RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 SLC25A31Q9H0C2 315 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 PCYOX1Q9UHG3 505 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 ZNF225Q9UK10 706 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 SONP18583 2426 aaKnown RBP2.34□□□□□ -2.04
SMC6-208ENST00000481708 IGLV8-61A0A075B6I0 122 aa2.34□□□□□ -2.04
SMC6-208ENST00000481708 TRAV8-2A0A0B4J237 113 aa2.34□□□□□ -2.04
SMC6-208ENST00000481708 A0A0D9SEW6 157 aa2.34□□□□□ -2.04
SMC6-208ENST00000481708 C5orf63A6NC05 138 aa2.34□□□□□ -2.04
SMC6-208ENST00000481708 PRSS44E7EML9 344 aa2.34□□□□□ -2.04
SMC6-208ENST00000481708 SLC31A2O15432 143 aa2.34□□□□□ -2.04
SMC6-208ENST00000481708 ZNF688P0C7X2 276 aa2.34□□□□□ -2.04
SMC6-208ENST00000481708 RBMXP38159 391 aaKnown RBP2.34□□□□□ -2.04
SMC6-208ENST00000481708 OR1E2P47887 323 aa2.34□□□□□ -2.04
SMC6-208ENST00000481708 SPINT3P49223 89 aa2.34□□□□□ -2.04
SMC6-208ENST00000481708 CRADDP78560 199 aa2.34□□□□□ -2.04
SMC6-208ENST00000481708 C1DQ13901 141 aaKnown RBP2.34□□□□□ -2.04
SMC6-208ENST00000481708 CASC10Q5T4H9 136 aa2.34□□□□□ -2.04
SMC6-208ENST00000481708 ZNF343Q6P1L6 599 aa2.34□□□□□ -2.04
SMC6-208ENST00000481708 TMEM35BQ8NCS4 154 aa2.34□□□□□ -2.04
SMC6-208ENST00000481708 OR9A2Q8NGT5 310 aa2.34□□□□□ -2.04
SMC6-208ENST00000481708 OR4S2Q8NH73 311 aa2.34□□□□□ -2.04
SMC6-208ENST00000481708 GRPEL2Q8TAA5 225 aa2.34□□□□□ -2.04
SMC6-208ENST00000481708 FAM57AQ8TBR7 257 aa2.34□□□□□ -2.04
SMC6-208ENST00000481708 LMX1AQ8TE12 382 aa2.34□□□□□ -2.04
SMC6-208ENST00000481708 PITX2Q99697 317 aa2.34□□□□□ -2.04
SMC6-208ENST00000481708 MARVELD1Q9BSK0 173 aa2.34□□□□□ -2.04
SMC6-208ENST00000481708 THTPAQ9BU02 230 aa2.34□□□□□ -2.04
SMC6-208ENST00000481708 DNAJC27Q9NZQ0 273 aa2.34□□□□□ -2.04
SMC6-208ENST00000481708 ABCA4P78363 2273 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 HIVEP1P15822 2718 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 A0A1B0GV90 55 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 A0A1W2PRE2 83 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 KRBOX1C9JBD0 128 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 C1QAP02745 245 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 H2AFZP0C0S5 128 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 CCL4P13236 92 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 GTF2F2P13984 249 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 OMGP23515 440 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 MDH2P40926 338 aaKnown RBP2.33□□□□□ -2.04
SMC6-208ENST00000481708 KRTAP10-9P60411 292 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 RPS24P62847 133 aaKnown RBP2.33□□□□□ -2.04
SMC6-208ENST00000481708 TFAMQ00059 246 aaKnown RBP2.33□□□□□ -2.04
SMC6-208ENST00000481708 ZNF876PQ49A33 203 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 LYPD2Q6UXB3 125 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 VN1R4Q7Z5H5 301 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 RXFP4Q8TDU9 374 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 EBPLQ9BY08 206 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 AICDAQ9GZX7 198 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 HDGFL3Q9Y3E1 203 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 CSPG4Q6UVK1 2322 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 TRAV8-3A0A0A6YYJ7 113 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 MNAT1P51948 309 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 TAS2R19P59542 299 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 LRRC10Q5BKY1 277 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 ZNF773Q6PK81 442 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 ARL9Q6T311 187 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 TNFAIP8L1Q8WVP5 186 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 MAFIPQ8WZ33 124 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 CGREF1Q99674 301 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 TMEM222Q9H0R3 208 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 UQCC1Q9NVA1 299 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 MYO18AQ92614 2054 aaKnown RBP2.33□□□□□ -2.04
SMC6-208ENST00000481708 A0A087WX48 190 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 M0R1X1 148 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 LYPLA1O75608 230 aaPredicted RBP2.33□□□□□ -2.04
SMC6-208ENST00000481708 MYL9P24844 172 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 CRABP2P29373 138 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 OR3A4PP47883 348 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 P2RX1P51575 399 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 LIN52Q52LA3 116 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 PRR30Q53SZ7 412 aaPredicted RBP2.33□□□□□ -2.04
SMC6-208ENST00000481708 TMEM78Q5T7P6 136 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 NCBP2-AS2Q69YL0 99 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 LCN8Q6JVE9 175 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 C20orf203Q8NBC4 194 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 FDCSPQ8NFU4 85 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 C11orf40Q8WZ69 217 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 PTX4Q96A99 478 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 APOBEC3DQ96AK3 386 aaPredicted RBP2.33□□□□□ -2.04
SMC6-208ENST00000481708 DIRAS2Q96HU8 199 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 SMIM8Q96KF7 97 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 GINS3Q9BRX5 216 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 SFXN3Q9BWM7 321 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 GSKIPQ9P0R6 139 aa2.33□□□□□ -2.04
SMC6-208ENST00000481708 LOC389332A0A1B0GUA5 103 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 GYG2O15488 501 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 DAPP51397 102 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 OTPQ5XKR4 325 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 OPN5Q6U736 354 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 SSX8Q7RTT4 187 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 SLC16A13Q7RTY0 426 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 ZNF440Q8IYI8 595 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 Q8N9P0 234 aaPredicted RBP2.32□□□□□ -2.04
SMC6-208ENST00000481708 CHCHD5Q9BSY4 110 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 DEFB108AA8MXU0 73 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 NDUFC2-KCTD14E9PQ53 114 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 OR7C1O76099 320 aaPredicted RBP2.32□□□□□ -2.04
SMC6-208ENST00000481708 PTHP01270 115 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 IGKV1-39P01597 117 aa2.32□□□□□ -2.04
SMC6-208ENST00000481708 IGKV1D-39P04432 117 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms