RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 ZNF436Q9C0F3 470 aaPredicted RBP8.79□□□□□ -1
HDAC6-219ENST00000476625 MRPL27Q9P0M9 148 aaKnown RBP8.79□□□□□ -1
HDAC6-219ENST00000476625 TRAV25A0A0B4J276 109 aa8.78□□□□□ -1
HDAC6-219ENST00000476625 IGLC7A0M8Q6 106 aa8.78□□□□□ -1
HDAC6-219ENST00000476625 HLA-DQB1P01920 261 aa8.78□□□□□ -1
HDAC6-219ENST00000476625 HLA-GP17693 338 aa8.78□□□□□ -1
HDAC6-219ENST00000476625 TALDO1P37837 337 aa8.78□□□□□ -1
HDAC6-219ENST00000476625 MFAP2P55001 183 aa8.78□□□□□ -1
HDAC6-219ENST00000476625 OR2B8PP59922 312 aa8.78□□□□□ -1
HDAC6-219ENST00000476625 KLK9Q2XQG4 91 aa8.78□□□□□ -1
HDAC6-219ENST00000476625 TIMM50Q3ZCQ8 353 aa8.78□□□□□ -1
HDAC6-219ENST00000476625 ZNF773Q6PK81 442 aa8.78□□□□□ -1
HDAC6-219ENST00000476625 PLET1Q6UQ28 207 aa8.78□□□□□ -1
HDAC6-219ENST00000476625 SLC38A6Q8IZM9 456 aa8.78□□□□□ -1
HDAC6-219ENST00000476625 MFSD4AQ8N468 514 aa8.78□□□□□ -1
HDAC6-219ENST00000476625 PACRGLQ8N7B6 248 aa8.78□□□□□ -1
HDAC6-219ENST00000476625 OR4S2Q8NH73 311 aa8.78□□□□□ -1
HDAC6-219ENST00000476625 SPAG8Q99932 426 aaPredicted RBP8.78□□□□□ -1
HDAC6-219ENST00000476625 C20orf24Q9BUV8 137 aa8.78□□□□□ -1
HDAC6-219ENST00000476625 C5orf66Q9H5L9 145 aa8.78□□□□□ -1
HDAC6-219ENST00000476625 CCL28Q9NRJ3 127 aa8.78□□□□□ -1
HDAC6-219ENST00000476625 KLK9Q9UKQ9 250 aa8.78□□□□□ -1
HDAC6-219ENST00000476625 MRPS7Q9Y2R9 242 aaKnown RBP8.78□□□□□ -1
HDAC6-219ENST00000476625 PRELID3BQ9Y3B1 194 aa8.78□□□□□ -1
HDAC6-219ENST00000476625 OR2W1Q9Y3N9 320 aa8.78□□□□□ -1
HDAC6-219ENST00000476625 DNAH17Q9UFH2 4485 aa8.78□□□□□ -1
HDAC6-219ENST00000476625 ABCA13Q86UQ4 5058 aa8.77□□□□□ -1.01
HDAC6-219ENST00000476625 DYNC1H1Q14204 4646 aaKnown RBP8.77□□□□□ -1.01
HDAC6-219ENST00000476625 IGHV3OR16-13A0A075B7E8 117 aa8.77□□□□□ -1.01
HDAC6-219ENST00000476625 TRBV7-1A0A0A6YYK4 115 aa8.77□□□□□ -1.01
HDAC6-219ENST00000476625 IGHV3-74A0A0B4J1X5 117 aa8.77□□□□□ -1.01
HDAC6-219ENST00000476625 TMEM235A6NFC5 223 aa8.77□□□□□ -1.01
HDAC6-219ENST00000476625 F8W735 103 aaPredicted RBP8.77□□□□□ -1.01
HDAC6-219ENST00000476625 TSPAN4O14817 238 aa8.77□□□□□ -1.01
HDAC6-219ENST00000476625 TGOLN2O43493 480 aa8.77□□□□□ -1.01
HDAC6-219ENST00000476625 XRCC3O43542 346 aa8.77□□□□□ -1.01
HDAC6-219ENST00000476625 SSX5O60225 188 aa8.77□□□□□ -1.01
HDAC6-219ENST00000476625 ARL6IP5O75915 188 aa8.77□□□□□ -1.01
HDAC6-219ENST00000476625 CD36P16671 472 aa8.77□□□□□ -1.01
HDAC6-219ENST00000476625 GADD45AP24522 165 aa8.77□□□□□ -1.01
HDAC6-219ENST00000476625 RPL8P62917 257 aaKnown RBP8.77□□□□□ -1.01
HDAC6-219ENST00000476625 SSX1Q16384 188 aa8.77□□□□□ -1.01
HDAC6-219ENST00000476625 OGFRL1Q5TC84 451 aaPredicted RBP8.77□□□□□ -1.01
HDAC6-219ENST00000476625 KRTAP4-5Q9BYR2 181 aa8.77□□□□□ -1.01
HDAC6-219ENST00000476625 ATG5Q9H1Y0 275 aa8.77□□□□□ -1.01
HDAC6-219ENST00000476625 HRASLSQ9HDD0 168 aa8.77□□□□□ -1.01
HDAC6-219ENST00000476625 UFC1Q9Y3C8 167 aa8.77□□□□□ -1.01
HDAC6-219ENST00000476625 RYR1P21817 5038 aa8.76□□□□□ -1.01
HDAC6-219ENST00000476625 KIR2DL5BA0A0G2JN68 375 aa8.76□□□□□ -1.01
HDAC6-219ENST00000476625 KIR2DL5BA0A0G2JPC4 375 aa8.76□□□□□ -1.01
HDAC6-219ENST00000476625 A0A1B0GVY2 172 aa8.76□□□□□ -1.01
HDAC6-219ENST00000476625 UBE2CO00762 179 aa8.76□□□□□ -1.01
HDAC6-219ENST00000476625 DIRAS3O95661 229 aa8.76□□□□□ -1.01
HDAC6-219ENST00000476625 ADMP35318 185 aa8.76□□□□□ -1.01
HDAC6-219ENST00000476625 RBMS2Q15434 407 aaKnown RBP8.76□□□□□ -1.01
HDAC6-219ENST00000476625 CDNFQ49AH0 187 aa8.76□□□□□ -1.01
HDAC6-219ENST00000476625 Q6ZS49 121 aa8.76□□□□□ -1.01
HDAC6-219ENST00000476625 KIR2DL5AQ8N109 375 aa8.76□□□□□ -1.01
HDAC6-219ENST00000476625 GBGT1Q8N5D6 347 aa8.76□□□□□ -1.01
HDAC6-219ENST00000476625 OR11H2Q8NH07 326 aa8.76□□□□□ -1.01
HDAC6-219ENST00000476625 KIR2DL5BQ8NHK3 375 aa8.76□□□□□ -1.01
HDAC6-219ENST00000476625 C11orf45Q8TAV5 145 aa8.76□□□□□ -1.01
HDAC6-219ENST00000476625 SECTM1Q8WVN6 248 aa8.76□□□□□ -1.01
HDAC6-219ENST00000476625 MARC2Q969Z3 335 aa8.76□□□□□ -1.01
HDAC6-219ENST00000476625 RNF2Q99496 336 aa8.76□□□□□ -1.01
HDAC6-219ENST00000476625 RARRES2Q99969 163 aa8.76□□□□□ -1.01
HDAC6-219ENST00000476625 APLNQ9ULZ1 77 aa8.76□□□□□ -1.01
HDAC6-219ENST00000476625 IFITM5A6NNB3 132 aa8.75□□□□□ -1.01
HDAC6-219ENST00000476625 IGLL5B9A064 214 aa8.75□□□□□ -1.01
HDAC6-219ENST00000476625 SULT1C2O00338 296 aa8.75□□□□□ -1.01
HDAC6-219ENST00000476625 HIST1H1BP16401 226 aaKnown RBP8.75□□□□□ -1.01
HDAC6-219ENST00000476625 ATF4P18848 351 aaPredicted RBP8.75□□□□□ -1.01
HDAC6-219ENST00000476625 MAS1LP35410 378 aa8.75□□□□□ -1.01
HDAC6-219ENST00000476625 WT1-ASQ06250 92 aa8.75□□□□□ -1.01
HDAC6-219ENST00000476625 MLLT11Q13015 90 aaPredicted RBP8.75□□□□□ -1.01
HDAC6-219ENST00000476625 SPAG16Q8N0X2 631 aa8.75□□□□□ -1.01
HDAC6-219ENST00000476625 UBAC2Q8NBM4 344 aa8.75□□□□□ -1.01
HDAC6-219ENST00000476625 VSTM2AQ8TAG5 236 aa8.75□□□□□ -1.01
HDAC6-219ENST00000476625 GALNT14Q96FL9 552 aa8.75□□□□□ -1.01
HDAC6-219ENST00000476625 CXorf58Q96LI9 332 aa8.75□□□□□ -1.01
HDAC6-219ENST00000476625 CCDC90BQ9GZT6 254 aa8.75□□□□□ -1.01
HDAC6-219ENST00000476625 C8orf4Q9NR00 106 aa8.75□□□□□ -1.01
HDAC6-219ENST00000476625 PKD1P98161 4303 aa8.74□□□□□ -1.01
HDAC6-219ENST00000476625 UPK2O00526 184 aa8.74□□□□□ -1.01
HDAC6-219ENST00000476625 DHFRP00374 187 aa8.74□□□□□ -1.01
HDAC6-219ENST00000476625 RAB6AP20340 208 aa8.74□□□□□ -1.01
HDAC6-219ENST00000476625 GALP22466 123 aa8.74□□□□□ -1.01
HDAC6-219ENST00000476625 PTBP1P26599 531 aaKnown RBP eCLIP8.74□□□□□ -1.01
HDAC6-219ENST00000476625 ELLP55199 621 aaPredicted RBP8.74□□□□□ -1.01
HDAC6-219ENST00000476625 SLC25A24Q6NUK1 477 aa8.74□□□□□ -1.01
HDAC6-219ENST00000476625 FAM24BQ8N5W8 94 aa8.74□□□□□ -1.01
HDAC6-219ENST00000476625 TMEM217Q8N7C4 229 aa8.74□□□□□ -1.01
HDAC6-219ENST00000476625 GVQW1Q8N7I0 195 aa8.74□□□□□ -1.01
HDAC6-219ENST00000476625 MGLLQ99685 303 aa8.74□□□□□ -1.01
HDAC6-219ENST00000476625 HSD17B10Q99714 261 aaKnown RBP8.74□□□□□ -1.01
HDAC6-219ENST00000476625 SCRT1Q9BWW7 348 aa8.74□□□□□ -1.01
HDAC6-219ENST00000476625 CSTL1Q9H114 145 aa8.74□□□□□ -1.01
HDAC6-219ENST00000476625 DAZ1Q9NQZ3 744 aaKnown RBP8.74□□□□□ -1.01
HDAC6-219ENST00000476625 BET1LQ9NYM9 111 aa8.74□□□□□ -1.01
HDAC6-219ENST00000476625 NSG2Q9Y328 171 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms