RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 WASHC3Q9Y3C0 194 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 FBXO7Q9Y3I1 522 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 SPTBN1Q01082 2364 aaKnown RBP5.44□□□□□ -1.54
LDB3-206ENST00000477489 ITPR2Q14571 2701 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 BOD1L1Q8NFC6 3051 aa5.44□□□□□ -1.54
LDB3-206ENST00000477489 YLPM1P49750 1951 aaKnown RBP5.44□□□□□ -1.54
LDB3-206ENST00000477489 NBASA2RRP1 2371 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 PPIAL4CA0A0B4J2A2 164 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 PMS2P5A8MQ11 134 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 C17orf112F2Z3M2 114 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 H7C2Y5 167 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 OVOL3O00110 214 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 NDUFS8O00217 210 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 UPK2O00526 184 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 FBXO24O75426 580 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 FCN3O75636 299 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 MMP23AO75900 390 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 CST7O76096 145 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 CRYZL1O95825 349 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 TSPAN15O95858 294 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 IFNA17P01571 189 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 IGLV1-47P01700 117 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 PRH1P02810 166 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 SOD3P08294 240 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 OR9G9P0C7N8 305 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 PPIAL4GP0DN37 164 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 CCL3L1P16619 93 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 MAS1LP35410 378 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 CEACAM3P40198 252 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 VDAC2P45880 294 aaPredicted RBP5.43□□□□□ -1.54
LDB3-206ENST00000477489 GPR6P46095 362 aaPredicted RBP5.43□□□□□ -1.54
LDB3-206ENST00000477489 DVL1P1P54792 670 aaPredicted RBP5.43□□□□□ -1.54
LDB3-206ENST00000477489 OR2B8PP59922 312 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 DLK1P80370 383 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 PRCDQ00LT1 54 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 CLINT1Q14677 625 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 PEA15Q15121 130 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 HLA-DRB5Q30154 266 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 VMA21Q3ZAQ7 101 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 OR2B11Q5JQS5 317 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 SPANXN5Q5MJ07 72 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 C10orf91Q5T1B1 145 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 AKR1C8PQ5T2L2 129 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 SLC25A24Q6NUK1 477 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 Q6ZRG5 221 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 TGIF2LXQ8IUE1 241 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 ABHD12Q8N2K0 398 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 C11orf42Q8N5U0 333 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 HSD17B11Q8NBQ5 300 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 OR11H6Q8NGC7 330 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 OR13D1Q8NGV5 346 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 LHX4Q969G2 390 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 FLYWCH2Q96CP2 140 aaKnown RBP5.43□□□□□ -1.54
LDB3-206ENST00000477489 WDR61Q9GZS3 305 aaKnown RBP5.43□□□□□ -1.54
LDB3-206ENST00000477489 ENY2Q9NPA8 101 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 UQCC1Q9NVA1 299 aa5.43□□□□□ -1.54
LDB3-206ENST00000477489 FBN3Q75N90 2809 aa5.42□□□□□ -1.54
LDB3-206ENST00000477489 CSMD1Q96PZ7 3565 aa5.42□□□□□ -1.54
LDB3-206ENST00000477489 ZFHX3Q15911 3703 aa5.42□□□□□ -1.54
LDB3-206ENST00000477489 IGHV2-26A0A0B4J1V2 119 aa5.42□□□□□ -1.54
LDB3-206ENST00000477489 A0A1W2PN81 502 aa5.42□□□□□ -1.54
LDB3-206ENST00000477489 TMEM218A2RU14 115 aa5.42□□□□□ -1.54
LDB3-206ENST00000477489 KBTBD11O94819 623 aa5.42□□□□□ -1.54
LDB3-206ENST00000477489 CD5P06127 495 aa5.42□□□□□ -1.54
LDB3-206ENST00000477489 METTL15P1P0C7V9 234 aa5.42□□□□□ -1.54
LDB3-206ENST00000477489 IAPPP10997 89 aa5.42□□□□□ -1.54
LDB3-206ENST00000477489 MDKP21741 143 aaPredicted RBP5.42□□□□□ -1.54
LDB3-206ENST00000477489 PRTN3P24158 256 aa5.42□□□□□ -1.54
LDB3-206ENST00000477489 CHRNA7P36544 502 aa5.42□□□□□ -1.54
LDB3-206ENST00000477489 UQCRFS1P47985 274 aa5.42□□□□□ -1.54
LDB3-206ENST00000477489 COMPP49747 757 aaPredicted RBP5.42□□□□□ -1.54
LDB3-206ENST00000477489 GNG10P50151 68 aa5.42□□□□□ -1.54
LDB3-206ENST00000477489 TMEM249Q2WGJ8 235 aa5.42□□□□□ -1.54
LDB3-206ENST00000477489 FAM53AQ6NSI3 398 aaPredicted RBP5.42□□□□□ -1.54
LDB3-206ENST00000477489 CCDC144NLQ6NUI1 221 aa5.42□□□□□ -1.54
LDB3-206ENST00000477489 TMEM217Q8N7C4 229 aa5.42□□□□□ -1.54
LDB3-206ENST00000477489 TEX45Q8NA69 505 aa5.42□□□□□ -1.54
LDB3-206ENST00000477489 TMEM167AQ8TBQ9 72 aa5.42□□□□□ -1.54
LDB3-206ENST00000477489 IGFBPL1Q8WX77 278 aa5.42□□□□□ -1.54
LDB3-206ENST00000477489 TAF15Q92804 592 aaKnown RBP eCLIP5.42□□□□□ -1.54
LDB3-206ENST00000477489 BSCL2Q96G97 398 aaPredicted RBP5.42□□□□□ -1.54
LDB3-206ENST00000477489 FANCD2OSQ96PS1 177 aa5.42□□□□□ -1.54
LDB3-206ENST00000477489 OR4C12Q96R67 309 aa5.42□□□□□ -1.54
LDB3-206ENST00000477489 NABP2Q9BQ15 211 aa5.42□□□□□ -1.54
LDB3-206ENST00000477489 SRSF8Q9BRL6 282 aaKnown RBP5.42□□□□□ -1.54
LDB3-206ENST00000477489 SSBP3Q9BWW4 388 aaPredicted RBP5.42□□□□□ -1.54
LDB3-206ENST00000477489 QTRT1Q9BXR0 403 aaKnown RBP5.42□□□□□ -1.54
LDB3-206ENST00000477489 SEC11CQ9BY50 192 aa5.42□□□□□ -1.54
LDB3-206ENST00000477489 KIAA1456Q9P272 454 aa5.42□□□□□ -1.54
LDB3-206ENST00000477489 TCF19Q9Y242 345 aa5.42□□□□□ -1.54
LDB3-206ENST00000477489 CARHSP1Q9Y2V2 147 aaKnown RBP5.42□□□□□ -1.54
LDB3-206ENST00000477489 POLR3KQ9Y2Y1 108 aaPredicted RBP5.42□□□□□ -1.54
LDB3-206ENST00000477489 KPTNQ9Y664 436 aa5.42□□□□□ -1.54
LDB3-206ENST00000477489 POLQO75417 2590 aa5.41□□□□□ -1.54
LDB3-206ENST00000477489 MALRD1Q5VYJ5 2156 aa5.41□□□□□ -1.54
LDB3-206ENST00000477489 LOC105371242A0A075B767 164 aa5.41□□□□□ -1.54
LDB3-206ENST00000477489 H3BP45 60 aa5.41□□□□□ -1.54
LDB3-206ENST00000477489 BUB1B-PAK6H3BSN5 160 aa5.41□□□□□ -1.54
LDB3-206ENST00000477489 ENSAO43768 121 aaKnown RBP5.41□□□□□ -1.54
LDB3-206ENST00000477489 SNCAP37840 140 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms