RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 MPTX1A8MV57 137 aa12.8□□□□□ -0.36
VHL-203ENST00000477538 GOSR2O14653 212 aa12.8□□□□□ -0.36
VHL-203ENST00000477538 KCNAB3O43448 404 aa12.8□□□□□ -0.36
VHL-203ENST00000477538 CNIH1O95406 144 aa12.8□□□□□ -0.36
VHL-203ENST00000477538 IGHG2P01859 326 aa12.8□□□□□ -0.36
VHL-203ENST00000477538 SLC25A6P12236 298 aa12.8□□□□□ -0.36
VHL-203ENST00000477538 MYOD1P15172 320 aa12.8□□□□□ -0.36
VHL-203ENST00000477538 COMPP49747 757 aaPredicted RBP12.8□□□□□ -0.36
VHL-203ENST00000477538 NDPQ00604 133 aa12.8□□□□□ -0.36
VHL-203ENST00000477538 FXYD3Q14802 87 aa12.8□□□□□ -0.36
VHL-203ENST00000477538 C2orf68Q2NKX9 166 aa12.8□□□□□ -0.36
VHL-203ENST00000477538 ARSJQ5FYB0 599 aaPredicted RBP12.8□□□□□ -0.36
VHL-203ENST00000477538 C10orf55Q5SWW7 151 aa12.8□□□□□ -0.36
VHL-203ENST00000477538 Q6ZSV7 163 aa12.8□□□□□ -0.36
VHL-203ENST00000477538 SLC35E3Q7Z769 313 aa12.8□□□□□ -0.36
VHL-203ENST00000477538 ABHD5Q8WTS1 349 aa12.8□□□□□ -0.36
VHL-203ENST00000477538 ARPC1AQ92747 370 aa12.8□□□□□ -0.36
VHL-203ENST00000477538 COMMD5Q9GZQ3 224 aa12.8□□□□□ -0.36
VHL-203ENST00000477538 MED28Q9H204 178 aa12.8□□□□□ -0.36
VHL-203ENST00000477538 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.8□□□□□ -0.36
VHL-203ENST00000477538 COA4Q9NYJ1 87 aa12.8□□□□□ -0.36
VHL-203ENST00000477538 FKBP11Q9NYL4 201 aa12.8□□□□□ -0.36
VHL-203ENST00000477538 FOXA2Q9Y261 457 aaPredicted RBP12.8□□□□□ -0.36
VHL-203ENST00000477538 OR51B2Q9Y5P1 312 aa12.8□□□□□ -0.36
VHL-203ENST00000477538 C5orf51A6NDU8 294 aa12.79□□□□□ -0.36
VHL-203ENST00000477538 FAM25EA8MYX2 175 aa12.79□□□□□ -0.36
VHL-203ENST00000477538 OPN1MWP04001 364 aa12.79□□□□□ -0.36
VHL-203ENST00000477538 OPN1MW2P0DN77 364 aa12.79□□□□□ -0.36
VHL-203ENST00000477538 OPN1MW3P0DN78 364 aa12.79□□□□□ -0.36
VHL-203ENST00000477538 RPL27AP46776 148 aaKnown RBP12.79□□□□□ -0.36
VHL-203ENST00000477538 GSG1LQ6UXU4 331 aa12.79□□□□□ -0.36
VHL-203ENST00000477538 ZNF429Q86V71 674 aa12.79□□□□□ -0.36
VHL-203ENST00000477538 OR1S1Q8NH92 325 aa12.79□□□□□ -0.36
VHL-203ENST00000477538 GRPEL2Q8TAA5 225 aa12.79□□□□□ -0.36
VHL-203ENST00000477538 SRSF12Q8WXF0 261 aaKnown RBP12.79□□□□□ -0.36
VHL-203ENST00000477538 TAF15Q92804 592 aaKnown RBP eCLIP12.79□□□□□ -0.36
VHL-203ENST00000477538 OR10C1Q96KK4 312 aa12.79□□□□□ -0.36
VHL-203ENST00000477538 QTRT1Q9BXR0 403 aaKnown RBP12.79□□□□□ -0.36
VHL-203ENST00000477538 PARP11Q9NR21 331 aa12.79□□□□□ -0.36
VHL-203ENST00000477538 TEX50A0A1B0GTY4 177 aa12.78□□□□□ -0.36
VHL-203ENST00000477538 C13orf42A0A1B0GVH6 325 aa12.78□□□□□ -0.36
VHL-203ENST00000477538 LINC01548A6NM66 108 aa12.78□□□□□ -0.36
VHL-203ENST00000477538 ATP6V0E1O15342 81 aa12.78□□□□□ -0.36
VHL-203ENST00000477538 ST8SIA3O43173 380 aa12.78□□□□□ -0.36
VHL-203ENST00000477538 TSPAN9O75954 239 aa12.78□□□□□ -0.36
VHL-203ENST00000477538 IAH1Q2TAA2 248 aaPredicted RBP12.78□□□□□ -0.36
VHL-203ENST00000477538 PRIMA1Q86XR5 153 aa12.78□□□□□ -0.36
VHL-203ENST00000477538 Q8N2B8 174 aa12.78□□□□□ -0.36
VHL-203ENST00000477538 OR5M8Q8NGP6 311 aa12.78□□□□□ -0.36
VHL-203ENST00000477538 OR1L8Q8NGR8 309 aa12.78□□□□□ -0.36
VHL-203ENST00000477538 OR5B3Q8NH48 314 aa12.78□□□□□ -0.36
VHL-203ENST00000477538 PDCD10Q9BUL8 212 aa12.78□□□□□ -0.36
VHL-203ENST00000477538 MGAT4CQ9UBM8 478 aa12.78□□□□□ -0.36
VHL-203ENST00000477538 ZNF257Q9Y2Q1 563 aa12.78□□□□□ -0.36
VHL-203ENST00000477538 FBXO7Q9Y3I1 522 aa12.78□□□□□ -0.36
VHL-203ENST00000477538 PITX3O75364 302 aa12.77□□□□□ -0.37
VHL-203ENST00000477538 NXPH3O95157 252 aa12.77□□□□□ -0.37
VHL-203ENST00000477538 NDUFA7O95182 113 aa12.77□□□□□ -0.37
VHL-203ENST00000477538 SIX6O95475 246 aa12.77□□□□□ -0.37
VHL-203ENST00000477538 IFNA17P01571 189 aa12.77□□□□□ -0.37
VHL-203ENST00000477538 RRAS2P62070 204 aaPredicted RBP12.77□□□□□ -0.37
VHL-203ENST00000477538 TMEM95Q3KNT9 176 aa12.77□□□□□ -0.37
VHL-203ENST00000477538 AARDQ4LEZ3 155 aa12.77□□□□□ -0.37
VHL-203ENST00000477538 OR2T6Q8NHC8 308 aa12.77□□□□□ -0.37
VHL-203ENST00000477538 C2orf50Q96LR7 162 aa12.77□□□□□ -0.37
VHL-203ENST00000477538 FYTTD1Q96QD9 318 aaKnown RBP12.77□□□□□ -0.37
VHL-203ENST00000477538 FAM103A1Q9BTL3 118 aaKnown RBP12.77□□□□□ -0.37
VHL-203ENST00000477538 HINT2Q9BX68 163 aa12.77□□□□□ -0.37
VHL-203ENST00000477538 MSGN1A6NI15 193 aa12.76□□□□□ -0.37
VHL-203ENST00000477538 CGB1A6NKQ9 187 aa12.76□□□□□ -0.37
VHL-203ENST00000477538 E7EUB6 86 aa12.76□□□□□ -0.37
VHL-203ENST00000477538 AP4M1O00189 453 aa12.76□□□□□ -0.37
VHL-203ENST00000477538 TRAPPC2P0DI81 140 aa12.76□□□□□ -0.37
VHL-203ENST00000477538 TRAPPC2BP0DI82 140 aa12.76□□□□□ -0.37
VHL-203ENST00000477538 VDAC2P45880 294 aaPredicted RBP12.76□□□□□ -0.37
VHL-203ENST00000477538 HSPE1P61604 102 aaKnown RBP12.76□□□□□ -0.37
VHL-203ENST00000477538 FCN2Q15485 313 aa12.76□□□□□ -0.37
VHL-203ENST00000477538 ZBTB8BQ8NAP8 495 aaPredicted RBP12.76□□□□□ -0.37
VHL-203ENST00000477538 OR4D5Q8NGN0 318 aa12.76□□□□□ -0.37
VHL-203ENST00000477538 OR52E5Q8NH55 327 aa12.76□□□□□ -0.37
VHL-203ENST00000477538 SGMS2Q8NHU3 365 aa12.76□□□□□ -0.37
VHL-203ENST00000477538 NDUFA4L2Q9NRX3 87 aa12.76□□□□□ -0.37
VHL-203ENST00000477538 GSKIPQ9P0R6 139 aa12.76□□□□□ -0.37
VHL-203ENST00000477538 A0A1B0GW64 132 aa12.75□□□□□ -0.37
VHL-203ENST00000477538 IGF1P05019 195 aa12.75□□□□□ -0.37
VHL-203ENST00000477538 EGR2P11161 476 aaPredicted RBP12.75□□□□□ -0.37
VHL-203ENST00000477538 CRIP2P52943 208 aaPredicted RBP12.75□□□□□ -0.37
VHL-203ENST00000477538 SPCS3P61009 180 aa12.75□□□□□ -0.37
VHL-203ENST00000477538 PRCDQ00LT1 54 aa12.75□□□□□ -0.37
VHL-203ENST00000477538 ECSCRQ19T08 205 aa12.75□□□□□ -0.37
VHL-203ENST00000477538 SPINK9Q5DT21 86 aa12.75□□□□□ -0.37
VHL-203ENST00000477538 NOL4LQ96MY1 436 aaPredicted RBP12.75□□□□□ -0.37
VHL-203ENST00000477538 C16orf95Q9H693 158 aa12.75□□□□□ -0.37
VHL-203ENST00000477538 HSPB7Q9UBY9 170 aa12.75□□□□□ -0.37
VHL-203ENST00000477538 CACFD1Q9UGQ2 172 aa12.75□□□□□ -0.37
VHL-203ENST00000477538 LINC00527Q9UJ94 153 aa12.75□□□□□ -0.37
VHL-203ENST00000477538 hCG_2014768A0A024R1R8 64 aa12.74□□□□□ -0.37
VHL-203ENST00000477538 HMX3A6NHT5 357 aa12.74□□□□□ -0.37
VHL-203ENST00000477538 TEX22C9J3V5 150 aa12.74□□□□□ -0.37
VHL-203ENST00000477538 FAM90A26D6RGX4 464 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms