RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 TM2D2Q9BX73 214 aa6.54□□□□□ -1.36
COL4A5-205ENST00000483338 TMEM191AQ9H0A3 160 aa6.54□□□□□ -1.36
COL4A5-205ENST00000483338 HRASLS2Q9NWW9 162 aa6.54□□□□□ -1.36
COL4A5-205ENST00000483338 VPREB3Q9UKI3 123 aa6.54□□□□□ -1.36
COL4A5-205ENST00000483338 RALYQ9UKM9 306 aaKnown RBP6.54□□□□□ -1.36
COL4A5-205ENST00000483338 CYSLTR1Q9Y271 337 aa6.54□□□□□ -1.36
COL4A5-205ENST00000483338 TTC28Q96AY4 2481 aa6.54□□□□□ -1.36
COL4A5-205ENST00000483338 A4D1N5 150 aa6.54□□□□□ -1.36
COL4A5-205ENST00000483338 CLDN14O95500 239 aa6.54□□□□□ -1.36
COL4A5-205ENST00000483338 VDAC2P45880 294 aaPredicted RBP6.54□□□□□ -1.36
COL4A5-205ENST00000483338 CEACAM16Q2WEN9 425 aa6.54□□□□□ -1.36
COL4A5-205ENST00000483338 Q6ZPA2 131 aa6.54□□□□□ -1.36
COL4A5-205ENST00000483338 DGAT2L6Q6ZPD8 337 aa6.54□□□□□ -1.36
COL4A5-205ENST00000483338 ZNF818PQ6ZRF7 136 aa6.54□□□□□ -1.36
COL4A5-205ENST00000483338 SFTPA1Q8IWL2 248 aa6.54□□□□□ -1.36
COL4A5-205ENST00000483338 SPEM1Q8N4L4 309 aa6.54□□□□□ -1.36
COL4A5-205ENST00000483338 TMEM52Q8NDY8 209 aa6.54□□□□□ -1.36
COL4A5-205ENST00000483338 GGTLC1Q9BX51 225 aa6.54□□□□□ -1.36
COL4A5-205ENST00000483338 KLF7O75840 302 aaPredicted RBP6.54□□□□□ -1.36
COL4A5-205ENST00000483338 NHLRC4P0CG21 123 aaPredicted RBP6.54□□□□□ -1.36
COL4A5-205ENST00000483338 MGST1P10620 155 aaKnown RBP6.54□□□□□ -1.36
COL4A5-205ENST00000483338 CD38P28907 300 aa6.54□□□□□ -1.36
COL4A5-205ENST00000483338 DAP3P51398 398 aaKnown RBP6.54□□□□□ -1.36
COL4A5-205ENST00000483338 SLC38A11Q08AI6 406 aa6.54□□□□□ -1.36
COL4A5-205ENST00000483338 GCSAMQ8N6F7 178 aa6.54□□□□□ -1.36
COL4A5-205ENST00000483338 PP6455Q8WZ26 134 aa6.54□□□□□ -1.36
COL4A5-205ENST00000483338 Q96M66 194 aa6.54□□□□□ -1.36
COL4A5-205ENST00000483338 PPDPFQ9H3Y8 114 aa6.54□□□□□ -1.36
COL4A5-205ENST00000483338 SYNGR2O43760 224 aa6.53□□□□□ -1.36
COL4A5-205ENST00000483338 ANGPTL7O43827 346 aa6.53□□□□□ -1.36
COL4A5-205ENST00000483338 SP9P0CG40 484 aa6.53□□□□□ -1.36
COL4A5-205ENST00000483338 FGF6P10767 208 aa6.53□□□□□ -1.36
COL4A5-205ENST00000483338 HLA-DOBP13765 273 aa6.53□□□□□ -1.36
COL4A5-205ENST00000483338 P2RY2P41231 377 aa6.53□□□□□ -1.36
COL4A5-205ENST00000483338 XGP55808 180 aa6.53□□□□□ -1.36
COL4A5-205ENST00000483338 RPL8P62917 257 aaKnown RBP6.53□□□□□ -1.36
COL4A5-205ENST00000483338 TFF2Q03403 129 aa6.53□□□□□ -1.36
COL4A5-205ENST00000483338 VWC2Q2TAL6 325 aa6.53□□□□□ -1.36
COL4A5-205ENST00000483338 GAPTQ8N292 157 aa6.53□□□□□ -1.36
COL4A5-205ENST00000483338 TSACCQ96A04 125 aaPredicted RBP6.53□□□□□ -1.36
COL4A5-205ENST00000483338 PMCHL2Q9BQD1 86 aa6.53□□□□□ -1.36
COL4A5-205ENST00000483338 A0A087WX48 190 aa6.53□□□□□ -1.36
COL4A5-205ENST00000483338 IGKV1D-43A0A0B4J1Z2 117 aa6.53□□□□□ -1.36
COL4A5-205ENST00000483338 NPIPB5A8MRT5 1133 aa6.53□□□□□ -1.36
COL4A5-205ENST00000483338 F8W1H4 67 aa6.53□□□□□ -1.36
COL4A5-205ENST00000483338 COX5AP20674 150 aa6.53□□□□□ -1.36
COL4A5-205ENST00000483338 SPANXN5Q5MJ07 72 aa6.53□□□□□ -1.36
COL4A5-205ENST00000483338 TMEM215Q68D42 235 aa6.53□□□□□ -1.36
COL4A5-205ENST00000483338 HOXB13Q92826 284 aaPredicted RBP6.53□□□□□ -1.36
COL4A5-205ENST00000483338 GCM1Q9NP62 436 aa6.53□□□□□ -1.36
COL4A5-205ENST00000483338 THADAQ6YHU6 1953 aa6.53□□□□□ -1.36
COL4A5-205ENST00000483338 ZDBF2Q9HCK1 2354 aa6.53□□□□□ -1.36
COL4A5-205ENST00000483338 FAM90A27PA6NNH2 459 aa6.52□□□□□ -1.36
COL4A5-205ENST00000483338 CATR1Q13166 79 aa6.52□□□□□ -1.36
COL4A5-205ENST00000483338 C1orf61Q13536 156 aa6.52□□□□□ -1.36
COL4A5-205ENST00000483338 KLF5Q13887 457 aaPredicted RBP6.52□□□□□ -1.36
COL4A5-205ENST00000483338 FXYD3Q14802 87 aa6.52□□□□□ -1.36
COL4A5-205ENST00000483338 ALKBH6Q3KRA9 238 aa6.52□□□□□ -1.36
COL4A5-205ENST00000483338 TIGITQ495A1 244 aa6.52□□□□□ -1.36
COL4A5-205ENST00000483338 Q6ZUT4 128 aa6.52□□□□□ -1.36
COL4A5-205ENST00000483338 VN1R4Q7Z5H5 301 aa6.52□□□□□ -1.36
COL4A5-205ENST00000483338 OR1L1Q8NH94 360 aa6.52□□□□□ -1.36
COL4A5-205ENST00000483338 OSR1Q8TAX0 266 aaPredicted RBP6.52□□□□□ -1.36
COL4A5-205ENST00000483338 TXNIPQ9H3M7 391 aa6.52□□□□□ -1.36
COL4A5-205ENST00000483338 DIDO1Q9BTC0 2240 aaKnown RBP6.52□□□□□ -1.37
COL4A5-205ENST00000483338 B3GALT2O43825 422 aa6.52□□□□□ -1.37
COL4A5-205ENST00000483338 IGHV3-7P01780 117 aa6.52□□□□□ -1.37
COL4A5-205ENST00000483338 GNG3P63215 75 aa6.52□□□□□ -1.37
COL4A5-205ENST00000483338 TFF3Q07654 80 aa6.52□□□□□ -1.37
COL4A5-205ENST00000483338 FHL3Q13643 280 aa6.52□□□□□ -1.37
COL4A5-205ENST00000483338 ANXA2RQ3ZCQ2 193 aa6.52□□□□□ -1.37
COL4A5-205ENST00000483338 TIMM23BQ5SRD1 257 aa6.52□□□□□ -1.37
COL4A5-205ENST00000483338 PARM1Q6UWI2 310 aa6.52□□□□□ -1.37
COL4A5-205ENST00000483338 MAFAQ8NHW3 353 aaPredicted RBP6.52□□□□□ -1.37
COL4A5-205ENST00000483338 TMEM54Q969K7 222 aa6.52□□□□□ -1.37
COL4A5-205ENST00000483338 SYNGR1O43759 233 aa6.52□□□□□ -1.37
COL4A5-205ENST00000483338 WISP1O95388 367 aa6.52□□□□□ -1.37
COL4A5-205ENST00000483338 FCGR2AP12318 317 aa6.52□□□□□ -1.37
COL4A5-205ENST00000483338 PRTN3P24158 256 aa6.52□□□□□ -1.37
COL4A5-205ENST00000483338 GRB2P62993 217 aaKnown RBP6.52□□□□□ -1.37
COL4A5-205ENST00000483338 GCSAMLQ5JQS6 135 aa6.52□□□□□ -1.37
COL4A5-205ENST00000483338 SYT8Q8NBV8 401 aa6.52□□□□□ -1.37
COL4A5-205ENST00000483338 LRRC29Q8WV35 223 aa6.52□□□□□ -1.37
COL4A5-205ENST00000483338 RPP25Q9BUL9 199 aaKnown RBP6.52□□□□□ -1.37
COL4A5-205ENST00000483338 RNASE7Q9H1E1 156 aaKnown RBP6.52□□□□□ -1.37
COL4A5-205ENST00000483338 ARL4DP49703 201 aa6.51□□□□□ -1.37
COL4A5-205ENST00000483338 PDLIM3Q53GG5 364 aaPredicted RBP6.51□□□□□ -1.37
COL4A5-205ENST00000483338 FAM69BQ5VUD6 431 aa6.51□□□□□ -1.37
COL4A5-205ENST00000483338 Q6ZNB5 142 aa6.51□□□□□ -1.37
COL4A5-205ENST00000483338 SSX8Q7RTT4 187 aa6.51□□□□□ -1.37
COL4A5-205ENST00000483338 PRDM6Q9NQX0 595 aa6.51□□□□□ -1.37
COL4A5-205ENST00000483338 IGHV1-24A0A0C4DH33 117 aa6.51□□□□□ -1.37
COL4A5-205ENST00000483338 A0A1W2PQU0 124 aa6.51□□□□□ -1.37
COL4A5-205ENST00000483338 LRRC30A6NM36 301 aa6.51□□□□□ -1.37
COL4A5-205ENST00000483338 HRKO00198 91 aa6.51□□□□□ -1.37
COL4A5-205ENST00000483338 NRG2O14511 850 aaPredicted RBP6.51□□□□□ -1.37
COL4A5-205ENST00000483338 NTF4P34130 210 aa6.51□□□□□ -1.37
COL4A5-205ENST00000483338 RPL31P62899 125 aaKnown RBP6.51□□□□□ -1.37
COL4A5-205ENST00000483338 H1FXQ92522 213 aaKnown RBP6.51□□□□□ -1.37
COL4A5-205ENST00000483338 SAP30LQ9HAJ7 183 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms