RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 LRRC36Q1X8D7 754 aa2.97□□□□□ -1.93
VPS50-214ENST00000477935 ZNF691Q5VV52 312 aa2.97□□□□□ -1.93
VPS50-214ENST00000477935 MEDAGQ5VYS4 303 aa2.97□□□□□ -1.93
VPS50-214ENST00000477935 TMEM42Q69YG0 159 aa2.97□□□□□ -1.93
VPS50-214ENST00000477935 UNQ5815/PRO19632Q6UWF5 114 aa2.97□□□□□ -1.93
VPS50-214ENST00000477935 MOB1BQ7L9L4 216 aa2.97□□□□□ -1.93
VPS50-214ENST00000477935 FAM58AQ8N1B3 248 aa2.97□□□□□ -1.93
VPS50-214ENST00000477935 OR1L6Q8NGR2 347 aa2.97□□□□□ -1.93
VPS50-214ENST00000477935 SLC25A38Q96DW6 304 aa2.97□□□□□ -1.93
VPS50-214ENST00000477935 KAT8Q9H7Z6 458 aaKnown RBP2.97□□□□□ -1.93
VPS50-214ENST00000477935 RHOFQ9HBH0 211 aa2.97□□□□□ -1.93
VPS50-214ENST00000477935 EXOSC4Q9NPD3 245 aaKnown RBP2.97□□□□□ -1.93
VPS50-214ENST00000477935 CALYQ9NYX4 217 aa2.97□□□□□ -1.93
VPS50-214ENST00000477935 LRP1Q07954 4544 aaKnown RBP2.97□□□□□ -1.93
VPS50-214ENST00000477935 NBDYA0A0U1RRE5 68 aa2.96□□□□□ -1.94
VPS50-214ENST00000477935 FBLL1A6NHQ2 334 aaKnown RBP2.96□□□□□ -1.94
VPS50-214ENST00000477935 SMIM23A6NLE4 172 aa2.96□□□□□ -1.94
VPS50-214ENST00000477935 DHRS7CA6NNS2 312 aa2.96□□□□□ -1.94
VPS50-214ENST00000477935 SIRPB1O00241 398 aa2.96□□□□□ -1.94
VPS50-214ENST00000477935 DHRS3O75911 302 aa2.96□□□□□ -1.94
VPS50-214ENST00000477935 NDUFA3O95167 84 aa2.96□□□□□ -1.94
VPS50-214ENST00000477935 OR2H2O95918 312 aa2.96□□□□□ -1.94
VPS50-214ENST00000477935 IGHV3-23P01764 117 aa2.96□□□□□ -1.94
VPS50-214ENST00000477935 IGHV3-7P01780 117 aa2.96□□□□□ -1.94
VPS50-214ENST00000477935 PYCR1P32322 319 aa2.96□□□□□ -1.94
VPS50-214ENST00000477935 MRPL19P49406 292 aaKnown RBP2.96□□□□□ -1.94
VPS50-214ENST00000477935 GNG10P50151 68 aa2.96□□□□□ -1.94
VPS50-214ENST00000477935 SELENOWP63302 87 aa2.96□□□□□ -1.94
VPS50-214ENST00000477935 PAX5Q02548 391 aa2.96□□□□□ -1.94
VPS50-214ENST00000477935 UBE2V2Q15819 145 aa2.96□□□□□ -1.94
VPS50-214ENST00000477935 PRR4Q16378 134 aa2.96□□□□□ -1.94
VPS50-214ENST00000477935 PAGE3Q5JUK9 113 aa2.96□□□□□ -1.94
VPS50-214ENST00000477935 UFSP1Q6NVU6 142 aa2.96□□□□□ -1.94
VPS50-214ENST00000477935 TBPL2Q6SJ96 375 aa2.96□□□□□ -1.94
VPS50-214ENST00000477935 SLC25A48Q6ZT89 311 aaKnown RBP2.96□□□□□ -1.94
VPS50-214ENST00000477935 TMEM61Q8N0U2 210 aa2.96□□□□□ -1.94
VPS50-214ENST00000477935 C15orf53Q8NAA6 179 aa2.96□□□□□ -1.94
VPS50-214ENST00000477935 LFNGQ8NES3 379 aa2.96□□□□□ -1.94
VPS50-214ENST00000477935 OR9I1Q8NGQ6 314 aa2.96□□□□□ -1.94
VPS50-214ENST00000477935 LEAP2Q969E1 77 aa2.96□□□□□ -1.94
VPS50-214ENST00000477935 RDH12Q96NR8 316 aa2.96□□□□□ -1.94
VPS50-214ENST00000477935 SORT1Q99523 831 aa2.96□□□□□ -1.94
VPS50-214ENST00000477935 SDHCQ99643 169 aaPredicted RBP2.96□□□□□ -1.94
VPS50-214ENST00000477935 SH3GL1Q99961 368 aa2.96□□□□□ -1.94
VPS50-214ENST00000477935 NICN1Q9BSH3 213 aa2.96□□□□□ -1.94
VPS50-214ENST00000477935 ROPN1Q9HAT0 212 aaPredicted RBP2.96□□□□□ -1.94
VPS50-214ENST00000477935 EXOSC1Q9Y3B2 195 aaKnown RBP2.96□□□□□ -1.94
VPS50-214ENST00000477935 PKHD1L1Q86WI1 4243 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 MEIKINA0A087WXM9 373 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 A0A1W2PPE3 182 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 PANO1I0J062 215 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 FFAR1O14842 300 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 DEGS1O15121 323 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 LANCL1O43813 399 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 ENTPD6O75354 484 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 SERPINA3P01011 423 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 IFNA5P01569 189 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 IGLV3-1P01715 115 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 SMR3BP02814 79 aaPredicted RBP2.95□□□□□ -1.94
VPS50-214ENST00000477935 MIFP14174 115 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 PRKACAP17612 351 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 OMPP47874 163 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 LGALS7P47929 136 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 KCNJ3P48549 501 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 CAMLGP49069 296 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 FXYD6P3P58550 94 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 STX3Q13277 289 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 DGCR6Q14129 220 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 PLGLAQ15195 96 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 CYBRD1Q53TN4 286 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 ERICH5Q6P6B1 374 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 DEGS2Q6QHC5 323 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 FAM131AQ6UXB0 335 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 SLC25A26Q70HW3 274 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 TRPM8Q7Z2W7 1104 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 ERASQ7Z444 233 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 CYP4Z1Q86W10 505 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 GPHB5Q86YW7 130 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 MREGQ8N565 214 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 OR51L1Q8NGJ5 315 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 OR51T1Q8NGJ9 327 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 OR10A6Q8NH74 314 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 FCGR1BQ92637 280 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 MARC2Q969Z3 335 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 COQ2Q96H96 371 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 RNF5Q99942 180 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 C20orf27Q9GZN8 174 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 PBOV1Q9GZY1 135 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 COMMD4Q9H0A8 199 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 OR52D1Q9H346 318 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 HMG20AQ9NP66 347 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 GPR84Q9NQS5 396 aa2.95□□□□□ -1.94
VPS50-214ENST00000477935 FAT3Q8TDW7 4589 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 TMEM269A0A1B0GVZ9 245 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 FAM230AA0A1W2PPH8 454 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 SLC22A1O15245 554 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 DEFB4AO15263 64 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 ZNF861PO60384 105 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 GGCTO75223 188 aaKnown RBP2.94□□□□□ -1.94
VPS50-214ENST00000477935 SPAG7O75391 227 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms