RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 OR1L6Q8NGR2 347 aa6.57□□□□□ -1.36
SYNE1-225ENST00000481502 OR1S1Q8NH92 325 aa6.57□□□□□ -1.36
SYNE1-225ENST00000481502 PPP1R14BQ96C90 147 aa6.57□□□□□ -1.36
SYNE1-225ENST00000481502 RITA1Q96K30 269 aa6.57□□□□□ -1.36
SYNE1-225ENST00000481502 OR10C1Q96KK4 312 aa6.57□□□□□ -1.36
SYNE1-225ENST00000481502 RAB40CQ96S21 281 aa6.57□□□□□ -1.36
SYNE1-225ENST00000481502 GON7Q9BXV9 100 aa6.57□□□□□ -1.36
SYNE1-225ENST00000481502 NPFFR1Q9GZQ6 430 aa6.57□□□□□ -1.36
SYNE1-225ENST00000481502 NDUFA4L2Q9NRX3 87 aa6.57□□□□□ -1.36
SYNE1-225ENST00000481502 CACNG5Q9UF02 275 aa6.57□□□□□ -1.36
SYNE1-225ENST00000481502 NSD1Q96L73 2696 aaPredicted RBP6.56□□□□□ -1.36
SYNE1-225ENST00000481502 A0A0G2JRQ6 117 aa6.56□□□□□ -1.36
SYNE1-225ENST00000481502 C13orf42A0A1B0GVH6 325 aa6.56□□□□□ -1.36
SYNE1-225ENST00000481502 CYSRT1A8MQ03 144 aa6.56□□□□□ -1.36
SYNE1-225ENST00000481502 INAFM1C9JVW0 142 aa6.56□□□□□ -1.36
SYNE1-225ENST00000481502 CYB5BO43169 146 aa6.56□□□□□ -1.36
SYNE1-225ENST00000481502 HOXA3O43365 443 aaPredicted RBP6.56□□□□□ -1.36
SYNE1-225ENST00000481502 TCF21O43680 179 aa6.56□□□□□ -1.36
SYNE1-225ENST00000481502 RBMXL2O75526 392 aaKnown RBP6.56□□□□□ -1.36
SYNE1-225ENST00000481502 IGF1P05019 195 aa6.56□□□□□ -1.36
SYNE1-225ENST00000481502 CXCL3P19876 107 aa6.56□□□□□ -1.36
SYNE1-225ENST00000481502 PVALBP20472 110 aaPredicted RBP6.56□□□□□ -1.36
SYNE1-225ENST00000481502 PSMB6P28072 239 aa6.56□□□□□ -1.36
SYNE1-225ENST00000481502 RPP30P78346 268 aaKnown RBP6.56□□□□□ -1.36
SYNE1-225ENST00000481502 CX3CL1P78423 397 aa6.56□□□□□ -1.36
SYNE1-225ENST00000481502 TNFRSF9Q07011 255 aa6.56□□□□□ -1.36
SYNE1-225ENST00000481502 HNF4GQ14541 408 aa6.56□□□□□ -1.36
SYNE1-225ENST00000481502 MRGPRG-AS1Q2M3A8 158 aa6.56□□□□□ -1.36
SYNE1-225ENST00000481502 KLK9Q2XQG4 91 aa6.56□□□□□ -1.36
SYNE1-225ENST00000481502 AKIRIN2Q53H80 203 aa6.56□□□□□ -1.36
SYNE1-225ENST00000481502 Q6ZRM9 215 aa6.56□□□□□ -1.36
SYNE1-225ENST00000481502 SSX9Q7RTT3 188 aa6.56□□□□□ -1.36
SYNE1-225ENST00000481502 TCTE3Q8IZS6 198 aa6.56□□□□□ -1.36
SYNE1-225ENST00000481502 Q8N2B8 174 aa6.56□□□□□ -1.36
SYNE1-225ENST00000481502 CLCC1Q96S66 551 aa6.56□□□□□ -1.36
SYNE1-225ENST00000481502 QTRT1Q9BXR0 403 aaKnown RBP6.56□□□□□ -1.36
SYNE1-225ENST00000481502 PRSS22Q9GZN4 317 aa6.56□□□□□ -1.36
SYNE1-225ENST00000481502 HIPK2Q9H2X6 1198 aa6.56□□□□□ -1.36
SYNE1-225ENST00000481502 FBXL15Q9H469 300 aa6.56□□□□□ -1.36
SYNE1-225ENST00000481502 GSX1Q9H4S2 264 aaPredicted RBP6.56□□□□□ -1.36
SYNE1-225ENST00000481502 ZNF430Q9H8G1 570 aaPredicted RBP6.56□□□□□ -1.36
SYNE1-225ENST00000481502 KLK9Q9UKQ9 250 aa6.56□□□□□ -1.36
SYNE1-225ENST00000481502 OR51B2Q9Y5P1 312 aa6.56□□□□□ -1.36
SYNE1-225ENST00000481502 WSB1Q9Y6I7 421 aa6.56□□□□□ -1.36
SYNE1-225ENST00000481502 U3KQ87 197 aa6.56□□□□□ -1.36
SYNE1-225ENST00000481502 TNCP24821 2201 aa6.56□□□□□ -1.36
SYNE1-225ENST00000481502 IGHV7-81A0A0B4J1V7 117 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 TEX50A0A1B0GTY4 177 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 TMEM89A2RUT3 159 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 FAM25EA8MYX2 175 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 TRIM77I1YAP6 450 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 WRBO00258 174 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 SYNGR2O43760 224 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 GPR137BO60478 399 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 TSC22D2O75157 780 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 CCNKO75909 580 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 CNIH1O95406 144 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 IFNA17P01571 189 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 IGHV4-59P01825 116 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 OR9G9P0C7N8 305 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 SLC25A4P12235 298 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 LYL1P12980 280 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 CD24P25063 80 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 RPL27AP46776 148 aaKnown RBP6.55□□□□□ -1.36
SYNE1-225ENST00000481502 OR2B8PP59922 312 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 ERHP84090 104 aaKnown RBP6.55□□□□□ -1.36
SYNE1-225ENST00000481502 C2orf68Q2NKX9 166 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 TMEM65Q6PI78 240 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 AKAP14Q86UN6 197 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 VKORC1L1Q8N0U8 176 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 ZNF114Q8NC26 417 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 SGMS2Q8NHU3 365 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 PPP1R1CQ8WVI7 109 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 C22orf15Q8WYQ4 148 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 SMIM8Q96KF7 97 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 ENY2Q9NPA8 101 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 PRR13Q9NZ81 148 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 GSKIPQ9P0R6 139 aa6.55□□□□□ -1.36
SYNE1-225ENST00000481502 A0A1B0GUS0 222 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 MDFIC2A0A1B0GVS7 189 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 DNAJC9-AS1A6NH13 148 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 NPIPB5A8MRT5 1133 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 MPTX1A8MV57 137 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 E5RGE8 158 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 H3BUA1 57 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 AP4M1O00189 453 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 CORTO00230 105 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 DEDDO75618 318 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 MPC2O95563 127 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 CA2P00918 260 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 MBPP02686 304 aaPredicted RBP6.54□□□□□ -1.36
SYNE1-225ENST00000481502 AMY1AP04745 511 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 CRYBA1P05813 215 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 CRYGCP07315 174 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 CNTFRP26992 372 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 HTR2BP41595 481 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 P2RY1P47900 373 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 SUB1P53999 127 aaKnown RBP eCLIP6.54□□□□□ -1.36
SYNE1-225ENST00000481502 FXYD3Q14802 87 aa6.54□□□□□ -1.36
SYNE1-225ENST00000481502 TNXAQ16473 311 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms