51 464 aaKnown RBP10.73□□□□□ -0.69
CPNE1-225ENST00000483495 ENY2Q9NPA8 101 aa10.73□□□□□ -0.69
CPNE1-225ENST00000483495 KPTNQ9Y664 436 aa10.73□□□□□ -0.69
CPNE1-225ENST00000483495 HRNRQ86YZ3 2850 aaPredicted RBP10.73□□□□□ -0.69
CPNE1-225ENST00000483495 A0A1B0GV50 99 aa10.72□□□□□ -0.69
CPNE1-225ENST00000483495 MPDU1O75352 247 aa10.72□□□□□ -0.69
CPNE1-225ENST00000483495 SNAPINO95295 136 aa10.72□□□□□ -0.69
CPNE1-225ENST00000483495 IGLV2-23P01705 113 aa10.72□□□□□ -0.69
CPNE1-225ENST00000483495 MBP02144 154 aa10.72□□□□□ -0.69
CPNE1-225ENST00000483495 MYOD1P15172 320 aa10.72□□□□□ -0.69
CPNE1-225ENST00000483495 USF1P22415 310 aaPredicted RBP10.72□□□□□ -0.69
CPNE1-225ENST00000483495 NPY1RP25929 384 aa10.72□□□□□ -0.69
CPNE1-225ENST00000483495 PPT1P50897 306 aa10.72□□□□□ -0.69
CPNE1-225ENST00000483495 ACSM6Q6P461 480 aa10.72□□□□□ -0.69
CPNE1-225ENST00000483495 TMEM167AQ8TBQ9 72 aa10.72□□□□□ -0.69
CPNE1-225ENST00000483495 MALRD1Q5VYJ5 2156 aa10.72□□□□□ -0.69
CPNE1-225ENST00000483495 DOCK11Q5JSL3 2073 aa10.72□□□□□ -0.69
CPNE1-225ENST00000483495 INS-IGF2F8WCM5 200 aa10.72□□□□□ -0.69
CPNE1-225ENST00000483495 BUB1B-PAK6H3BSN5 160 aa10.72□□□□□ -0.69
CPNE1-225ENST00000483495 DNASE2O00115 360 aaPredicted RBP10.72□□□□□ -0.69
CPNE1-225ENST00000483495 TSPAN4O14817 238 aa10.72□□□□□ -0.69
CPNE1-225ENST00000483495 SOX15O60248 233 aa10.72□□□□□ -0.69
CPNE1-225ENST00000483495 IGKV1D-33P01593 117 aa10.72□□□□□ -0.69
CPNE1-225ENST00000483495 IGKV1-33P01594 117 aa10.72□□□□□ -0.69
CPNE1-225ENST00000483495 BSXQ3C1V8 233 aa10.72□□□□□ -0.69
CPNE1-225ENST00000483495 RPP25LQ8N5L8 163 aaKnown RBP10.72□□□□□ -0.69
CPNE1-225ENST00000483495 CLDND2Q8NHS1 167 aa10.72□□□□□ -0.69
CPNE1-225ENST00000483495 SLC35B3Q9H1N7 401 aa10.72□□□□□ -0.69
CPNE1-225ENST00000483495 UBTD1Q9HAC8 227 aa10.72□□□□□ -0.69
CPNE1-225ENST00000483495 PLEKHA3Q9HB20 300 aa10.72□□□□□ -0.69
CPNE1-225ENST00000483495 TET2Q6N021 2002 aaPredicted RBP10.72□□□□□ -0.69
CPNE1-225ENST00000483495 FNDC10F2Z333 226 aa10.71□□□□□ -0.69
CPNE1-225ENST00000483495 C17orf112F2Z3M2 114 aa10.71□□□□□ -0.69
CPNE1-225ENST00000483495 CA2P00918 260 aa10.71□□□□□ -0.69
CPNE1-225ENST00000483495 CDKN1AP38936 164 aa10.71□□□□□ -0.69
CPNE1-225ENST00000483495 LGALS7P47929 136 aa10.71□□□□□ -0.69
CPNE1-225ENST00000483495 ELLP55199 621 aaPredicted RBP10.71□□□□□ -0.69
CPNE1-225ENST00000483495 RPL8P62917 257 aaKnown RBP10.71□□□□□ -0.69
CPNE1-225ENST00000483495 PMS2P11Q13670 270 aa10.71□□□□□ -0.69
CPNE1-225ENST00000483495 ZNF506Q5JVG8 444 aa10.71□□□□□ -0.69
CPNE1-225ENST00000483495 TREML4Q6UXN2 200 aa10.71□□□□□ -0.69
CPNE1-225ENST00000483495 SSX7Q7RTT5 188 aa10.71□□□□□ -0.69
CPNE1-225ENST00000483495 ZNF709Q8N972 641 aa10.71□□□□□ -0.69
CPNE1-225ENST00000483495 OR4P4Q8NGL7 312 aa10.71□□□□□ -0.69
CPNE1-225ENST00000483495 RARRES2Q99969 163 aa10.71□□□□□ -0.69
CPNE1-225ENST00000483495 SSBP3Q9BWW4 388 aaPredicted RBP10.71□□□□□ -0.69
CPNE1-225ENST00000483495 NDUFA4L2Q9NRX3 87 aa10.71□□□□□ -0.69
CPNE1-225ENST00000483495 LY6LH3BQJ8 138 aa10.7□□□□□ -0.7
CPNE1-225ENST00000483495 M0R1W7 72 aa10.7□□□□□ -0.7
CPNE1-225ENST00000483495 GOSR1O95249 250 aa10.7□□□□□ -0.7
CPNE1-225ENST00000483495 IFNA4P05014 189 aa10.7□□□□□ -0.7
CPNE1-225ENST00000483495 EFNA4P52798 201 aa10.7□□□□□ -0.7
CPNE1-225ENST00000483495 DLX1P56177 255 aa10.7□□□□□ -0.7
CPNE1-225ENST00000483495 ZNF787Q6DD87 383 aa10.7□□□□□ -0.7
CPNE1-225ENST00000483495 AMMECR1Q9Y4X0 333 aaPredicted RBP10.7□□□□□ -0.7
CPNE1-225ENST00000483495 LOC105371242A0A075B767 164 aa10.7□□□□□ -0.7
CPNE1-225ENST00000483495 HSPB1P04792 205 aaKnown RBP10.7□□□□□ -0.7
CPNE1-225ENST00000483495 GPR6P46095 362 aaPredicted RBP10.7□□□□□ -0.7
CPNE1-225ENST00000483495 ICAM4Q14773 271 aa10.7□□□□□ -0.7
CPNE1-225ENST00000483495 C2orf83Q53S99 150 aa10.7□□□□□ -0.7
CPNE1-225ENST00000483495 KHDC3LQ587J8 217 aa10.7□□□□□ -0.7
CPNE1-225ENST00000483495 FFAR4Q5NUL3 377 aa10.7□□□□□ -0.7
CPNE1-225ENST00000483495 OR1L8Q8NGR8 309 aa10.7□□□□□ -0.7
CPNE1-225ENST00000483495 HINT2Q9BX68 163 aa10.7□□□□□ -0.7
CPNE1-225ENST00000483495 COMMD5Q9GZQ3 224 aa10.7□□□□□ -0.7
CPNE1-225ENST00000483495 ONECUT1Q9UBC0 465 aa10.7□□□□□ -0.7
CPNE1-225ENST00000483495 LSM4Q9Y4Z0 139 aaKnown RBP10.7□□□□□ -0.7
CPNE1-225ENST00000483495 SPTBN1Q01082 2364 aaKnown RBP10.7□□□□□ -0.7
CPNE1-225ENST00000483495 LRBAP50851 2863 aa10.69□□□□□ -0.7
CPNE1-225ENST00000483495 IGHV1-3A0A0C4DH29 117 aa10.69□□□□□ -0.7
CPNE1-225ENST00000483495 MAP1LC3B2A6NCE7 125 aa10.69□□□□□ -0.7
CPNE1-225ENST00000483495 OVOL3O00110 214 aa10.69□□□□□ -0.7
CPNE1-225ENST00000483495 NPBWR1P48145 328 aa10.69□□□□□ -0.7
CPNE1-225ENST00000483495 VMA21Q3ZAQ7 101 aa10.69□□□□□ -0.7
CPNE1-225ENST00000483495 LCN15Q6UWW0 184 aa10.69□□□□□ -0.7
CPNE1-225ENST00000483495 CLRN3Q8NCR9 226 aa10.69□□□□□ -0.7
CPNE1-225ENST00000483495 OR11H6Q8NGC7 330 aa10.69□□□□□ -0.7
CPNE1-225ENST00000483495 OR10G4Q8NGN3 311 aa10.69□□□□□ -0.7
CPNE1-225ENST00000483495 OR10G9Q8NGN4 311 aa10.69□□□□□ -0.7
CPNE1-225ENST00000483495 OR10G7Q8NGN6 311 aa10.69□□□□□ -0.7
CPNE1-225ENST00000483495 C1orf159Q96HA4 380 aa10.69□□□□□ -0.7
CPNE1-225ENST00000483495 MAP1LC3BQ9GZQ8 125 aa10.69□□□□□ -0.7
CPNE1-225ENST00000483495 NPVFQ9HCQ7 196 aa10.69□□□□□ -0.7
CPNE1-225ENST00000483495 CTXND1A0A1B0GTU2 59 aa10.68□□□□□ -0.7
CPNE1-225ENST00000483495 LOC102723971A0A1B0GUV8 181 aa10.68□□□□□ -0.7
CPNE1-225ENST00000483495 FAM74A7A6NL05 159 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms