RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 PLGRKTQ9HBL7 147 aa8.3□□□□□ -1.08
BRCA1-213ENST00000476777 MRPS7Q9Y2R9 242 aaKnown RBP8.3□□□□□ -1.08
BRCA1-213ENST00000476777 PRELID3BQ9Y3B1 194 aa8.3□□□□□ -1.08
BRCA1-213ENST00000476777 J3QRK9 145 aa8.29□□□□□ -1.08
BRCA1-213ENST00000476777 TGOLN2O43493 480 aa8.29□□□□□ -1.08
BRCA1-213ENST00000476777 IGLV2-14P01704 120 aa8.29□□□□□ -1.08
BRCA1-213ENST00000476777 CTSDP07339 412 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-213ENST00000476777 PTBP1P26599 531 aaKnown RBP eCLIP8.29□□□□□ -1.08
BRCA1-213ENST00000476777 CLDN12P56749 244 aa8.29□□□□□ -1.08
BRCA1-213ENST00000476777 BRWD1-AS2P59051 145 aa8.29□□□□□ -1.08
BRCA1-213ENST00000476777 PLA2G7Q13093 441 aa8.29□□□□□ -1.08
BRCA1-213ENST00000476777 RAB11BQ15907 218 aa8.29□□□□□ -1.08
BRCA1-213ENST00000476777 SSX9Q7RTT3 188 aa8.29□□□□□ -1.08
BRCA1-213ENST00000476777 OR4A5Q8NH83 315 aa8.29□□□□□ -1.08
BRCA1-213ENST00000476777 FAM3DQ96BQ1 224 aa8.29□□□□□ -1.08
BRCA1-213ENST00000476777 RAB3CQ96E17 227 aa8.29□□□□□ -1.08
BRCA1-213ENST00000476777 PSORS1C1Q9UIG5 152 aa8.29□□□□□ -1.08
BRCA1-213ENST00000476777 RBMX2Q9Y388 322 aaKnown RBP8.29□□□□□ -1.08
BRCA1-213ENST00000476777 AGRNO00468 2067 aa8.29□□□□□ -1.08
BRCA1-213ENST00000476777 IGKV1D-8A0A087WSZ0 117 aa8.28□□□□□ -1.08
BRCA1-213ENST00000476777 RAB27BO00194 218 aa8.28□□□□□ -1.08
BRCA1-213ENST00000476777 DENRO43583 198 aaKnown RBP8.28□□□□□ -1.08
BRCA1-213ENST00000476777 GNB3P16520 340 aa8.28□□□□□ -1.08
BRCA1-213ENST00000476777 CRHBPP24387 322 aa8.28□□□□□ -1.08
BRCA1-213ENST00000476777 OR2B8PP59922 312 aa8.28□□□□□ -1.08
BRCA1-213ENST00000476777 RPL8P62917 257 aaKnown RBP8.28□□□□□ -1.08
BRCA1-213ENST00000476777 C2orf76Q3KRA6 126 aa8.28□□□□□ -1.08
BRCA1-213ENST00000476777 LAIR2Q6ISS4 152 aa8.28□□□□□ -1.08
BRCA1-213ENST00000476777 Q6ZS49 121 aa8.28□□□□□ -1.08
BRCA1-213ENST00000476777 AHSA2Q719I0 299 aa8.28□□□□□ -1.08
BRCA1-213ENST00000476777 OR4S2Q8NH73 311 aa8.28□□□□□ -1.08
BRCA1-213ENST00000476777 HRH4Q9H3N8 390 aa8.28□□□□□ -1.08
BRCA1-213ENST00000476777 AK6Q9Y3D8 172 aaKnown RBP8.28□□□□□ -1.08
BRCA1-213ENST00000476777 IGHV4-4A0A075B6R2 117 aa8.27□□□□□ -1.09
BRCA1-213ENST00000476777 IGHV3OR16-8A0A075B7F1 116 aa8.27□□□□□ -1.09
BRCA1-213ENST00000476777 TMEM272A0A1B0GTI8 110 aa8.27□□□□□ -1.09
BRCA1-213ENST00000476777 IGLC7A0M8Q6 106 aa8.27□□□□□ -1.09
BRCA1-213ENST00000476777 OR2T8A6NH00 312 aa8.27□□□□□ -1.09
BRCA1-213ENST00000476777 NDUFA4O00483 81 aa8.27□□□□□ -1.09
BRCA1-213ENST00000476777 MFNGO00587 321 aa8.27□□□□□ -1.09
BRCA1-213ENST00000476777 HLA-DQB1P01920 261 aa8.27□□□□□ -1.09
BRCA1-213ENST00000476777 CD36P16671 472 aa8.27□□□□□ -1.09
BRCA1-213ENST00000476777 HLA-GP17693 338 aa8.27□□□□□ -1.09
BRCA1-213ENST00000476777 EIF4EBP1Q13541 118 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-213ENST00000476777 SSX1Q16384 188 aa8.27□□□□□ -1.09
BRCA1-213ENST00000476777 PQLC1Q8N2U9 271 aa8.27□□□□□ -1.09
BRCA1-213ENST00000476777 VN1R17PQ8TDU5 208 aa8.27□□□□□ -1.09
BRCA1-213ENST00000476777 CYGBQ8WWM9 190 aa8.27□□□□□ -1.09
BRCA1-213ENST00000476777 CENPOQ9BU64 300 aa8.27□□□□□ -1.09
BRCA1-213ENST00000476777 C20orf24Q9BUV8 137 aa8.27□□□□□ -1.09
BRCA1-213ENST00000476777 S100A14Q9HCY8 104 aa8.27□□□□□ -1.09
BRCA1-213ENST00000476777 OR2W1Q9Y3N9 320 aa8.27□□□□□ -1.09
BRCA1-213ENST00000476777 ETV7Q9Y603 341 aa8.27□□□□□ -1.09
BRCA1-213ENST00000476777 DMBT1Q9UGM3 2413 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-213ENST00000476777 IGKV1D-13A0A0B4J2D9 117 aa8.26□□□□□ -1.09
BRCA1-213ENST00000476777 K7EMT4 169 aa8.26□□□□□ -1.09
BRCA1-213ENST00000476777 ZNF207O43670 478 aaKnown RBP8.26□□□□□ -1.09
BRCA1-213ENST00000476777 CA1P00915 261 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-213ENST00000476777 IGKV1-13P0DP09 117 aa8.26□□□□□ -1.09
BRCA1-213ENST00000476777 HLA-DMBP28068 263 aa8.26□□□□□ -1.09
BRCA1-213ENST00000476777 CMC4P56277 68 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-213ENST00000476777 TMEM187Q14656 261 aa8.26□□□□□ -1.09
BRCA1-213ENST00000476777 TMEM91Q6ZNR0 172 aa8.26□□□□□ -1.09
BRCA1-213ENST00000476777 ZNF575Q86XF7 245 aa8.26□□□□□ -1.09
BRCA1-213ENST00000476777 POM121L12Q8N7R1 296 aa8.26□□□□□ -1.09
BRCA1-213ENST00000476777 Q8NAQ8 132 aa8.26□□□□□ -1.09
BRCA1-213ENST00000476777 OR10R2Q8NGX6 335 aa8.26□□□□□ -1.09
BRCA1-213ENST00000476777 TCTEX1D2Q8WW35 142 aa8.26□□□□□ -1.09
BRCA1-213ENST00000476777 TMEM203Q969S6 136 aa8.26□□□□□ -1.09
BRCA1-213ENST00000476777 BSCL2Q96G97 398 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-213ENST00000476777 RNF2Q99496 336 aa8.26□□□□□ -1.09
BRCA1-213ENST00000476777 HSD17B10Q99714 261 aaKnown RBP8.26□□□□□ -1.09
BRCA1-213ENST00000476777 CHRDL1Q9BU40 450 aa8.26□□□□□ -1.09
BRCA1-213ENST00000476777 PLCXD1Q9NUJ7 323 aa8.26□□□□□ -1.09
BRCA1-213ENST00000476777 FKBP14Q9NWM8 211 aa8.26□□□□□ -1.09
BRCA1-213ENST00000476777 BET1LQ9NYM9 111 aa8.26□□□□□ -1.09
BRCA1-213ENST00000476777 THYN1Q9P016 225 aa8.26□□□□□ -1.09
BRCA1-213ENST00000476777 RAB22AQ9UL26 194 aa8.26□□□□□ -1.09
BRCA1-213ENST00000476777 SPATA2Q9UM82 520 aa8.26□□□□□ -1.09
BRCA1-213ENST00000476777 A0A075B6Q4 140 aa8.25□□□□□ -1.09
BRCA1-213ENST00000476777 TRAV10A0A0B4J240 114 aa8.25□□□□□ -1.09
BRCA1-213ENST00000476777 M0R2N4 97 aa8.25□□□□□ -1.09
BRCA1-213ENST00000476777 SLC22A5O76082 557 aa8.25□□□□□ -1.09
BRCA1-213ENST00000476777 HRASP01112 189 aa8.25□□□□□ -1.09
BRCA1-213ENST00000476777 RBMY1A1P0DJD3 496 aaKnown RBP8.25□□□□□ -1.09
BRCA1-213ENST00000476777 RBMY1CP0DJD4 496 aa8.25□□□□□ -1.09
BRCA1-213ENST00000476777 HIST1H1DP16402 221 aaKnown RBP8.25□□□□□ -1.09
BRCA1-213ENST00000476777 NFYAP23511 347 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-213ENST00000476777 TFPI2P48307 235 aa8.25□□□□□ -1.09
BRCA1-213ENST00000476777 RBMY1FQ15415 496 aaKnown RBP8.25□□□□□ -1.09
BRCA1-213ENST00000476777 TIMM50Q3ZCQ8 353 aa8.25□□□□□ -1.09
BRCA1-213ENST00000476777 PVRIGQ6DKI7 326 aa8.25□□□□□ -1.09
BRCA1-213ENST00000476777 SPSB3Q6PJ21 355 aa8.25□□□□□ -1.09
BRCA1-213ENST00000476777 Q6ZTC4 211 aa8.25□□□□□ -1.09
BRCA1-213ENST00000476777 NR2C2APQ86WQ0 139 aa8.25□□□□□ -1.09
BRCA1-213ENST00000476777 MFSD4AQ8N468 514 aa8.25□□□□□ -1.09
BRCA1-213ENST00000476777 RNF126Q9BV68 326 aa8.25□□□□□ -1.09
BRCA1-213ENST00000476777 MND1Q9BWT6 205 aa8.25□□□□□ -1.09
BRCA1-213ENST00000476777 SMPXQ9UHP9 88 aa8.25□□□□□ -1.09
BRCA1-213ENST00000476777 LSM2Q9Y333 95 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms