RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 DYNLL1P63167 89 aaKnown RBP1.14□□□□□ -2.23
VPS50-213ENST00000477572 SMAGPQ0VAQ4 97 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 FOXF1Q12946 379 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 EDDM3AQ14507 147 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 RSU1Q15404 277 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 OR8G1Q15617 311 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 PLPPR5Q32ZL2 321 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 CEACAM21Q3KPI0 293 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 TRMT12Q53H54 448 aaKnown RBP1.14□□□□□ -2.23
VPS50-213ENST00000477572 PYCR3Q53H96 274 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 TMEM97Q5BJF2 176 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 TMEM128Q5BJH2 165 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 N4BP2L1Q5TBK1 243 aaPredicted RBP1.14□□□□□ -2.23
VPS50-213ENST00000477572 HBMQ6B0K9 141 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 SFXN4Q6P4A7 337 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 RASSF6Q6ZTQ3 369 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 TCF23Q7RTU1 214 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 SCXQ7RTU7 201 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 C10orf107Q8IVU9 208 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 MUC15Q8N387 334 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 GATD1Q8NB37 220 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 OR8G5Q8NG78 346 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 OR11G2Q8NGC1 345 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 OR4P4Q8NGL7 312 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 OR1L8Q8NGR8 309 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 OR4K15Q8NH41 348 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 OR51Q1Q8NH59 317 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 OR4A5Q8NH83 315 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 MFSD8Q8NHS3 518 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 SLC37A2Q8TED4 501 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 EEF1AKMT1Q8WVE0 214 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 PPCDCQ96CD2 204 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 ZMYND19Q96E35 227 aaPredicted RBP1.14□□□□□ -2.23
VPS50-213ENST00000477572 IMP4Q96G21 291 aaKnown RBP1.14□□□□□ -2.23
VPS50-213ENST00000477572 MRAP2Q96G30 205 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 PYURFQ96I23 114 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 MND1Q9BWT6 205 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 DCSTAMPQ9H295 470 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 SPANXB1Q9NS25 103 aaPredicted RBP1.14□□□□□ -2.23
VPS50-213ENST00000477572 KCNIP2Q9NS61 270 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 IDI2-AS1Q9NZ38 188 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 OPTCQ9UBM4 332 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 ANGPT4Q9Y264 503 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 BTRCQ9Y297 605 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 RBM7Q9Y580 266 aaKnown RBP1.14□□□□□ -2.23
VPS50-213ENST00000477572 BCORL1Q5H9F3 1711 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 MYO15BQ96JP2 1530 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 OVOS2A0A0J9YW53 1432 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 NCOA1Q15788 1441 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 OVOS2Q6IE36 1432 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 SMG6Q86US8 1419 aaKnown RBP1.14□□□□□ -2.23
VPS50-213ENST00000477572 VPS8Q8N3P4 1428 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 RIMS2Q9UQ26 1411 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 DOCK5Q9H7D0 1870 aa1.14□□□□□ -2.23
VPS50-213ENST00000477572 TTC37Q6PGP7 1564 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 HECW2Q9P2P5 1572 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 ECM29Q5VYK3 1845 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 TRAV8-3A0A0A6YYJ7 113 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 DAPL1A0PJW8 107 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 PGPA6NDG6 321 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 TRAPPC2LH3BP13 241 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 TP53I11O14683 189 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 HMGB3O15347 200 aaKnown RBP1.13□□□□□ -2.23
VPS50-213ENST00000477572 FABP7O15540 132 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 SH2D1AO60880 128 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 UGT2B11O75310 529 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 OR7C1O76099 320 aaPredicted RBP1.13□□□□□ -2.23
VPS50-213ENST00000477572 C1QBP02746 253 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 GYPCP04921 128 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 CRYGDP07320 174 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 METTL15P1P0C7V9 234 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 OR13C7P0DN81 318 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 SPI1P17947 270 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 HIST1H1TP22492 207 aaPredicted RBP1.13□□□□□ -2.23
VPS50-213ENST00000477572 SDC4P31431 198 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 GLRXP35754 106 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 EVX1P49640 407 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 TCTAP57738 103 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 TBPL1P62380 186 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 EMX2Q04743 252 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 CDK10Q15131 360 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 NEDD8Q15843 81 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 LRRC26Q2I0M4 334 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 RNASE10Q5GAN6 216 aaKnown RBP1.13□□□□□ -2.23
VPS50-213ENST00000477572 TMEM78Q5T7P6 136 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 SPATA31B1PQ5VZV4 182 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 OR10K2Q6IF99 312 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 ALKAL1Q6UXT8 129 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 LRRC28Q86X40 367 aaPredicted RBP1.13□□□□□ -2.23
VPS50-213ENST00000477572 DOLPP1Q86YN1 238 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 SNX29P2Q8IUI4 249 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 IFT20Q8IY31 132 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 C4orf33Q8N1A6 199 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 UMODL1-AS1Q8N2C9 162 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 SPICQ8N5J4 248 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 ZNF283Q8N7M2 679 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 OR4K17Q8NGC6 315 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 OR52E4Q8NGH9 312 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 OR9I1Q8NGQ6 314 aa1.13□□□□□ -2.23
VPS50-213ENST00000477572 OR5H6Q8NGV6 325 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms