RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 Q6P435 159 aa7□□□□□ -1.29
VAPB-205ENST00000476395 OR1L1Q8NH94 360 aa7□□□□□ -1.29
VAPB-205ENST00000476395 TAF15Q92804 592 aaKnown RBP eCLIP7□□□□□ -1.29
VAPB-205ENST00000476395 NEUROG1Q92886 237 aa7□□□□□ -1.29
VAPB-205ENST00000476395 SPIN2AQ99865 258 aa7□□□□□ -1.29
VAPB-205ENST00000476395 SPIN2BQ9BPZ2 258 aa7□□□□□ -1.29
VAPB-205ENST00000476395 CST9LQ9H4G1 147 aa7□□□□□ -1.29
VAPB-205ENST00000476395 TRAV38-1A0A0B4J264 116 aa7□□□□□ -1.29
VAPB-205ENST00000476395 MLNRO43193 412 aa7□□□□□ -1.29
VAPB-205ENST00000476395 WISP2O76076 250 aa7□□□□□ -1.29
VAPB-205ENST00000476395 CLDN14O95500 239 aa7□□□□□ -1.29
VAPB-205ENST00000476395 IFNA1P01562 189 aa7□□□□□ -1.29
VAPB-205ENST00000476395 GUCA1AP43080 201 aaPredicted RBP7□□□□□ -1.29
VAPB-205ENST00000476395 PSG7Q13046 419 aa7□□□□□ -1.29
VAPB-205ENST00000476395 TMEM249Q2WGJ8 235 aa7□□□□□ -1.29
VAPB-205ENST00000476395 FAM58AQ8N1B3 248 aa7□□□□□ -1.29
VAPB-205ENST00000476395 ZNF738Q8NE65 137 aa7□□□□□ -1.29
VAPB-205ENST00000476395 RNF125Q96EQ8 232 aa7□□□□□ -1.29
VAPB-205ENST00000476395 GP6Q9HCN6 339 aa7□□□□□ -1.29
VAPB-205ENST00000476395 NRN1Q9NPD7 142 aa7□□□□□ -1.29
VAPB-205ENST00000476395 PRRC2CQ9Y520 2896 aaKnown RBP7□□□□□ -1.29
VAPB-205ENST00000476395 A0A096LPE4 126 aa7□□□□□ -1.29
VAPB-205ENST00000476395 A0A1W2PNU3 283 aaPredicted RBP7□□□□□ -1.29
VAPB-205ENST00000476395 A0A1W2PPZ6 126 aa7□□□□□ -1.29
VAPB-205ENST00000476395 OR2T8A6NH00 312 aa7□□□□□ -1.29
VAPB-205ENST00000476395 K7EQM0 130 aa7□□□□□ -1.29
VAPB-205ENST00000476395 K7ERU9 68 aa7□□□□□ -1.29
VAPB-205ENST00000476395 P0C879 139 aa7□□□□□ -1.29
VAPB-205ENST00000476395 F2RP25116 425 aa7□□□□□ -1.29
VAPB-205ENST00000476395 CLDN18P56856 261 aa7□□□□□ -1.29
VAPB-205ENST00000476395 OCIAD2Q56VL3 154 aa7□□□□□ -1.29
VAPB-205ENST00000476395 MRPL52Q86TS9 123 aaKnown RBP7□□□□□ -1.29
VAPB-205ENST00000476395 C1orf210Q8IVY1 113 aa7□□□□□ -1.29
VAPB-205ENST00000476395 TMEM105Q8N8V8 129 aa7□□□□□ -1.29
VAPB-205ENST00000476395 C1orf162Q8NEQ5 155 aaPredicted RBP7□□□□□ -1.29
VAPB-205ENST00000476395 GLMPQ8WWB7 406 aa7□□□□□ -1.29
VAPB-205ENST00000476395 POM121L2Q96KW2 1035 aa7□□□□□ -1.29
VAPB-205ENST00000476395 UQCR10Q9UDW1 63 aa7□□□□□ -1.29
VAPB-205ENST00000476395 CNOT1A5YKK6 2376 aaKnown RBP6.99□□□□□ -1.29
VAPB-205ENST00000476395 FCN1O00602 326 aa6.99□□□□□ -1.29
VAPB-205ENST00000476395 SIVA1O15304 175 aa6.99□□□□□ -1.29
VAPB-205ENST00000476395 RAMP3O60896 148 aa6.99□□□□□ -1.29
VAPB-205ENST00000476395 C3orf79P0CE67 100 aa6.99□□□□□ -1.29
VAPB-205ENST00000476395 NTF3P20783 257 aa6.99□□□□□ -1.29
VAPB-205ENST00000476395 SRPXP78539 464 aa6.99□□□□□ -1.29
VAPB-205ENST00000476395 NRN1LQ496H8 165 aa6.99□□□□□ -1.29
VAPB-205ENST00000476395 Q8N7P7 452 aa6.99□□□□□ -1.29
VAPB-205ENST00000476395 SIGLECL1Q8N7X8 197 aa6.99□□□□□ -1.29
VAPB-205ENST00000476395 OR10G9Q8NGN4 311 aa6.99□□□□□ -1.29
VAPB-205ENST00000476395 OR10G7Q8NGN6 311 aa6.99□□□□□ -1.29
VAPB-205ENST00000476395 SFRP2Q96HF1 295 aa6.99□□□□□ -1.29
VAPB-205ENST00000476395 EAF1Q96JC9 268 aaPredicted RBP6.99□□□□□ -1.29
VAPB-205ENST00000476395 HES7Q9BYE0 225 aa6.99□□□□□ -1.29
VAPB-205ENST00000476395 TNFRSF18Q9Y5U5 241 aa6.99□□□□□ -1.29
VAPB-205ENST00000476395 R4GN57 208 aa6.99□□□□□ -1.29
VAPB-205ENST00000476395 TMEM250H0YL14 139 aa6.99□□□□□ -1.29
VAPB-205ENST00000476395 NEURL1O76050 574 aa6.99□□□□□ -1.29
VAPB-205ENST00000476395 GPX1P07203 203 aa6.99□□□□□ -1.29
VAPB-205ENST00000476395 LCN2P80188 198 aa6.99□□□□□ -1.29
VAPB-205ENST00000476395 RBPJQ06330 500 aa6.99□□□□□ -1.29
VAPB-205ENST00000476395 NEIL1Q96FI4 390 aaPredicted RBP6.99□□□□□ -1.29
VAPB-205ENST00000476395 SPRY4Q9C004 299 aa6.99□□□□□ -1.29
VAPB-205ENST00000476395 USF3Q68DE3 2245 aa6.99□□□□□ -1.29
VAPB-205ENST00000476395 PMS2P5A8MQ11 134 aa6.99□□□□□ -1.29
VAPB-205ENST00000476395 ZNF891A8MT65 544 aaPredicted RBP6.99□□□□□ -1.29
VAPB-205ENST00000476395 SNURFLB1AK76 121 aa6.99□□□□□ -1.29
VAPB-205ENST00000476395 SYNGR2O43760 224 aa6.99□□□□□ -1.29
VAPB-205ENST00000476395 RANP62826 216 aaKnown RBP6.99□□□□□ -1.29
VAPB-205ENST00000476395 C9orf135Q5VTT2 229 aa6.99□□□□□ -1.29
VAPB-205ENST00000476395 PEAR1Q5VY43 1037 aaPredicted RBP6.99□□□□□ -1.29
VAPB-205ENST00000476395 OR4B1Q8NGF8 309 aa6.99□□□□□ -1.29
VAPB-205ENST00000476395 BCL2L2Q92843 193 aaPredicted RBP6.99□□□□□ -1.29
VAPB-205ENST00000476395 GJE1A6NN92 205 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 NPIPB11E5RHQ5 1161 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 SNAI2O43623 268 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 CFIP05156 583 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 SLC25A6P12236 298 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 ZNF83P51522 516 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 TCL1AP56279 114 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 ZNF90Q03938 601 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 SLC38A11Q08AI6 406 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 FOXE3Q13461 319 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 SPINK14Q6IE38 97 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 SPATA12Q7Z6I5 190 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 SARAFQ96BY9 339 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 CLN8Q9UBY8 286 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 FAM186AA6NE01 2351 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 TRBV7-9A0A0J9YWB2 115 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 SCO2A0A1W2PP80 73 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 K7EN84 100 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 BRI3O95415 125 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 OCC1Q8TAD7 63 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 IL1F10Q8WWZ1 152 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 LINC00470Q9BZP3 86 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 A0A1W2PS18 150 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 C5orf49A4QMS7 147 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 CELA3BP08861 270 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 PAFAH1B2P68402 229 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 KIR3DL3Q8N743 410 aa6.98□□□□□ -1.29
VAPB-205ENST00000476395 OR4F17Q8NGA8 305 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms