RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 TCTAP57738 103 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 RAB5BP61020 215 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 RUNX1Q01196 453 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 SURF2Q15527 256 aaPredicted RBP2.24□□□□□ -2.05
SF3B1-210ENST00000482158 SDIM1Q6ZPB5 146 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 GRINAQ7Z429 371 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 ZBTB8OSQ8IWT0 167 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 ST6GALNAC3Q8NDV1 305 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 OR13C6PQ8NH95 151 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 GRPEL2Q8TAA5 225 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 TAMM41Q96BW9 452 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 PPP1R2P1Q96PQ5 205 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 KIFC1Q9BW19 673 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 AICDAQ9GZX7 198 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 TPT1P8Q9HAU6 139 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 LRTM1Q9HBL6 345 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 CCL26Q9Y258 94 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 ANGPT4Q9Y264 503 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 UTP11Q9Y3A2 253 aaKnown RBP2.24□□□□□ -2.05
SF3B1-210ENST00000482158 WASHC3Q9Y3C0 194 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 NALCNQ8IZF0 1738 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 MYH7P12883 1935 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 DOCK5Q9H7D0 1870 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 DSCAML1Q8TD84 2053 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 ZCCHC11Q5TAX3 1644 aaKnown RBP2.24□□□□□ -2.05
SF3B1-210ENST00000482158 KIF13BQ9NQT8 1826 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 CLUHO75153 1309 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 GRIN2BQ13224 1484 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 OR4C46A6NHA9 309 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 K7EQS6 105 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 PDE6DO43924 150 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 MFSD11O43934 449 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 OR2J2O76002 312 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 COX4I1P13073 169 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 IFI30P13284 250 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 GPX2P18283 190 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 GADD45AP24522 165 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 OR1E2P47887 323 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 GABARAPL2P60520 117 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 RHOBP62745 196 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 HIST1H3AP68431 136 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 H3F3AP84243 136 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 CDK10Q15131 360 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 RSU1Q15404 277 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 TMEM78Q5T7P6 136 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 HIST2H3AQ71DI3 136 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 ANGPTL5Q86XS5 388 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 DOLPP1Q86YN1 238 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 C1orf158Q8N1D5 194 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 SLC35F6Q8N357 371 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 Q8NDZ9 215 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 SKA2Q8WVK7 121 aaPredicted RBP2.23□□□□□ -2.05
SF3B1-210ENST00000482158 GTSF1LQ9H1H1 148 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 RASL12Q9NYN1 266 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 DOK5Q9P104 306 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 JPT1Q9UK76 154 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 POLR1DQ9Y2S0 133 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 CACNA1GO43497 2377 aa2.23□□□□□ -2.05
SF3B1-210ENST00000482158 COL5A3P25940 1745 aaPredicted RBP2.22□□□□□ -2.05
SF3B1-210ENST00000482158 FOCADQ5VW36 1801 aa2.22□□□□□ -2.05
SF3B1-210ENST00000482158 A2MP01023 1474 aa2.22□□□□□ -2.05
SF3B1-210ENST00000482158 MYH11P35749 1972 aa2.22□□□□□ -2.05
SF3B1-210ENST00000482158 ODF3BA8MYP8 253 aa2.22□□□□□ -2.05
SF3B1-210ENST00000482158 H3BSA7 217 aa2.22□□□□□ -2.05
SF3B1-210ENST00000482158 ORC5O43913 435 aa2.22□□□□□ -2.05
SF3B1-210ENST00000482158 SULT1C4O75897 302 aa2.22□□□□□ -2.05
SF3B1-210ENST00000482158 REG1AP05451 166 aa2.22□□□□□ -2.05
SF3B1-210ENST00000482158 BPGMP07738 259 aa2.22□□□□□ -2.05
SF3B1-210ENST00000482158 CXCL3P19876 107 aa2.22□□□□□ -2.05
SF3B1-210ENST00000482158 CA5AP35218 305 aa2.22□□□□□ -2.05
SF3B1-210ENST00000482158 RAB13P51153 203 aa2.22□□□□□ -2.05
SF3B1-210ENST00000482158 DNAJB13P59910 316 aa2.22□□□□□ -2.05
SF3B1-210ENST00000482158 GTF2BQ00403 316 aa2.22□□□□□ -2.05
SF3B1-210ENST00000482158 HTR4Q13639 388 aa2.22□□□□□ -2.05
SF3B1-210ENST00000482158 ACOT6Q3I5F7 207 aaPredicted RBP2.22□□□□□ -2.05
SF3B1-210ENST00000482158 TMEM128Q5BJH2 165 aa2.22□□□□□ -2.05
SF3B1-210ENST00000482158 SAMD13Q5VXD3 122 aa2.22□□□□□ -2.05
SF3B1-210ENST00000482158 TEX36Q5VZQ5 186 aa2.22□□□□□ -2.05
SF3B1-210ENST00000482158 TOMM20LQ6UXN7 152 aa2.22□□□□□ -2.05
SF3B1-210ENST00000482158 DIRAS2Q96HU8 199 aa2.22□□□□□ -2.05
SF3B1-210ENST00000482158 UPK3BQ9BT76 320 aa2.22□□□□□ -2.05
SF3B1-210ENST00000482158 C1QTNF6Q9BXI9 259 aa2.22□□□□□ -2.05
SF3B1-210ENST00000482158 CCDC90BQ9GZT6 254 aa2.22□□□□□ -2.05
SF3B1-210ENST00000482158 C16orf95Q9H693 158 aa2.22□□□□□ -2.05
SF3B1-210ENST00000482158 SOGA1O94964 1423 aa2.22□□□□□ -2.05
SF3B1-210ENST00000482158 RB1CC1Q8TDY2 1594 aa2.22□□□□□ -2.05
SF3B1-210ENST00000482158 PHLPP1O60346 1717 aa2.22□□□□□ -2.05
SF3B1-210ENST00000482158 FAM135AQ9P2D6 1515 aa2.22□□□□□ -2.05
SF3B1-210ENST00000482158 COL11A1P12107 1806 aaPredicted RBP2.21□□□□□ -2.05
SF3B1-210ENST00000482158 PQLC2LA1A4F0 135 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 C9orf170A2RU37 121 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 M0QYV0 167 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 SLC17A3O00476 420 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 FAAHO00519 579 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 TXNDC9O14530 226 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 IFNA10P01566 189 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 IFNGP01579 166 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 C1QCP02747 245 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 IL3P08700 152 aa2.21□□□□□ -2.06
SF3B1-210ENST00000482158 OR5G3P0C626 314 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms