RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 ZNF506Q5JVG8 444 aa12.84□□□□□ -0.35
RXRA-202ENST00000481739 OR4A5Q8NH83 315 aa12.84□□□□□ -0.35
RXRA-202ENST00000481739 RAB1CQ92928 201 aa12.84□□□□□ -0.35
RXRA-202ENST00000481739 KCNIP2Q9NS61 270 aa12.84□□□□□ -0.35
RXRA-202ENST00000481739 AKAP6Q13023 2319 aa12.84□□□□□ -0.35
RXRA-202ENST00000481739 FNDC10F2Z333 226 aa12.83□□□□□ -0.35
RXRA-202ENST00000481739 DNASE2O00115 360 aaPredicted RBP12.83□□□□□ -0.35
RXRA-202ENST00000481739 CD1BP29016 333 aa12.83□□□□□ -0.35
RXRA-202ENST00000481739 MC5RP33032 325 aa12.83□□□□□ -0.35
RXRA-202ENST00000481739 KHDC3LQ587J8 217 aa12.83□□□□□ -0.35
RXRA-202ENST00000481739 AVPI1Q5T686 147 aa12.83□□□□□ -0.35
RXRA-202ENST00000481739 ETV3LQ6ZN32 361 aa12.83□□□□□ -0.35
RXRA-202ENST00000481739 OR8B3Q8NGG8 313 aa12.83□□□□□ -0.35
RXRA-202ENST00000481739 OR4C13Q8NGP0 309 aa12.83□□□□□ -0.35
RXRA-202ENST00000481739 ST6GALNAC6Q969X2 333 aa12.83□□□□□ -0.35
RXRA-202ENST00000481739 OR8B2Q96RD0 313 aa12.83□□□□□ -0.35
RXRA-202ENST00000481739 NPCDR1Q9BY65 106 aa12.83□□□□□ -0.35
RXRA-202ENST00000481739 MRPL20Q9BYC9 149 aaKnown RBP12.83□□□□□ -0.35
RXRA-202ENST00000481739 TMEM133Q9H2Q1 129 aa12.83□□□□□ -0.35
RXRA-202ENST00000481739 WDR83OSQ9Y284 106 aa12.83□□□□□ -0.35
RXRA-202ENST00000481739 TENM4Q6N022 2769 aa12.83□□□□□ -0.36
RXRA-202ENST00000481739 TRAV3A0A0B4J244 114 aa12.83□□□□□ -0.36
RXRA-202ENST00000481739 KBTBD11O94819 623 aa12.83□□□□□ -0.36
RXRA-202ENST00000481739 TAGLN2P37802 199 aaKnown RBP12.83□□□□□ -0.36
RXRA-202ENST00000481739 PRCDQ00LT1 54 aa12.83□□□□□ -0.36
RXRA-202ENST00000481739 SPINK9Q5DT21 86 aa12.83□□□□□ -0.36
RXRA-202ENST00000481739 ZNF841Q6ZN19 808 aa12.83□□□□□ -0.36
RXRA-202ENST00000481739 ABHD12Q8N2K0 398 aa12.83□□□□□ -0.36
RXRA-202ENST00000481739 CLRN3Q8NCR9 226 aa12.83□□□□□ -0.36
RXRA-202ENST00000481739 SLC24A4Q8NFF2 622 aa12.83□□□□□ -0.36
RXRA-202ENST00000481739 OR10G4Q8NGN3 311 aa12.83□□□□□ -0.36
RXRA-202ENST00000481739 FLYWCH2Q96CP2 140 aaKnown RBP12.83□□□□□ -0.36
RXRA-202ENST00000481739 NEIL1Q96FI4 390 aaPredicted RBP12.83□□□□□ -0.36
RXRA-202ENST00000481739 RCC1LQ96I51 464 aaKnown RBP12.83□□□□□ -0.36
RXRA-202ENST00000481739 OR51B2Q9Y5P1 312 aa12.83□□□□□ -0.36
RXRA-202ENST00000481739 H7C2Y5 167 aa12.82□□□□□ -0.36
RXRA-202ENST00000481739 NDUFS7O75251 213 aa12.82□□□□□ -0.36
RXRA-202ENST00000481739 F12P00748 615 aaPredicted RBP12.82□□□□□ -0.36
RXRA-202ENST00000481739 IFNA1P01562 189 aa12.82□□□□□ -0.36
RXRA-202ENST00000481739 IGKV1-16P04430 117 aa12.82□□□□□ -0.36
RXRA-202ENST00000481739 ZNF787Q6DD87 383 aa12.82□□□□□ -0.36
RXRA-202ENST00000481739 CLDND2Q8NHS1 167 aa12.82□□□□□ -0.36
RXRA-202ENST00000481739 LHX4Q969G2 390 aa12.82□□□□□ -0.36
RXRA-202ENST00000481739 HARBI1Q96MB7 349 aa12.82□□□□□ -0.36
RXRA-202ENST00000481739 CCL19Q99731 98 aa12.82□□□□□ -0.36
RXRA-202ENST00000481739 NABP2Q9BQ15 211 aa12.82□□□□□ -0.36
RXRA-202ENST00000481739 PLEKHA3Q9HB20 300 aa12.82□□□□□ -0.36
RXRA-202ENST00000481739 WASHC3Q9Y3C0 194 aa12.82□□□□□ -0.36
RXRA-202ENST00000481739 PRSS46E5RG02 174 aa12.81□□□□□ -0.36
RXRA-202ENST00000481739 NDUFS6O75380 124 aaKnown RBP12.81□□□□□ -0.36
RXRA-202ENST00000481739 USF1P22415 310 aaPredicted RBP12.81□□□□□ -0.36
RXRA-202ENST00000481739 NPY1RP25929 384 aa12.81□□□□□ -0.36
RXRA-202ENST00000481739 EFNA4P52798 201 aa12.81□□□□□ -0.36
RXRA-202ENST00000481739 PRRX1P54821 245 aa12.81□□□□□ -0.36
RXRA-202ENST00000481739 CCL20P78556 96 aa12.81□□□□□ -0.36
RXRA-202ENST00000481739 TGIF2LXQ8IUE1 241 aa12.81□□□□□ -0.36
RXRA-202ENST00000481739 CRYBG3Q68DQ2 2970 aa12.81□□□□□ -0.36
RXRA-202ENST00000481739 CTXND1A0A1B0GTU2 59 aa12.81□□□□□ -0.36
RXRA-202ENST00000481739 INS-IGF2F8WCM5 200 aa12.81□□□□□ -0.36
RXRA-202ENST00000481739 TSPAN4O14817 238 aa12.81□□□□□ -0.36
RXRA-202ENST00000481739 SAA1P0DJI8 122 aaPredicted RBP12.81□□□□□ -0.36
RXRA-202ENST00000481739 COL8A1P27658 744 aa12.81□□□□□ -0.36
RXRA-202ENST00000481739 SOHLH1Q5JUK2 328 aa12.81□□□□□ -0.36
RXRA-202ENST00000481739 C11orf42Q8N5U0 333 aa12.81□□□□□ -0.36
RXRA-202ENST00000481739 BEND2Q8NDZ0 799 aa12.81□□□□□ -0.36
RXRA-202ENST00000481739 CHODLQ9H9P2 273 aa12.81□□□□□ -0.36
RXRA-202ENST00000481739 SLC39A9Q9NUM3 307 aa12.81□□□□□ -0.36
RXRA-202ENST00000481739 TACC2O95359 2948 aa12.8□□□□□ -0.36
RXRA-202ENST00000481739 A0A1B0GV50 99 aa12.8□□□□□ -0.36
RXRA-202ENST00000481739 MAP1LC3B2A6NCE7 125 aa12.8□□□□□ -0.36
RXRA-202ENST00000481739 IFNA4P05014 189 aa12.8□□□□□ -0.36
RXRA-202ENST00000481739 NPBWR1P48145 328 aa12.8□□□□□ -0.36
RXRA-202ENST00000481739 ELLP55199 621 aaPredicted RBP12.8□□□□□ -0.36
RXRA-202ENST00000481739 ACOT6Q3I5F7 207 aaPredicted RBP12.8□□□□□ -0.36
RXRA-202ENST00000481739 ACTR3CQ9C0K3 210 aaPredicted RBP12.8□□□□□ -0.36
RXRA-202ENST00000481739 MAP1LC3BQ9GZQ8 125 aa12.8□□□□□ -0.36
RXRA-202ENST00000481739 AMMECR1Q9Y4X0 333 aaPredicted RBP12.8□□□□□ -0.36
RXRA-202ENST00000481739 USP9YO00507 2555 aaPredicted RBP12.79□□□□□ -0.36
RXRA-202ENST00000481739 PPIAL4CA0A0B4J2A2 164 aa12.79□□□□□ -0.36
RXRA-202ENST00000481739 LOC102723971A0A1B0GUV8 181 aa12.79□□□□□ -0.36
RXRA-202ENST00000481739 OVOL3O00110 214 aa12.79□□□□□ -0.36
RXRA-202ENST00000481739 PPIAL4GP0DN37 164 aa12.79□□□□□ -0.36
RXRA-202ENST00000481739 BCL2P10415 239 aa12.79□□□□□ -0.36
RXRA-202ENST00000481739 LGALS7P47929 136 aa12.79□□□□□ -0.36
RXRA-202ENST00000481739 ERVFRD-1P60508 538 aa12.79□□□□□ -0.36
RXRA-202ENST00000481739 RHEBQ15382 184 aa12.79□□□□□ -0.36
RXRA-202ENST00000481739 ZNF726P1Q15940 193 aa12.79□□□□□ -0.36
RXRA-202ENST00000481739 FFAR4Q5NUL3 377 aa12.79□□□□□ -0.36
RXRA-202ENST00000481739 WDR25Q64LD2 544 aaPredicted RBP12.79□□□□□ -0.36
RXRA-202ENST00000481739 RBMS3Q6XE24 437 aaKnown RBP12.79□□□□□ -0.36
RXRA-202ENST00000481739 TMEM167AQ8TBQ9 72 aa12.79□□□□□ -0.36
RXRA-202ENST00000481739 P2RX4Q99571 388 aa12.79□□□□□ -0.36
RXRA-202ENST00000481739 VSIRQ9H7M9 311 aa12.79□□□□□ -0.36
RXRA-202ENST00000481739 ZNRD1Q9P1U0 126 aa12.79□□□□□ -0.36
RXRA-202ENST00000481739 YLPM1P49750 1951 aaKnown RBP12.79□□□□□ -0.36
RXRA-202ENST00000481739 IGHV2-26A0A0B4J1V2 119 aa12.78□□□□□ -0.36
RXRA-202ENST00000481739 FAM74A7A6NL05 159 aa12.78□□□□□ -0.36
RXRA-202ENST00000481739 SRRM4A7MD48 611 aaKnown RBP12.78□□□□□ -0.36
RXRA-202ENST00000481739 RRHO14718 337 aa12.78□□□□□ -0.36
RXRA-202ENST00000481739 CYB5BO43169 146 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms