RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 PSMD7P51665 324 aa8.3□□□□□ -1.08
TTC28-206ENST00000480563 ARFRP1Q13795 201 aa8.3□□□□□ -1.08
TTC28-206ENST00000480563 KCTD21Q4G0X4 260 aa8.3□□□□□ -1.08
TTC28-206ENST00000480563 PLET1Q6UQ28 207 aa8.3□□□□□ -1.08
TTC28-206ENST00000480563 KCTD9Q7L273 389 aa8.3□□□□□ -1.08
TTC28-206ENST00000480563 H1FOOQ8IZA3 346 aaPredicted RBP8.3□□□□□ -1.08
TTC28-206ENST00000480563 GVQW1Q8N7I0 195 aa8.3□□□□□ -1.08
TTC28-206ENST00000480563 OR11H2Q8NH07 326 aa8.3□□□□□ -1.08
TTC28-206ENST00000480563 VSTM2AQ8TAG5 236 aa8.3□□□□□ -1.08
TTC28-206ENST00000480563 GFI1Q99684 422 aa8.3□□□□□ -1.08
TTC28-206ENST00000480563 ZNF436Q9C0F3 470 aaPredicted RBP8.3□□□□□ -1.08
TTC28-206ENST00000480563 C6orf62Q9GZU0 229 aaPredicted RBP8.3□□□□□ -1.08
TTC28-206ENST00000480563 C11orf68Q9H3H3 251 aaKnown RBP8.3□□□□□ -1.08
TTC28-206ENST00000480563 KCNK7Q9Y2U2 307 aa8.3□□□□□ -1.08
TTC28-206ENST00000480563 PRELID3BQ9Y3B1 194 aa8.3□□□□□ -1.08
TTC28-206ENST00000480563 DNAH6Q9C0G6 4158 aa8.29□□□□□ -1.08
TTC28-206ENST00000480563 TNFAIP8O95379 198 aa8.29□□□□□ -1.08
TTC28-206ENST00000480563 REG1AP05451 166 aa8.29□□□□□ -1.08
TTC28-206ENST00000480563 UCHL1P09936 223 aa8.29□□□□□ -1.08
TTC28-206ENST00000480563 RPA2P15927 270 aa8.29□□□□□ -1.08
TTC28-206ENST00000480563 MFAP2P55001 183 aa8.29□□□□□ -1.08
TTC28-206ENST00000480563 CLDN12P56749 244 aa8.29□□□□□ -1.08
TTC28-206ENST00000480563 RPL30P62888 115 aaKnown RBP8.29□□□□□ -1.08
TTC28-206ENST00000480563 RAB11BQ15907 218 aa8.29□□□□□ -1.08
TTC28-206ENST00000480563 C2orf76Q3KRA6 126 aa8.29□□□□□ -1.08
TTC28-206ENST00000480563 LIPKQ5VXJ0 399 aa8.29□□□□□ -1.08
TTC28-206ENST00000480563 ZNF773Q6PK81 442 aa8.29□□□□□ -1.08
TTC28-206ENST00000480563 APRG1Q8IVJ8 170 aa8.29□□□□□ -1.08
TTC28-206ENST00000480563 ZNF502Q8TBZ5 544 aa8.29□□□□□ -1.08
TTC28-206ENST00000480563 CD300LFQ8TDQ1 290 aa8.29□□□□□ -1.08
TTC28-206ENST00000480563 RAB3CQ96E17 227 aa8.29□□□□□ -1.08
TTC28-206ENST00000480563 MGLLQ99685 303 aa8.29□□□□□ -1.08
TTC28-206ENST00000480563 ACOT13Q9NPJ3 140 aa8.29□□□□□ -1.08
TTC28-206ENST00000480563 MRPS7Q9Y2R9 242 aaKnown RBP8.29□□□□□ -1.08
TTC28-206ENST00000480563 AK6Q9Y3D8 172 aaKnown RBP8.29□□□□□ -1.08
TTC28-206ENST00000480563 RAB27BO00194 218 aa8.28□□□□□ -1.08
TTC28-206ENST00000480563 DEFB4AO15263 64 aa8.28□□□□□ -1.08
TTC28-206ENST00000480563 ARL6IP5O75915 188 aa8.28□□□□□ -1.08
TTC28-206ENST00000480563 PSMB9P28065 219 aa8.28□□□□□ -1.08
TTC28-206ENST00000480563 RANBP1P43487 201 aa8.28□□□□□ -1.08
TTC28-206ENST00000480563 ZNF124Q15973 351 aa8.28□□□□□ -1.08
TTC28-206ENST00000480563 PUSL1Q8N0Z8 303 aaKnown RBP8.28□□□□□ -1.08
TTC28-206ENST00000480563 ZNF645Q8N7E2 425 aa8.28□□□□□ -1.08
TTC28-206ENST00000480563 OR4A5Q8NH83 315 aa8.28□□□□□ -1.08
TTC28-206ENST00000480563 TMEM190Q8WZ59 177 aa8.28□□□□□ -1.08
TTC28-206ENST00000480563 FAM3DQ96BQ1 224 aa8.28□□□□□ -1.08
TTC28-206ENST00000480563 CENPOQ9BU64 300 aa8.28□□□□□ -1.08
TTC28-206ENST00000480563 MUC4Q99102 2169 aa8.27□□□□□ -1.09
TTC28-206ENST00000480563 IGKV1D-8A0A087WSZ0 117 aa8.27□□□□□ -1.09
TTC28-206ENST00000480563 CGB1A6NKQ9 187 aa8.27□□□□□ -1.09
TTC28-206ENST00000480563 TGOLN2O43493 480 aa8.27□□□□□ -1.09
TTC28-206ENST00000480563 CTSDP07339 412 aaPredicted RBP8.27□□□□□ -1.09
TTC28-206ENST00000480563 GNB3P16520 340 aa8.27□□□□□ -1.09
TTC28-206ENST00000480563 CD36P16671 472 aa8.27□□□□□ -1.09
TTC28-206ENST00000480563 PTBP1P26599 531 aaKnown RBP eCLIP8.27□□□□□ -1.09
TTC28-206ENST00000480563 ADMP35318 185 aa8.27□□□□□ -1.09
TTC28-206ENST00000480563 RPL8P62917 257 aaKnown RBP8.27□□□□□ -1.09
TTC28-206ENST00000480563 PLA2G7Q13093 441 aa8.27□□□□□ -1.09
TTC28-206ENST00000480563 SSX9Q7RTT3 188 aa8.27□□□□□ -1.09
TTC28-206ENST00000480563 SPARTQ8N0X7 666 aa8.27□□□□□ -1.09
TTC28-206ENST00000480563 OR4S2Q8NH73 311 aa8.27□□□□□ -1.09
TTC28-206ENST00000480563 KRTAP4-5Q9BYR2 181 aa8.27□□□□□ -1.09
TTC28-206ENST00000480563 DAZ1Q9NQZ3 744 aaKnown RBP8.27□□□□□ -1.09
TTC28-206ENST00000480563 RAB22AQ9UL26 194 aa8.27□□□□□ -1.09
TTC28-206ENST00000480563 RBMX2Q9Y388 322 aaKnown RBP8.27□□□□□ -1.09
TTC28-206ENST00000480563 PKHD1P08F94 4074 aa8.26□□□□□ -1.09
TTC28-206ENST00000480563 A0A075B6Q4 140 aa8.26□□□□□ -1.09
TTC28-206ENST00000480563 A0A087WXM4 84 aa8.26□□□□□ -1.09
TTC28-206ENST00000480563 PRSS29PA6NIE9 313 aa8.26□□□□□ -1.09
TTC28-206ENST00000480563 C11orf94C9JXX5 98 aa8.26□□□□□ -1.09
TTC28-206ENST00000480563 IGLV2-14P01704 120 aa8.26□□□□□ -1.09
TTC28-206ENST00000480563 HLA-GP17693 338 aa8.26□□□□□ -1.09
TTC28-206ENST00000480563 MYL9P24844 172 aa8.26□□□□□ -1.09
TTC28-206ENST00000480563 TALDO1P37837 337 aa8.26□□□□□ -1.09
TTC28-206ENST00000480563 CMC4P56277 68 aaPredicted RBP8.26□□□□□ -1.09
TTC28-206ENST00000480563 BRWD1-AS2P59051 145 aa8.26□□□□□ -1.09
TTC28-206ENST00000480563 UBE2UQ5VVX9 321 aa8.26□□□□□ -1.09
TTC28-206ENST00000480563 Q6ZS49 121 aa8.26□□□□□ -1.09
TTC28-206ENST00000480563 OR10R2Q8NGX6 335 aa8.26□□□□□ -1.09
TTC28-206ENST00000480563 TCTEX1D2Q8WW35 142 aa8.26□□□□□ -1.09
TTC28-206ENST00000480563 TMEM203Q969S6 136 aa8.26□□□□□ -1.09
TTC28-206ENST00000480563 C20orf24Q9BUV8 137 aa8.26□□□□□ -1.09
TTC28-206ENST00000480563 NDUFB11Q9NX14 153 aa8.26□□□□□ -1.09
TTC28-206ENST00000480563 THYN1Q9P016 225 aa8.26□□□□□ -1.09
TTC28-206ENST00000480563 OR2W1Q9Y3N9 320 aa8.26□□□□□ -1.09
TTC28-206ENST00000480563 FAT2Q9NYQ8 4349 aa8.25□□□□□ -1.09
TTC28-206ENST00000480563 DNAH17Q9UFH2 4485 aa8.25□□□□□ -1.09
TTC28-206ENST00000480563 IGHV3OR16-8A0A075B7F1 116 aa8.25□□□□□ -1.09
TTC28-206ENST00000480563 TMEM272A0A1B0GTI8 110 aa8.25□□□□□ -1.09
TTC28-206ENST00000480563 OR2T8A6NH00 312 aa8.25□□□□□ -1.09
TTC28-206ENST00000480563 K7EMT4 169 aa8.25□□□□□ -1.09
TTC28-206ENST00000480563 MFNGO00587 321 aa8.25□□□□□ -1.09
TTC28-206ENST00000480563 ZNF207O43670 478 aaKnown RBP8.25□□□□□ -1.09
TTC28-206ENST00000480563 SLC22A5O76082 557 aa8.25□□□□□ -1.09
TTC28-206ENST00000480563 HRASP01112 189 aa8.25□□□□□ -1.09
TTC28-206ENST00000480563 HLA-DQB1P01920 261 aa8.25□□□□□ -1.09
TTC28-206ENST00000480563 NFYAP23511 347 aaPredicted RBP8.25□□□□□ -1.09
TTC28-206ENST00000480563 GADD45AP24522 165 aa8.25□□□□□ -1.09
TTC28-206ENST00000480563 TFPI2P48307 235 aa8.25□□□□□ -1.09
TTC28-206ENST00000480563 OR2B8PP59922 312 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms