RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 TMED4Q7Z7H5 227 aa15.44■□□□□ 0.06
LIME1-205ENST00000480139 CENPSQ8N2Z9 138 aa15.44■□□□□ 0.06
LIME1-205ENST00000480139 TMEM56Q96MV1 263 aa15.44■□□□□ 0.06
LIME1-205ENST00000480139 PHB2Q99623 299 aa15.44■□□□□ 0.06
LIME1-205ENST00000480139 ZFP57Q9NU63 452 aa15.44■□□□□ 0.06
LIME1-205ENST00000480139 TMEM56-RWDD3S4R434 201 aa15.44■□□□□ 0.06
LIME1-205ENST00000480139 A0A1W2PN81 502 aa15.43■□□□□ 0.06
LIME1-205ENST00000480139 TCRBV4S1A1TA0A5B7 111 aa15.43■□□□□ 0.06
LIME1-205ENST00000480139 ADARB2-AS1A8MUL3 147 aa15.43■□□□□ 0.06
LIME1-205ENST00000480139 M0QZ24 198 aa15.43■□□□□ 0.06
LIME1-205ENST00000480139 SOX15O60248 233 aa15.43■□□□□ 0.06
LIME1-205ENST00000480139 BRI3O95415 125 aa15.43■□□□□ 0.06
LIME1-205ENST00000480139 P0C879 139 aa15.43■□□□□ 0.06
LIME1-205ENST00000480139 ANXA3P12429 323 aa15.43■□□□□ 0.06
LIME1-205ENST00000480139 CHRNA7P36544 502 aa15.43■□□□□ 0.06
LIME1-205ENST00000480139 ASAH1Q13510 395 aa15.43■□□□□ 0.06
LIME1-205ENST00000480139 C2orf68Q2NKX9 166 aa15.43■□□□□ 0.06
LIME1-205ENST00000480139 C10orf55Q5SWW7 151 aa15.43■□□□□ 0.06
LIME1-205ENST00000480139 H2BFWTQ7Z2G1 175 aa15.43■□□□□ 0.06
LIME1-205ENST00000480139 SLC25A42Q86VD7 318 aa15.43■□□□□ 0.06
LIME1-205ENST00000480139 MYOZ3Q8TDC0 251 aa15.43■□□□□ 0.06
LIME1-205ENST00000480139 RBPMSQ93062 196 aaKnown RBP15.43■□□□□ 0.06
LIME1-205ENST00000480139 IL22RA2Q969J5 263 aa15.43■□□□□ 0.06
LIME1-205ENST00000480139 COMMD5Q9GZQ3 224 aa15.43■□□□□ 0.06
LIME1-205ENST00000480139 PRNDQ9UKY0 176 aa15.43■□□□□ 0.06
LIME1-205ENST00000480139 PIGBOS1A0A0B4J2F0 54 aa15.42■□□□□ 0.06
LIME1-205ENST00000480139 TEX22C9J3V5 150 aa15.42■□□□□ 0.06
LIME1-205ENST00000480139 H3BUA1 57 aa15.42■□□□□ 0.06
LIME1-205ENST00000480139 SNAPC5O75971 98 aa15.42■□□□□ 0.06
LIME1-205ENST00000480139 IGKV1-5P01602 117 aa15.42■□□□□ 0.06
LIME1-205ENST00000480139 OR9G9P0C7N8 305 aa15.42■□□□□ 0.06
LIME1-205ENST00000480139 SLC6A1P30531 599 aa15.42■□□□□ 0.06
LIME1-205ENST00000480139 AKR1C2P52895 323 aa15.42■□□□□ 0.06
LIME1-205ENST00000480139 SRPXP78539 464 aa15.42■□□□□ 0.06
LIME1-205ENST00000480139 TMEM187Q14656 261 aa15.42■□□□□ 0.06
LIME1-205ENST00000480139 THOC7Q6I9Y2 204 aaKnown RBP15.42■□□□□ 0.06
LIME1-205ENST00000480139 SRSF8Q9BRL6 282 aaKnown RBP15.42■□□□□ 0.06
LIME1-205ENST00000480139 TMEM14BQ9NUH8 114 aa15.42■□□□□ 0.06
LIME1-205ENST00000480139 FKBP11Q9NYL4 201 aa15.42■□□□□ 0.06
LIME1-205ENST00000480139 TBC1D24Q9ULP9 559 aa15.42■□□□□ 0.06
LIME1-205ENST00000480139 C15orf61A6NNL5 157 aa15.41■□□□□ 0.06
LIME1-205ENST00000480139 RPLP1P05386 114 aaKnown RBP15.41■□□□□ 0.06
LIME1-205ENST00000480139 OR2B8PP59922 312 aa15.41■□□□□ 0.06
LIME1-205ENST00000480139 RPL23AP62750 156 aaKnown RBP15.41■□□□□ 0.06
LIME1-205ENST00000480139 MZT2BQ6NZ67 158 aa15.41■□□□□ 0.06
LIME1-205ENST00000480139 TMEM65Q6PI78 240 aa15.41■□□□□ 0.06
LIME1-205ENST00000480139 ZNF695Q8IW36 515 aa15.41■□□□□ 0.06
LIME1-205ENST00000480139 FAM219AQ8IW50 185 aa15.41■□□□□ 0.06
LIME1-205ENST00000480139 SELENOHQ8IZQ5 122 aaKnown RBP15.41■□□□□ 0.06
LIME1-205ENST00000480139 LHFPL5Q8TAF8 219 aa15.41■□□□□ 0.06
LIME1-205ENST00000480139 FAM110DQ8TAY7 271 aaPredicted RBP15.41■□□□□ 0.06
LIME1-205ENST00000480139 SLA2Q9H6Q3 261 aa15.41■□□□□ 0.06
LIME1-205ENST00000480139 A0A1B0GW64 132 aa15.4■□□□□ 0.06
LIME1-205ENST00000480139 CGB1A6NKQ9 187 aa15.4■□□□□ 0.06
LIME1-205ENST00000480139 E7EUB6 86 aa15.4■□□□□ 0.06
LIME1-205ENST00000480139 PF4V1P10720 104 aa15.4■□□□□ 0.06
LIME1-205ENST00000480139 RAB9AP51151 201 aa15.4■□□□□ 0.06
LIME1-205ENST00000480139 HIST2H2BDQ6DRA6 164 aa15.4■□□□□ 0.06
LIME1-205ENST00000480139 TTC9CQ8N5M4 171 aa15.4■□□□□ 0.06
LIME1-205ENST00000480139 OR5B3Q8NH48 314 aa15.4■□□□□ 0.06
LIME1-205ENST00000480139 RRNAD1Q96FB5 475 aaKnown RBP15.4■□□□□ 0.06
LIME1-205ENST00000480139 QTRT1Q9BXR0 403 aaKnown RBP15.4■□□□□ 0.06
LIME1-205ENST00000480139 ZNF257Q9Y2Q1 563 aa15.4■□□□□ 0.06
LIME1-205ENST00000480139 TEX50A0A1B0GTY4 177 aa15.39■□□□□ 0.05
LIME1-205ENST00000480139 NPIPB5A8MRT5 1133 aa15.39■□□□□ 0.05
LIME1-205ENST00000480139 SFT2D2O95562 160 aa15.39■□□□□ 0.05
LIME1-205ENST00000480139 MYOD1P15172 320 aa15.39■□□□□ 0.05
LIME1-205ENST00000480139 CDX1P47902 265 aaPredicted RBP15.39■□□□□ 0.05
LIME1-205ENST00000480139 IFITM3Q01628 133 aa15.39■□□□□ 0.05
LIME1-205ENST00000480139 PPP1R1AQ13522 171 aa15.39■□□□□ 0.05
LIME1-205ENST00000480139 NSUN5P1Q3KNT7 163 aa15.39■□□□□ 0.05
LIME1-205ENST00000480139 KHDC1LQ5JSQ8 128 aa15.39■□□□□ 0.05
LIME1-205ENST00000480139 PRR31Q5SQ13 230 aa15.39■□□□□ 0.05
LIME1-205ENST00000480139 TMEM268Q5VZI3 342 aa15.39■□□□□ 0.05
LIME1-205ENST00000480139 HSD17B13Q7Z5P4 300 aaPredicted RBP15.39■□□□□ 0.05
LIME1-205ENST00000480139 ZNF429Q86V71 674 aa15.39■□□□□ 0.05
LIME1-205ENST00000480139 OR1L8Q8NGR8 309 aa15.39■□□□□ 0.05
LIME1-205ENST00000480139 OR4A16Q8NH70 328 aa15.39■□□□□ 0.05
LIME1-205ENST00000480139 LSM10Q969L4 123 aaKnown RBP15.39■□□□□ 0.05
LIME1-205ENST00000480139 UBE2E2Q96LR5 201 aa15.39■□□□□ 0.05
LIME1-205ENST00000480139 FYTTD1Q96QD9 318 aaKnown RBP15.39■□□□□ 0.05
LIME1-205ENST00000480139 KLK15Q9H2R5 256 aa15.39■□□□□ 0.05
LIME1-205ENST00000480139 NDUFA4L2Q9NRX3 87 aa15.39■□□□□ 0.05
LIME1-205ENST00000480139 NSG2Q9Y328 171 aa15.39■□□□□ 0.05
LIME1-205ENST00000480139 OR51B2Q9Y5P1 312 aa15.39■□□□□ 0.05
LIME1-205ENST00000480139 TCRBP04435 133 aa15.38■□□□□ 0.05
LIME1-205ENST00000480139 VAMP1P23763 118 aa15.38■□□□□ 0.05
LIME1-205ENST00000480139 KIAA0141Q14154 515 aaPredicted RBP15.38■□□□□ 0.05
LIME1-205ENST00000480139 LCNL1Q6ZST4 164 aa15.38■□□□□ 0.05
LIME1-205ENST00000480139 LGI3Q8N145 548 aa15.38■□□□□ 0.05
LIME1-205ENST00000480139 LRTM2Q8N967 370 aa15.38■□□□□ 0.05
LIME1-205ENST00000480139 OR5T1Q8NG75 326 aa15.38■□□□□ 0.05
LIME1-205ENST00000480139 C20orf85Q9H1P6 137 aa15.38■□□□□ 0.05
LIME1-205ENST00000480139 FLVCR2Q9UPI3 526 aa15.38■□□□□ 0.05
LIME1-205ENST00000480139 A0A0B4J2A0 478 aa15.37■□□□□ 0.05
LIME1-205ENST00000480139 DUXBA0A1W2PPF3 345 aa15.37■□□□□ 0.05
LIME1-205ENST00000480139 HMX3A6NHT5 357 aa15.37■□□□□ 0.05
LIME1-205ENST00000480139 DBX1A6NMT0 343 aa15.37■□□□□ 0.05
LIME1-205ENST00000480139 CRYGCP07315 174 aa15.37■□□□□ 0.05
LIME1-205ENST00000480139 TRAPPC2P0DI81 140 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms