RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 GAB2Q9UQC2 676 aa6.48□□□□□ -1.37
HDAC6-221ENST00000477561 FBXO7Q9Y3I1 522 aa6.48□□□□□ -1.37
HDAC6-221ENST00000477561 TRAV41A0A0B4J266 112 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 H0Y980 276 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 IFNA21P01568 189 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 APOA2P02652 100 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 IGF1P05019 195 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 ELANEP08246 267 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 OR5AC1P0C628 307 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 HLA-GP17693 338 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 CXCL3P19876 107 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 THBS3P49746 956 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 RAP2BP61225 183 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 CX3CL1P78423 397 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 NDPQ00604 133 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 CATR1Q13166 79 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 FOXE3Q13461 319 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 PSG5Q15238 335 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 ECSCRQ19T08 205 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 ZFP69Q49AA0 526 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 KPRPQ5T749 579 aaPredicted RBP6.47□□□□□ -1.37
HDAC6-221ENST00000477561 GSG1LQ6UXU4 331 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 ZNF66Q6ZN08 573 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 TCTEX1D1Q8N7M0 179 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 LINC00482Q8N8I6 264 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 LRTM2Q8N967 370 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.47□□□□□ -1.37
HDAC6-221ENST00000477561 OR5M8Q8NGP6 311 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 ABHD5Q8WTS1 349 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 OR5B12Q96R08 314 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 FAM103A1Q9BTL3 118 aaKnown RBP6.47□□□□□ -1.37
HDAC6-221ENST00000477561 PDCD10Q9BUL8 212 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 KLK15Q9H2R5 256 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 SLC35D1Q9NTN3 355 aa6.47□□□□□ -1.37
HDAC6-221ENST00000477561 METTL1Q9UBP6 276 aaKnown RBP6.47□□□□□ -1.37
HDAC6-221ENST00000477561 DUXBA0A1W2PPF3 345 aa6.46□□□□□ -1.38
HDAC6-221ENST00000477561 C5orf51A6NDU8 294 aa6.46□□□□□ -1.38
HDAC6-221ENST00000477561 DBX1A6NMT0 343 aa6.46□□□□□ -1.38
HDAC6-221ENST00000477561 FAM25EA8MYX2 175 aa6.46□□□□□ -1.38
HDAC6-221ENST00000477561 CCL24O00175 119 aa6.46□□□□□ -1.38
HDAC6-221ENST00000477561 TNFSF12O43508 249 aa6.46□□□□□ -1.38
HDAC6-221ENST00000477561 SLC25A17O43808 307 aa6.46□□□□□ -1.38
HDAC6-221ENST00000477561 SNAPC5O75971 98 aa6.46□□□□□ -1.38
HDAC6-221ENST00000477561 OR2A4O95047 310 aa6.46□□□□□ -1.38
HDAC6-221ENST00000477561 CA2P00918 260 aa6.46□□□□□ -1.38
HDAC6-221ENST00000477561 IGHG4P01861 327 aa6.46□□□□□ -1.38
HDAC6-221ENST00000477561 C1QBP02746 253 aa6.46□□□□□ -1.38
HDAC6-221ENST00000477561 SERPINE2P07093 398 aa6.46□□□□□ -1.38
HDAC6-221ENST00000477561 F2RP25116 425 aa6.46□□□□□ -1.38
HDAC6-221ENST00000477561 PSMB8P28062 276 aa6.46□□□□□ -1.38
HDAC6-221ENST00000477561 PPIFP30405 207 aaKnown RBP6.46□□□□□ -1.38
HDAC6-221ENST00000477561 HOXD3P31249 432 aaPredicted RBP6.46□□□□□ -1.38
HDAC6-221ENST00000477561 MYCNOSP40205 109 aa6.46□□□□□ -1.38
HDAC6-221ENST00000477561 EIF2B2P49770 351 aaKnown RBP6.46□□□□□ -1.38
HDAC6-221ENST00000477561 CYCSP99999 105 aaKnown RBP6.46□□□□□ -1.38
HDAC6-221ENST00000477561 FGL1Q08830 312 aa6.46□□□□□ -1.38
HDAC6-221ENST00000477561 TMEM187Q14656 261 aa6.46□□□□□ -1.38
HDAC6-221ENST00000477561 ANKRD55Q3KP44 614 aa6.46□□□□□ -1.38
HDAC6-221ENST00000477561 TMEM65Q6PI78 240 aa6.46□□□□□ -1.38
HDAC6-221ENST00000477561 IL22RA2Q969J5 263 aa6.46□□□□□ -1.38
HDAC6-221ENST00000477561 FLYWCH2Q96CP2 140 aaKnown RBP6.46□□□□□ -1.38
HDAC6-221ENST00000477561 RAX2Q96IS3 184 aa6.46□□□□□ -1.38
HDAC6-221ENST00000477561 TMEM56Q96MV1 263 aa6.46□□□□□ -1.38
HDAC6-221ENST00000477561 FYTTD1Q96QD9 318 aaKnown RBP6.46□□□□□ -1.38
HDAC6-221ENST00000477561 OR2A7Q96R45 310 aa6.46□□□□□ -1.38
HDAC6-221ENST00000477561 TSNAXQ99598 290 aaKnown RBP6.46□□□□□ -1.38
HDAC6-221ENST00000477561 HSD17B10Q99714 261 aaKnown RBP6.46□□□□□ -1.38
HDAC6-221ENST00000477561 TMEM222Q9H0R3 208 aa6.46□□□□□ -1.38
HDAC6-221ENST00000477561 TPSG1Q9NRR2 321 aa6.46□□□□□ -1.38
HDAC6-221ENST00000477561 FAM212BQ9NTI7 297 aaPredicted RBP6.46□□□□□ -1.38
HDAC6-221ENST00000477561 TMEM56-RWDD3S4R434 201 aa6.46□□□□□ -1.38
HDAC6-221ENST00000477561 DNAH3Q8TD57 4116 aa6.46□□□□□ -1.38
HDAC6-221ENST00000477561 TGP01266 2768 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 A0A1W2PN81 502 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 LINC00473A8K010 186 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 BOLA2-SMG1P6H3BVE0 249 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 ATG12O94817 140 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 IGLV1-40P01703 118 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 IGLV2-14P01704 120 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 EGR2P11161 476 aaPredicted RBP6.45□□□□□ -1.38
HDAC6-221ENST00000477561 RPA2P15927 270 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 UCP1P25874 307 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 CHRNA7P36544 502 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 KIR2DS2P43631 304 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 CDX1P47902 265 aaPredicted RBP6.45□□□□□ -1.38
HDAC6-221ENST00000477561 GNB1P62873 340 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 CD300CQ08708 224 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 PJVKQ0ZLH3 352 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 SP6Q3SY56 376 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 LINC01559Q495D7 138 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 C4orf48Q5BLP8 95 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 PPP1R27Q86WC6 154 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 PDPNQ86YL7 162 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 RNF152Q8N8N0 203 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 LFNGQ8NES3 379 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 OR2T35Q8NGX2 323 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 OR51H1Q8NH63 302 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 CD300LFQ8TDQ1 290 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 GLYATL2Q8WU03 294 aa6.45□□□□□ -1.38
HDAC6-221ENST00000477561 RCC1LQ96I51 464 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms