RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 LHFPL1Q86WI0 220 aa11.87□□□□□ -0.51
COMMD6-209ENST00000477377 CLVS1Q8IUQ0 354 aaPredicted RBP11.87□□□□□ -0.51
COMMD6-209ENST00000477377 FAM223AQ8IWN6 122 aa11.87□□□□□ -0.51
COMMD6-209ENST00000477377 DYNC2LI1Q8TCX1 351 aa11.87□□□□□ -0.51
COMMD6-209ENST00000477377 CD300LFQ8TDQ1 290 aa11.87□□□□□ -0.51
COMMD6-209ENST00000477377 DGCR14Q96DF8 476 aaKnown RBP11.87□□□□□ -0.51
COMMD6-209ENST00000477377 IGLC7A0M8Q6 106 aa11.86□□□□□ -0.51
COMMD6-209ENST00000477377 M0QYG6 137 aa11.86□□□□□ -0.51
COMMD6-209ENST00000477377 NDUFB8O95169 186 aa11.86□□□□□ -0.51
COMMD6-209ENST00000477377 IGLV1-51P01701 117 aa11.86□□□□□ -0.51
COMMD6-209ENST00000477377 FGF2P09038 288 aa11.86□□□□□ -0.51
COMMD6-209ENST00000477377 RPA2P15927 270 aa11.86□□□□□ -0.51
COMMD6-209ENST00000477377 LPAR6P43657 344 aa11.86□□□□□ -0.51
COMMD6-209ENST00000477377 MECP2P51608 486 aaKnown RBP11.86□□□□□ -0.51
COMMD6-209ENST00000477377 UCP3P55916 312 aa11.86□□□□□ -0.51
COMMD6-209ENST00000477377 SYNJ2BPP57105 145 aa11.86□□□□□ -0.51
COMMD6-209ENST00000477377 ATP5G2Q06055 141 aa11.86□□□□□ -0.51
COMMD6-209ENST00000477377 RNASE12Q5GAN4 147 aaKnown RBP11.86□□□□□ -0.51
COMMD6-209ENST00000477377 ADAMTSL5Q6ZMM2 481 aa11.86□□□□□ -0.51
COMMD6-209ENST00000477377 CADM3Q8N126 398 aa11.86□□□□□ -0.51
COMMD6-209ENST00000477377 NECAP1Q8NC96 275 aa11.86□□□□□ -0.51
COMMD6-209ENST00000477377 OR9G4Q8NGQ1 327 aa11.86□□□□□ -0.51
COMMD6-209ENST00000477377 BORCS5Q969J3 196 aa11.86□□□□□ -0.51
COMMD6-209ENST00000477377 HRASLSQ9HDD0 168 aa11.86□□□□□ -0.51
COMMD6-209ENST00000477377 COMMD9Q9P000 198 aa11.86□□□□□ -0.51
COMMD6-209ENST00000477377 MTFP1Q9UDX5 166 aa11.86□□□□□ -0.51
COMMD6-209ENST00000477377 IGLV11-55A0A075B6I3 123 aa11.85□□□□□ -0.51
COMMD6-209ENST00000477377 IGKV1-39P01597 117 aa11.85□□□□□ -0.51
COMMD6-209ENST00000477377 IGKV1D-39P04432 117 aa11.85□□□□□ -0.51
COMMD6-209ENST00000477377 CSN3P07498 182 aa11.85□□□□□ -0.51
COMMD6-209ENST00000477377 GP9P14770 177 aa11.85□□□□□ -0.51
COMMD6-209ENST00000477377 TMBIM6P55061 237 aa11.85□□□□□ -0.51
COMMD6-209ENST00000477377 EXOSC2Q13868 293 aaKnown RBP11.85□□□□□ -0.51
COMMD6-209ENST00000477377 C15orf32Q32M92 178 aa11.85□□□□□ -0.51
COMMD6-209ENST00000477377 PHLDA2Q53GA4 152 aa11.85□□□□□ -0.51
COMMD6-209ENST00000477377 SLC25A42Q86VD7 318 aa11.85□□□□□ -0.51
COMMD6-209ENST00000477377 LAX1Q8IWV1 398 aa11.85□□□□□ -0.51
COMMD6-209ENST00000477377 OR4D10Q8NGI6 311 aa11.85□□□□□ -0.51
COMMD6-209ENST00000477377 CCDC140Q96MF4 163 aa11.85□□□□□ -0.51
COMMD6-209ENST00000477377 AIFM2Q9BRQ8 373 aa11.85□□□□□ -0.51
COMMD6-209ENST00000477377 FBXL7Q9UJT9 491 aa11.85□□□□□ -0.51
COMMD6-209ENST00000477377 TEX50A0A1B0GTY4 177 aa11.84□□□□□ -0.51
COMMD6-209ENST00000477377 DBX1A6NMT0 343 aa11.84□□□□□ -0.51
COMMD6-209ENST00000477377 MARCH11A6NNE9 402 aa11.84□□□□□ -0.51
COMMD6-209ENST00000477377 CD74P04233 296 aa11.84□□□□□ -0.51
COMMD6-209ENST00000477377 CD3DP04234 171 aa11.84□□□□□ -0.51
COMMD6-209ENST00000477377 REG1AP05451 166 aa11.84□□□□□ -0.51
COMMD6-209ENST00000477377 PTBP1P26599 531 aaKnown RBP eCLIP11.84□□□□□ -0.51
COMMD6-209ENST00000477377 G6PCP35575 357 aa11.84□□□□□ -0.51
COMMD6-209ENST00000477377 TSPAN5P62079 268 aa11.84□□□□□ -0.51
COMMD6-209ENST00000477377 TBC1D26Q86UD7 250 aa11.84□□□□□ -0.51
COMMD6-209ENST00000477377 Q8N1Y9 231 aa11.84□□□□□ -0.51
COMMD6-209ENST00000477377 OR10W1Q8NGF6 305 aa11.84□□□□□ -0.51
COMMD6-209ENST00000477377 RAB2BQ8WUD1 216 aa11.84□□□□□ -0.51
COMMD6-209ENST00000477377 MRGPRFQ96AM1 343 aa11.84□□□□□ -0.51
COMMD6-209ENST00000477377 KMT2CQ8NEZ4 4911 aaKnown RBP11.83□□□□□ -0.52
COMMD6-209ENST00000477377 PPP5D1E7EU14 171 aa11.83□□□□□ -0.52
COMMD6-209ENST00000477377 EDN2P20800 178 aa11.83□□□□□ -0.52
COMMD6-209ENST00000477377 RPL5P46777 297 aaKnown RBP11.83□□□□□ -0.52
COMMD6-209ENST00000477377 WT1-ASQ06250 92 aa11.83□□□□□ -0.52
COMMD6-209ENST00000477377 CD69Q07108 199 aa11.83□□□□□ -0.52
COMMD6-209ENST00000477377 LPCAT3Q6P1A2 487 aa11.83□□□□□ -0.52
COMMD6-209ENST00000477377 CMTM1Q8IZ96 169 aa11.83□□□□□ -0.52
COMMD6-209ENST00000477377 DMBX1Q8NFW5 382 aa11.83□□□□□ -0.52
COMMD6-209ENST00000477377 OR6Q1Q8NGQ2 317 aa11.83□□□□□ -0.52
COMMD6-209ENST00000477377 OR4C12Q96R67 309 aa11.83□□□□□ -0.52
COMMD6-209ENST00000477377 BCL7BQ9BQE9 202 aa11.83□□□□□ -0.52
COMMD6-209ENST00000477377 THAP7Q9BT49 309 aaPredicted RBP11.83□□□□□ -0.52
COMMD6-209ENST00000477377 ELOVL1Q9BW60 279 aa11.83□□□□□ -0.52
COMMD6-209ENST00000477377 SLIRPQ9GZT3 109 aaKnown RBP11.83□□□□□ -0.52
COMMD6-209ENST00000477377 NDUFA4L2Q9NRX3 87 aa11.83□□□□□ -0.52
COMMD6-209ENST00000477377 FAM212BQ9NTI7 297 aaPredicted RBP11.83□□□□□ -0.52
COMMD6-209ENST00000477377 SIGLEC8Q9NYZ4 499 aa11.83□□□□□ -0.52
COMMD6-209ENST00000477377 NSG2Q9Y328 171 aa11.83□□□□□ -0.52
COMMD6-209ENST00000477377 S4R3C0 116 aa11.83□□□□□ -0.52
COMMD6-209ENST00000477377 H3BMQ9 156 aa11.82□□□□□ -0.52
COMMD6-209ENST00000477377 KRASP01116 189 aa11.82□□□□□ -0.52
COMMD6-209ENST00000477377 IGHV3-23P01764 117 aa11.82□□□□□ -0.52
COMMD6-209ENST00000477377 HLA-AP01891 365 aaKnown RBP11.82□□□□□ -0.52
COMMD6-209ENST00000477377 MFAP2P55001 183 aa11.82□□□□□ -0.52
COMMD6-209ENST00000477377 DCTN2Q13561 401 aaKnown RBP11.82□□□□□ -0.52
COMMD6-209ENST00000477377 RPEL1Q2QD12 228 aa11.82□□□□□ -0.52
COMMD6-209ENST00000477377 SLC38A6Q8IZM9 456 aa11.82□□□□□ -0.52
COMMD6-209ENST00000477377 TMEM229BQ8NBD8 167 aa11.82□□□□□ -0.52
COMMD6-209ENST00000477377 SEC22AQ96IW7 307 aa11.82□□□□□ -0.52
COMMD6-209ENST00000477377 SOSTQ9BQB4 213 aa11.82□□□□□ -0.52
COMMD6-209ENST00000477377 SRSF8Q9BRL6 282 aaKnown RBP11.82□□□□□ -0.52
COMMD6-209ENST00000477377 CCDC59Q9P031 241 aaKnown RBP11.82□□□□□ -0.52
COMMD6-209ENST00000477377 CEPT1Q9Y6K0 416 aa11.82□□□□□ -0.52
COMMD6-209ENST00000477377 DPPA5A6NC42 116 aa11.81□□□□□ -0.52
COMMD6-209ENST00000477377 MFSD2BA6NFX1 497 aa11.81□□□□□ -0.52
COMMD6-209ENST00000477377 GABARAPH6UMI1 98 aa11.81□□□□□ -0.52
COMMD6-209ENST00000477377 LY86O95711 162 aa11.81□□□□□ -0.52
COMMD6-209ENST00000477377 PI3P19957 117 aa11.81□□□□□ -0.52
COMMD6-209ENST00000477377 RND3P61587 244 aa11.81□□□□□ -0.52
COMMD6-209ENST00000477377 ISOC1Q96CN7 298 aa11.81□□□□□ -0.52
COMMD6-209ENST00000477377 QTRT1Q9BXR0 403 aaKnown RBP11.81□□□□□ -0.52
COMMD6-209ENST00000477377 COMMD5Q9GZQ3 224 aa11.81□□□□□ -0.52
COMMD6-209ENST00000477377 NXF2Q9GZY0 626 aaKnown RBP11.81□□□□□ -0.52
COMMD6-209ENST00000477377 SMAD5-AS1Q9Y6J3 95 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms