RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 BCL2L14Q9BZR8 327 aa2.45□□□□□ -2.02
CDC42BPA-212ENST00000478573 RAB1BQ9H0U4 201 aa2.45□□□□□ -2.02
CDC42BPA-212ENST00000478573 BEX1Q9HBH7 125 aa2.45□□□□□ -2.02
CDC42BPA-212ENST00000478573 DYNLRB1Q9NP97 96 aa2.45□□□□□ -2.02
CDC42BPA-212ENST00000478573 RPRD1BQ9NQG5 326 aaKnown RBP2.45□□□□□ -2.02
CDC42BPA-212ENST00000478573 TUBG2Q9NRH3 451 aa2.45□□□□□ -2.02
CDC42BPA-212ENST00000478573 SCN3BQ9NY72 215 aa2.45□□□□□ -2.02
CDC42BPA-212ENST00000478573 SIGLEC7Q9Y286 467 aa2.45□□□□□ -2.02
CDC42BPA-212ENST00000478573 ORC6Q9Y5N6 252 aa2.45□□□□□ -2.02
CDC42BPA-212ENST00000478573 ANK2Q01484 3957 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 NIPBLQ6KC79 2804 aaeCLIP2.44□□□□□ -2.022e-6■■■■□ 21.6
CDC42BPA-212ENST00000478573 A0A087WUU8 490 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 ARRDC5A6NEK1 342 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 EFCAB9A8MZ26 197 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 G3V2T6 193 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 FFAR1O14842 300 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 MPZL2O60487 215 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 GADD45GO95257 159 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 APOA1P02647 267 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 EIF4EP06730 217 aaKnown RBP2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 OR4A8P0C604 315 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 IGFBP3P17936 291 aaPredicted RBP2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 PTNP21246 168 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 USF1P22415 310 aaPredicted RBP2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 CRABP1P29762 137 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 S100A5P33763 92 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 APLNRP35414 380 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 IFNGR2P38484 337 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 GUCA1AP43080 201 aaPredicted RBP2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 OMPP47874 163 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 OR1E2P47887 323 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 RGS6P49758 472 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 EIF2B2P49770 351 aaKnown RBP2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 SYNJ2BPP57105 145 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 KLF3P57682 345 aaPredicted RBP2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 RAB25P57735 213 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 UBE2MP61081 183 aaKnown RBP2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 LSM6P62312 80 aaKnown RBP2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 SLC35A2P78381 396 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 TSPAN31Q12999 210 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 ENDOGQ14249 297 aaKnown RBP2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 RPEL1Q2QD12 228 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 TMEM249Q2WGJ8 235 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 ORMDL2Q53FV1 153 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 HSD17B12Q53GQ0 312 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 MESTQ5EB52 335 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 FAM27BQ5VT28 67 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 ZNF691Q5VV52 312 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 GLYATQ6IB77 296 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 NTM-AS1Q6ZSK4 140 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 VTCN1Q7Z7D3 282 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 AKAP14Q86UN6 197 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 WDFY1Q8IWB7 410 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 TEX29Q8N6K0 151 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 CYB561D1Q8N8Q1 229 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 SLC30A7Q8NEW0 376 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 OR4K5Q8NGD3 323 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 OR52L1Q8NGH7 329 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 RORBQ92753 470 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 RPEQ96AT9 228 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 TMIGD2Q96BF3 282 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 YIPF6Q96EC8 236 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 PYURFQ96I23 114 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 RBP7Q96R05 134 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 HDHD2Q9H0R4 259 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 NMNAT1Q9HAN9 279 aaPredicted RBP2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 IL20Q9NYY1 176 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 PSG11Q9UQ72 335 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 BAIAP2Q9UQB8 552 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 NACAE9PAV3 2078 aa2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 ANK3Q12955 4377 aaKnown RBP2.44□□□□□ -2.02
CDC42BPA-212ENST00000478573 TRAV27A0A087WT01 109 aa2.43□□□□□ -2.02
CDC42BPA-212ENST00000478573 IGKV1D-43A0A0B4J1Z2 117 aa2.43□□□□□ -2.02
CDC42BPA-212ENST00000478573 A0A0U1RQV1 116 aa2.43□□□□□ -2.02
CDC42BPA-212ENST00000478573 LOC100130705A0A1B0GUX0 176 aa2.43□□□□□ -2.02
CDC42BPA-212ENST00000478573 OR6C6A6NF89 314 aa2.43□□□□□ -2.02
CDC42BPA-212ENST00000478573 BOLA2-SMG1P6H3BVE0 249 aa2.43□□□□□ -2.02
CDC42BPA-212ENST00000478573 CDC42EP2O14613 210 aa2.43□□□□□ -2.02
CDC42BPA-212ENST00000478573 BET1O15155 118 aa2.43□□□□□ -2.02
CDC42BPA-212ENST00000478573 SGCEO43556 437 aa2.43□□□□□ -2.02
CDC42BPA-212ENST00000478573 FSTL3O95633 263 aa2.43□□□□□ -2.02
CDC42BPA-212ENST00000478573 OXTP01178 125 aa2.43□□□□□ -2.02
CDC42BPA-212ENST00000478573 PIPP12273 146 aaPredicted RBP2.43□□□□□ -2.02
CDC42BPA-212ENST00000478573 CTLA4P16410 223 aa2.43□□□□□ -2.02
CDC42BPA-212ENST00000478573 CFL1P23528 166 aaKnown RBP2.43□□□□□ -2.02
CDC42BPA-212ENST00000478573 HLA-DMAP28067 261 aa2.43□□□□□ -2.02
CDC42BPA-212ENST00000478573 ERP29P30040 261 aaKnown RBP2.43□□□□□ -2.02
CDC42BPA-212ENST00000478573 SSTR5P35346 364 aa2.43□□□□□ -2.02
CDC42BPA-212ENST00000478573 GPR4P46093 362 aa2.43□□□□□ -2.02
CDC42BPA-212ENST00000478573 GDI2P50395 445 aaKnown RBP2.43□□□□□ -2.02
CDC42BPA-212ENST00000478573 FXYD6P3P58550 94 aa2.43□□□□□ -2.02
CDC42BPA-212ENST00000478573 GNG2P59768 71 aa2.43□□□□□ -2.02
CDC42BPA-212ENST00000478573 HIST1H3AP68431 136 aa2.43□□□□□ -2.02
CDC42BPA-212ENST00000478573 EMX1Q04741 257 aaPredicted RBP2.43□□□□□ -2.02
CDC42BPA-212ENST00000478573 FMODQ06828 376 aa2.43□□□□□ -2.02
CDC42BPA-212ENST00000478573 BAMBIQ13145 260 aa2.43□□□□□ -2.02
CDC42BPA-212ENST00000478573 EBI3Q14213 229 aa2.43□□□□□ -2.02
CDC42BPA-212ENST00000478573 KCNJ8Q15842 424 aa2.43□□□□□ -2.02
CDC42BPA-212ENST00000478573 ZNF404Q494X3 552 aa2.43□□□□□ -2.02
CDC42BPA-212ENST00000478573 PABPC1L2AQ5JQF8 200 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms