RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 FAM90A15PP0C7V4 464 aa8.15□□□□□ -1.1
CMC1-209ENST00000477739 FAM90A13PP0C7W8 464 aa8.15□□□□□ -1.1
CMC1-209ENST00000477739 FAM90A14PP0C7W9 464 aa8.15□□□□□ -1.1
CMC1-209ENST00000477739 FAM90A24PP0C7X0 464 aa8.15□□□□□ -1.1
CMC1-209ENST00000477739 CRISP2P16562 243 aa8.15□□□□□ -1.1
CMC1-209ENST00000477739 ZNF137PP52743 207 aa8.15□□□□□ -1.1
CMC1-209ENST00000477739 RPL31P62899 125 aaKnown RBP8.15□□□□□ -1.1
CMC1-209ENST00000477739 TRAT1Q6PIZ9 186 aa8.15□□□□□ -1.1
CMC1-209ENST00000477739 ZNF295-AS1Q8N0V1 137 aa8.15□□□□□ -1.1
CMC1-209ENST00000477739 MS4A5Q9H3V2 200 aa8.15□□□□□ -1.1
CMC1-209ENST00000477739 SEPSECSQ9HD40 501 aaKnown RBP8.15□□□□□ -1.1
CMC1-209ENST00000477739 ARHGAP32A7KAX9 2087 aa8.15□□□□□ -1.11
CMC1-209ENST00000477739 CSN3P07498 182 aa8.15□□□□□ -1.11
CMC1-209ENST00000477739 GPR6P46095 362 aaPredicted RBP8.15□□□□□ -1.11
CMC1-209ENST00000477739 PNRC1Q12796 327 aaPredicted RBP8.15□□□□□ -1.11
CMC1-209ENST00000477739 RNF151Q2KHN1 245 aa8.15□□□□□ -1.11
CMC1-209ENST00000477739 TEX38Q6PEX7 206 aa8.15□□□□□ -1.11
CMC1-209ENST00000477739 CSPG4Q6UVK1 2322 aa8.15□□□□□ -1.11
CMC1-209ENST00000477739 PQLC2Q6ZP29 291 aa8.15□□□□□ -1.11
CMC1-209ENST00000477739 TMEM183AQ8IXX5 376 aa8.15□□□□□ -1.11
CMC1-209ENST00000477739 ZNF439Q8NDP4 499 aa8.15□□□□□ -1.11
CMC1-209ENST00000477739 OR1L6Q8NGR2 347 aa8.15□□□□□ -1.11
CMC1-209ENST00000477739 CCL13Q99616 98 aa8.15□□□□□ -1.11
CMC1-209ENST00000477739 EGLN1Q9GZT9 426 aa8.15□□□□□ -1.11
CMC1-209ENST00000477739 SPRR3Q9UBC9 169 aa8.15□□□□□ -1.11
CMC1-209ENST00000477739 SVEP1Q4LDE5 3571 aa8.15□□□□□ -1.11
CMC1-209ENST00000477739 TMPRSS2O15393 492 aa8.14□□□□□ -1.11
CMC1-209ENST00000477739 SLC31A2O15432 143 aa8.14□□□□□ -1.11
CMC1-209ENST00000477739 HLA-DRB5Q30154 266 aa8.14□□□□□ -1.11
CMC1-209ENST00000477739 SAXO1Q8IYX7 474 aa8.14□□□□□ -1.11
CMC1-209ENST00000477739 OR10G8Q8NGN5 311 aa8.14□□□□□ -1.11
CMC1-209ENST00000477739 LYPD6BQ8NI32 183 aa8.14□□□□□ -1.11
CMC1-209ENST00000477739 ASH1LQ9NR48 2969 aaKnown RBP8.14□□□□□ -1.11
CMC1-209ENST00000477739 PLSCR2Q9NRY7 297 aa8.14□□□□□ -1.11
CMC1-209ENST00000477739 S4R3C0 116 aa8.14□□□□□ -1.11
CMC1-209ENST00000477739 SMPD2O60906 423 aa8.14□□□□□ -1.11
CMC1-209ENST00000477739 IGFBP2P18065 325 aa8.14□□□□□ -1.11
CMC1-209ENST00000477739 IGHV1-2P23083 117 aa8.14□□□□□ -1.11
CMC1-209ENST00000477739 KRTAP27-1Q3LI81 207 aa8.14□□□□□ -1.11
CMC1-209ENST00000477739 SPRNQ5BIV9 151 aa8.14□□□□□ -1.11
CMC1-209ENST00000477739 TGIF2LYQ8IUE0 185 aa8.14□□□□□ -1.11
CMC1-209ENST00000477739 TNRC18O15417 2968 aaPredicted RBP8.14□□□□□ -1.11
CMC1-209ENST00000477739 MUC21A0A0G2JKD1 596 aa8.14□□□□□ -1.11
CMC1-209ENST00000477739 MUC21A0A140T8X8 626 aa8.14□□□□□ -1.11
CMC1-209ENST00000477739 DUXBA0A1W2PPF3 345 aa8.14□□□□□ -1.11
CMC1-209ENST00000477739 RBFOX2O43251 390 aaKnown RBP eCLIP8.14□□□□□ -1.11
CMC1-209ENST00000477739 ORM2P19652 201 aa8.14□□□□□ -1.11
CMC1-209ENST00000477739 ADMP35318 185 aa8.14□□□□□ -1.11
CMC1-209ENST00000477739 MUC21Q5SSG8 566 aa8.14□□□□□ -1.11
CMC1-209ENST00000477739 BCL2L2Q92843 193 aaPredicted RBP8.14□□□□□ -1.11
CMC1-209ENST00000477739 TLN2Q9Y4G6 2542 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 C2CD3Q4AC94 2353 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 CD82P27701 267 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 PRDX2P32119 198 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 C10orf55Q5SWW7 151 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 REC114Q7Z4M0 266 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 OCC1Q8TAD7 63 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 SSBP4Q9BWG4 385 aaPredicted RBP8.13□□□□□ -1.11
CMC1-209ENST00000477739 CTDSP1Q9GZU7 261 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 FAM208BQ5VWN6 2430 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 ZNF253O75346 499 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 SERF1AO75920 110 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 CDKN1AP38936 164 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 FOXA3P55318 350 aaPredicted RBP8.13□□□□□ -1.11
CMC1-209ENST00000477739 LGALS4P56470 323 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 PMCHL1Q16048 86 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 IQCJQ1A5X6 159 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 C19orf35Q6ZS72 473 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 MIR17HGQ75NE6 70 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 WFDC8Q8IUA0 241 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 RPRMLQ8N4K4 120 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 SIGLECL1Q8N7X8 197 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 FDCSPQ8NFU4 85 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 CCL17Q92583 94 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 OR2V2Q96R30 315 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 PMCHL2Q9BQD1 86 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 RNF24Q9Y225 148 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 HCFC1P51610 2035 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 CENPEQ02224 2701 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 ELOA3CA0A087WX78 387 aaPredicted RBP8.13□□□□□ -1.11
CMC1-209ENST00000477739 TRAV5A0A0B4J249 113 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 NPPCP23582 126 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 LMO1P25800 156 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 SPCS3P61009 180 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 SERF2P84101 59 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 HCP5Q6MZN7 132 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 CYP2G1PQ6ZSU1 146 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 ZNF645Q8N7E2 425 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 OR10W1Q8NGF6 305 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 SPRY4Q9C004 299 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 TMEM140Q9NV12 185 aa8.13□□□□□ -1.11
CMC1-209ENST00000477739 SPENQ96T58 3664 aaKnown RBP8.12□□□□□ -1.11
CMC1-209ENST00000477739 M0QZ24 198 aa8.12□□□□□ -1.11
CMC1-209ENST00000477739 MLNRO43193 412 aa8.12□□□□□ -1.11
CMC1-209ENST00000477739 SMIM21Q3B7S5 101 aa8.12□□□□□ -1.11
CMC1-209ENST00000477739 LCN12Q6JVE5 192 aa8.12□□□□□ -1.11
CMC1-209ENST00000477739 RNASEKQ6P5S7 137 aaKnown RBP8.12□□□□□ -1.11
CMC1-209ENST00000477739 COQ2Q96H96 371 aa8.12□□□□□ -1.11
CMC1-209ENST00000477739 GMPPAQ96IJ6 420 aaPredicted RBP8.12□□□□□ -1.11
CMC1-209ENST00000477739 VAMP8Q9BV40 100 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms