RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 PHLDA2Q53GA4 152 aa12.01□□□□□ -0.49
C9orf3-217ENST00000479161 FAM209BQ5JX69 171 aa12.01□□□□□ -0.49
C9orf3-217ENST00000479161 LCNL1Q6ZST4 164 aa12.01□□□□□ -0.49
C9orf3-217ENST00000479161 C18orf65Q6ZTR6 163 aa12.01□□□□□ -0.49
C9orf3-217ENST00000479161 HSD17B13Q7Z5P4 300 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-217ENST00000479161 GDPD1Q8N9F7 314 aa12.01□□□□□ -0.49
C9orf3-217ENST00000479161 DMBX1Q8NFW5 382 aa12.01□□□□□ -0.49
C9orf3-217ENST00000479161 TRIM63Q969Q1 353 aa12.01□□□□□ -0.49
C9orf3-217ENST00000479161 MRGPRFQ96AM1 343 aa12.01□□□□□ -0.49
C9orf3-217ENST00000479161 TMEM140Q9NV12 185 aa12.01□□□□□ -0.49
C9orf3-217ENST00000479161 FKBP11Q9NYL4 201 aa12.01□□□□□ -0.49
C9orf3-217ENST00000479161 SCP2D1Q9UJQ7 156 aa12.01□□□□□ -0.49
C9orf3-217ENST00000479161 ZNF257Q9Y2Q1 563 aa12.01□□□□□ -0.49
C9orf3-217ENST00000479161 TRBV9A0A0B4J1U6 114 aa12□□□□□ -0.49
C9orf3-217ENST00000479161 TEX22C9J3V5 150 aa12□□□□□ -0.49
C9orf3-217ENST00000479161 WIPF1O43516 503 aa12□□□□□ -0.49
C9orf3-217ENST00000479161 LGALS1P09382 135 aaKnown RBP12□□□□□ -0.49
C9orf3-217ENST00000479161 PGAM2P15259 253 aa12□□□□□ -0.49
C9orf3-217ENST00000479161 DCTN2Q13561 401 aaKnown RBP12□□□□□ -0.49
C9orf3-217ENST00000479161 PYDC2Q56P42 97 aa12□□□□□ -0.49
C9orf3-217ENST00000479161 OR13C8Q8NGS7 320 aa12□□□□□ -0.49
C9orf3-217ENST00000479161 PHB2Q99623 299 aa12□□□□□ -0.49
C9orf3-217ENST00000479161 HRASLSQ9HDD0 168 aa12□□□□□ -0.49
C9orf3-217ENST00000479161 GPR132Q9UNW8 380 aa12□□□□□ -0.49
C9orf3-217ENST00000479161 FAM223BA6NKX1 122 aa11.99□□□□□ -0.49
C9orf3-217ENST00000479161 ATG12O94817 140 aa11.99□□□□□ -0.49
C9orf3-217ENST00000479161 TRGV3P03979 118 aa11.99□□□□□ -0.49
C9orf3-217ENST00000479161 SERPINE2P07093 398 aa11.99□□□□□ -0.49
C9orf3-217ENST00000479161 OR8U8P0C7N1 319 aa11.99□□□□□ -0.49
C9orf3-217ENST00000479161 TPPP2P59282 170 aa11.99□□□□□ -0.49
C9orf3-217ENST00000479161 OR2B8PP59922 312 aa11.99□□□□□ -0.49
C9orf3-217ENST00000479161 ZNF616Q08AN1 781 aa11.99□□□□□ -0.49
C9orf3-217ENST00000479161 KLF9Q13886 244 aaPredicted RBP11.99□□□□□ -0.49
C9orf3-217ENST00000479161 SCGB2B2Q4G0G5 96 aa11.99□□□□□ -0.49
C9orf3-217ENST00000479161 SSX9Q7RTT3 188 aa11.99□□□□□ -0.49
C9orf3-217ENST00000479161 FAM223AQ8IWN6 122 aa11.99□□□□□ -0.49
C9orf3-217ENST00000479161 OR5T1Q8NG75 326 aa11.99□□□□□ -0.49
C9orf3-217ENST00000479161 MARCH1Q8TCQ1 289 aa11.99□□□□□ -0.49
C9orf3-217ENST00000479161 SEC22AQ96IW7 307 aa11.99□□□□□ -0.49
C9orf3-217ENST00000479161 COMMD5Q9GZQ3 224 aa11.99□□□□□ -0.49
C9orf3-217ENST00000479161 GNB4Q9HAV0 340 aa11.99□□□□□ -0.49
C9orf3-217ENST00000479161 COPZ2Q9P299 210 aa11.99□□□□□ -0.49
C9orf3-217ENST00000479161 C3orf85A0A1B0GTC6 90 aa11.98□□□□□ -0.49
C9orf3-217ENST00000479161 DHFRP00374 187 aa11.98□□□□□ -0.49
C9orf3-217ENST00000479161 KRASP01116 189 aa11.98□□□□□ -0.49
C9orf3-217ENST00000479161 UCP1P25874 307 aa11.98□□□□□ -0.49
C9orf3-217ENST00000479161 ZNF45Q02386 682 aa11.98□□□□□ -0.49
C9orf3-217ENST00000479161 BEAN1Q3B7T3 259 aa11.98□□□□□ -0.49
C9orf3-217ENST00000479161 TOMM5Q8N4H5 51 aa11.98□□□□□ -0.49
C9orf3-217ENST00000479161 OR11H1Q8NG94 326 aa11.98□□□□□ -0.49
C9orf3-217ENST00000479161 OR51S1Q8NGJ8 323 aa11.98□□□□□ -0.49
C9orf3-217ENST00000479161 OR1N2Q8NGR9 330 aa11.98□□□□□ -0.49
C9orf3-217ENST00000479161 OR5B3Q8NH48 314 aa11.98□□□□□ -0.49
C9orf3-217ENST00000479161 RTBDNQ9BSG5 229 aaPredicted RBP11.98□□□□□ -0.49
C9orf3-217ENST00000479161 SRRQ9GZT4 340 aa11.98□□□□□ -0.49
C9orf3-217ENST00000479161 TMEM14BQ9NUH8 114 aa11.98□□□□□ -0.49
C9orf3-217ENST00000479161 PRNDQ9UKY0 176 aa11.98□□□□□ -0.49
C9orf3-217ENST00000479161 C14orf166Q9Y224 244 aaKnown RBP11.98□□□□□ -0.49
C9orf3-217ENST00000479161 A0A1B0GW64 132 aa11.97□□□□□ -0.49
C9orf3-217ENST00000479161 E7EUB6 86 aa11.97□□□□□ -0.49
C9orf3-217ENST00000479161 SNAPC5O75971 98 aa11.97□□□□□ -0.49
C9orf3-217ENST00000479161 HSPB1P04792 205 aaKnown RBP11.97□□□□□ -0.49
C9orf3-217ENST00000479161 CTRB1P17538 263 aa11.97□□□□□ -0.49
C9orf3-217ENST00000479161 C10orf55Q5SWW7 151 aa11.97□□□□□ -0.49
C9orf3-217ENST00000479161 CTRB2Q6GPI1 263 aa11.97□□□□□ -0.49
C9orf3-217ENST00000479161 ZNF343Q6P1L6 599 aa11.97□□□□□ -0.49
C9orf3-217ENST00000479161 NECAP1Q8NC96 275 aa11.97□□□□□ -0.49
C9orf3-217ENST00000479161 OR1L8Q8NGR8 309 aa11.97□□□□□ -0.49
C9orf3-217ENST00000479161 QTRT1Q9BXR0 403 aaKnown RBP11.97□□□□□ -0.49
C9orf3-217ENST00000479161 C5orf66Q9H5L9 145 aa11.97□□□□□ -0.49
C9orf3-217ENST00000479161 ZMAT5Q9UDW3 170 aaKnown RBP11.97□□□□□ -0.49
C9orf3-217ENST00000479161 PIGBOS1A0A0B4J2F0 54 aa11.96□□□□□ -0.49
C9orf3-217ENST00000479161 C13orf42A0A1B0GVH6 325 aa11.96□□□□□ -0.49
C9orf3-217ENST00000479161 CGB1A6NKQ9 187 aa11.96□□□□□ -0.49
C9orf3-217ENST00000479161 CDS2O95674 445 aa11.96□□□□□ -0.49
C9orf3-217ENST00000479161 IGKV1-39P01597 117 aa11.96□□□□□ -0.49
C9orf3-217ENST00000479161 IGKV1D-39P04432 117 aa11.96□□□□□ -0.49
C9orf3-217ENST00000479161 P0C879 139 aa11.96□□□□□ -0.49
C9orf3-217ENST00000479161 HIST1H1BP16401 226 aaKnown RBP11.96□□□□□ -0.49
C9orf3-217ENST00000479161 PSMB6P28072 239 aa11.96□□□□□ -0.49
C9orf3-217ENST00000479161 G6PCP35575 357 aa11.96□□□□□ -0.49
C9orf3-217ENST00000479161 PPP5CP53041 499 aa11.96□□□□□ -0.49
C9orf3-217ENST00000479161 FAAP20Q6NZ36 180 aa11.96□□□□□ -0.49
C9orf3-217ENST00000479161 ZNF429Q86V71 674 aa11.96□□□□□ -0.49
C9orf3-217ENST00000479161 DPF1Q92782 380 aa11.96□□□□□ -0.49
C9orf3-217ENST00000479161 GALNT14Q96FL9 552 aa11.96□□□□□ -0.49
C9orf3-217ENST00000479161 MS4A10Q96PG2 267 aa11.96□□□□□ -0.49
C9orf3-217ENST00000479161 FYTTD1Q96QD9 318 aaKnown RBP11.96□□□□□ -0.49
C9orf3-217ENST00000479161 TP53RKQ96S44 253 aa11.96□□□□□ -0.49
C9orf3-217ENST00000479161 SLC25A21Q9BQT8 299 aaPredicted RBP11.96□□□□□ -0.49
C9orf3-217ENST00000479161 RANGRFQ9HD47 186 aaPredicted RBP11.96□□□□□ -0.49
C9orf3-217ENST00000479161 NDUFA4L2Q9NRX3 87 aa11.96□□□□□ -0.49
C9orf3-217ENST00000479161 ZNF355PQ9NSJ1 428 aa11.96□□□□□ -0.49
C9orf3-217ENST00000479161 COA4Q9NYJ1 87 aa11.96□□□□□ -0.49
C9orf3-217ENST00000479161 TRAV3A0A0B4J244 114 aa11.95□□□□□ -0.5
C9orf3-217ENST00000479161 TEX50A0A1B0GTY4 177 aa11.95□□□□□ -0.5
C9orf3-217ENST00000479161 IGLC7A0M8Q6 106 aa11.95□□□□□ -0.5
C9orf3-217ENST00000479161 CRYM-AS1A6NIL9 109 aa11.95□□□□□ -0.5
C9orf3-217ENST00000479161 C15orf61A6NNL5 157 aa11.95□□□□□ -0.5
C9orf3-217ENST00000479161 LINC01619G3V211 115 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms