RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 CROCCP3Q8IVE0 287 aa10.38□□□□□ -0.75
VARS-226ENST00000483275 PUSL1Q8N0Z8 303 aaKnown RBP10.38□□□□□ -0.75
VARS-226ENST00000483275 OR4S2Q8NH73 311 aa10.38□□□□□ -0.75
VARS-226ENST00000483275 TMEM167AQ8TBQ9 72 aa10.38□□□□□ -0.75
VARS-226ENST00000483275 EEF1AKMT3Q96AZ1 226 aa10.38□□□□□ -0.75
VARS-226ENST00000483275 YIPF6Q96EC8 236 aa10.38□□□□□ -0.75
VARS-226ENST00000483275 OR2A7Q96R45 310 aa10.38□□□□□ -0.75
VARS-226ENST00000483275 SLC2A9Q9NRM0 540 aa10.38□□□□□ -0.75
VARS-226ENST00000483275 LOC102724200A0A096LPH7 203 aaPredicted RBP10.37□□□□□ -0.75
VARS-226ENST00000483275 A8MWP6 167 aa10.37□□□□□ -0.75
VARS-226ENST00000483275 SSX5O60225 188 aa10.37□□□□□ -0.75
VARS-226ENST00000483275 TMEM127O75204 238 aa10.37□□□□□ -0.75
VARS-226ENST00000483275 HLA-DQB1P01920 261 aa10.37□□□□□ -0.75
VARS-226ENST00000483275 DTYMKP23919 212 aa10.37□□□□□ -0.75
VARS-226ENST00000483275 PSMB6P28072 239 aa10.37□□□□□ -0.75
VARS-226ENST00000483275 GPR183P32249 361 aa10.37□□□□□ -0.75
VARS-226ENST00000483275 SCAND1P57086 179 aa10.37□□□□□ -0.75
VARS-226ENST00000483275 LSM3P62310 102 aaKnown RBP10.37□□□□□ -0.75
VARS-226ENST00000483275 DEFB135Q30KP9 77 aa10.37□□□□□ -0.75
VARS-226ENST00000483275 GPHB5Q86YW7 130 aa10.37□□□□□ -0.75
VARS-226ENST00000483275 LGALS14Q8TCE9 139 aa10.37□□□□□ -0.75
VARS-226ENST00000483275 ETV7Q9Y603 341 aa10.37□□□□□ -0.75
VARS-226ENST00000483275 IGHV3OR16-8A0A075B7F1 116 aa10.36□□□□□ -0.75
VARS-226ENST00000483275 TRAV3A0A0B4J244 114 aa10.36□□□□□ -0.75
VARS-226ENST00000483275 FCER2P06734 321 aa10.36□□□□□ -0.75
VARS-226ENST00000483275 CTRB1P17538 263 aa10.36□□□□□ -0.75
VARS-226ENST00000483275 ZNF585BQ52M93 769 aa10.36□□□□□ -0.75
VARS-226ENST00000483275 HACD4Q5VWC8 232 aa10.36□□□□□ -0.75
VARS-226ENST00000483275 CTRB2Q6GPI1 263 aa10.36□□□□□ -0.75
VARS-226ENST00000483275 MRPS26Q9BYN8 205 aaKnown RBP10.36□□□□□ -0.75
VARS-226ENST00000483275 IGLV11-55A0A075B6I3 123 aa10.35□□□□□ -0.75
VARS-226ENST00000483275 S1PR2O95136 353 aa10.35□□□□□ -0.75
VARS-226ENST00000483275 CLEC3BP05452 202 aa10.35□□□□□ -0.75
VARS-226ENST00000483275 CRYGCP07315 174 aa10.35□□□□□ -0.75
VARS-226ENST00000483275 DEFA4P12838 97 aa10.35□□□□□ -0.75
VARS-226ENST00000483275 RPA2P15927 270 aa10.35□□□□□ -0.75
VARS-226ENST00000483275 HLA-GP17693 338 aa10.35□□□□□ -0.75
VARS-226ENST00000483275 RPL8P62917 257 aaKnown RBP10.35□□□□□ -0.75
VARS-226ENST00000483275 FAM106AQ4KMX7 169 aa10.35□□□□□ -0.75
VARS-226ENST00000483275 FAM209BQ5JX69 171 aa10.35□□□□□ -0.75
VARS-226ENST00000483275 OR4A47Q6IF82 309 aa10.35□□□□□ -0.75
VARS-226ENST00000483275 LYG2Q86SG7 212 aa10.35□□□□□ -0.75
VARS-226ENST00000483275 MFSD4AQ8N468 514 aa10.35□□□□□ -0.75
VARS-226ENST00000483275 RPP25LQ8N5L8 163 aaKnown RBP10.35□□□□□ -0.75
VARS-226ENST00000483275 OR1L6Q8NGR2 347 aa10.35□□□□□ -0.75
VARS-226ENST00000483275 SECTM1Q8WVN6 248 aa10.35□□□□□ -0.75
VARS-226ENST00000483275 HSD17B10Q99714 261 aaKnown RBP10.35□□□□□ -0.75
VARS-226ENST00000483275 FUNDC2Q9BWH2 189 aa10.35□□□□□ -0.75
VARS-226ENST00000483275 HRASLSQ9HDD0 168 aa10.35□□□□□ -0.75
VARS-226ENST00000483275 CCL28Q9NRJ3 127 aa10.35□□□□□ -0.75
VARS-226ENST00000483275 RHBDL2Q9NX52 303 aa10.35□□□□□ -0.75
VARS-226ENST00000483275 DNAH10Q8IVF4 4471 aa10.34□□□□□ -0.75
VARS-226ENST00000483275 HECTD4Q9Y4D8 3996 aa10.34□□□□□ -0.75
VARS-226ENST00000483275 IGHV3-21A0A0B4J1V1 117 aa10.34□□□□□ -0.75
VARS-226ENST00000483275 RPL35AP18077 110 aaKnown RBP10.34□□□□□ -0.75
VARS-226ENST00000483275 GNG2P59768 71 aa10.34□□□□□ -0.75
VARS-226ENST00000483275 OR13F1Q8NGS4 319 aa10.34□□□□□ -0.75
VARS-226ENST00000483275 VSTM2AQ8TAG5 236 aa10.34□□□□□ -0.75
VARS-226ENST00000483275 DIABLOQ9NR28 239 aa10.34□□□□□ -0.75
VARS-226ENST00000483275 IGLC7A0M8Q6 106 aa10.33□□□□□ -0.76
VARS-226ENST00000483275 SULT1C2O00338 296 aa10.33□□□□□ -0.76
VARS-226ENST00000483275 ZNF207O43670 478 aaKnown RBP10.33□□□□□ -0.76
VARS-226ENST00000483275 DEDDO75618 318 aa10.33□□□□□ -0.76
VARS-226ENST00000483275 MAS1LP35410 378 aa10.33□□□□□ -0.76
VARS-226ENST00000483275 TGFBR1P36897 503 aa10.33□□□□□ -0.76
VARS-226ENST00000483275 OR2B8PP59922 312 aa10.33□□□□□ -0.76
VARS-226ENST00000483275 CNIH2Q6PI25 160 aa10.33□□□□□ -0.76
VARS-226ENST00000483275 RBPMS2Q6ZRY4 209 aaKnown RBP10.33□□□□□ -0.76
VARS-226ENST00000483275 GPR141Q7Z602 305 aa10.33□□□□□ -0.76
VARS-226ENST00000483275 GVQW1Q8N7I0 195 aa10.33□□□□□ -0.76
VARS-226ENST00000483275 OR10W1Q8NGF6 305 aa10.33□□□□□ -0.76
VARS-226ENST00000483275 ZNF502Q8TBZ5 544 aa10.33□□□□□ -0.76
VARS-226ENST00000483275 ANXA10Q9UJ72 324 aa10.33□□□□□ -0.76
VARS-226ENST00000483275 A0A0A6YYH2 397 aa10.32□□□□□ -0.76
VARS-226ENST00000483275 TRBV7-1A0A0A6YYK4 115 aa10.32□□□□□ -0.76
VARS-226ENST00000483275 NUPR2A6NF83 97 aa10.32□□□□□ -0.76
VARS-226ENST00000483275 OR2T8A6NH00 312 aa10.32□□□□□ -0.76
VARS-226ENST00000483275 A6NJ64 397 aa10.32□□□□□ -0.76
VARS-226ENST00000483275 SPRY2O43597 315 aa10.32□□□□□ -0.76
VARS-226ENST00000483275 DHFRP00374 187 aa10.32□□□□□ -0.76
VARS-226ENST00000483275 CTXN2P0C2S0 81 aa10.32□□□□□ -0.76
VARS-226ENST00000483275 SMIM18P0DKX4 95 aa10.32□□□□□ -0.76
VARS-226ENST00000483275 RPS19P39019 145 aaKnown RBP10.32□□□□□ -0.76
VARS-226ENST00000483275 FXYD4P59646 89 aa10.32□□□□□ -0.76
VARS-226ENST00000483275 ARPC4P59998 168 aa10.32□□□□□ -0.76
VARS-226ENST00000483275 VBP1P61758 197 aa10.32□□□□□ -0.76
VARS-226ENST00000483275 ODF3L2Q3SX64 289 aa10.32□□□□□ -0.76
VARS-226ENST00000483275 PLET1Q6UQ28 207 aa10.32□□□□□ -0.76
VARS-226ENST00000483275 SPAG16Q8N0X2 631 aa10.32□□□□□ -0.76
VARS-226ENST00000483275 OR5H6Q8NGV6 325 aa10.32□□□□□ -0.76
VARS-226ENST00000483275 TRAV18A0A075B6X5 111 aa10.31□□□□□ -0.76
VARS-226ENST00000483275 SLC22A5O76082 557 aa10.31□□□□□ -0.76
VARS-226ENST00000483275 HRASP01112 189 aa10.31□□□□□ -0.76
VARS-226ENST00000483275 C8orf88P0DMB2 117 aa10.31□□□□□ -0.76
VARS-226ENST00000483275 HIST1H1BP16401 226 aaKnown RBP10.31□□□□□ -0.76
VARS-226ENST00000483275 FCGR2BP31994 310 aaPredicted RBP10.31□□□□□ -0.76
VARS-226ENST00000483275 FCGR2CP31995 323 aa10.31□□□□□ -0.76
VARS-226ENST00000483275 NCS1P62166 190 aa10.31□□□□□ -0.76
VARS-226ENST00000483275 ZNF124Q15973 351 aa10.31□□□□□ -0.76
VARS-226ENST00000483275 ANKRD55Q3KP44 614 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms