RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 TGFBR2P37173 567 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 MAGEA12P43365 314 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 SERPINB9P50453 376 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 CDK9P50750 372 aaKnown RBP2.18□□□□□ -2.06
PTCD3-211ENST00000476215 EBPQ15125 230 aaKnown RBP2.18□□□□□ -2.06
PTCD3-211ENST00000476215 UAP1Q16222 522 aaPredicted RBP2.18□□□□□ -2.06
PTCD3-211ENST00000476215 UBE2NLQ5JXB2 153 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 C6orf183Q5T699 404 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 SLC48A1Q6P1K1 146 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 RPS27LQ71UM5 84 aaKnown RBP2.18□□□□□ -2.06
PTCD3-211ENST00000476215 MMGT1Q8N4V1 131 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 OR13C9Q8NGT0 318 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 OR6N2Q8NGY6 317 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 MUC7Q8TAX7 377 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 IFT81Q8WYA0 676 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 RNASE6Q93091 150 aaKnown RBP2.18□□□□□ -2.06
PTCD3-211ENST00000476215 ADTRPQ96IZ2 230 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 ZNF75AQ96N20 296 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 YPEL4Q96NS1 127 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 MRPL57Q9BQC6 102 aaKnown RBP2.18□□□□□ -2.06
PTCD3-211ENST00000476215 DOHHQ9BU89 302 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 VPS29Q9UBQ0 182 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 PCTPQ9UKL6 214 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 BOKQ9UMX3 212 aaPredicted RBP2.18□□□□□ -2.06
PTCD3-211ENST00000476215 C15orf41Q9Y2V0 281 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 MXRA5Q9NR99 2828 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 CSPG4Q6UVK1 2322 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 EML6Q6ZMW3 1958 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 MED12Q93074 2177 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 STAB1Q9NY15 2570 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 NBEAL1Q6ZS30 2694 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 FREM3P0C091 2139 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 GOLGA6L10A6NI86 522 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 ZNF729A6NN14 1252 aaPredicted RBP2.17□□□□□ -2.06
PTCD3-211ENST00000476215 LEUTXA8MZ59 168 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 ZNF878C9JN71 531 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 J3QRE1 110 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 UPK2O00526 184 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 ACOX3O15254 700 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 FADS1O60427 444 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 UGT2B11O75310 529 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 RPS17P08708 135 aaKnown RBP2.17□□□□□ -2.06
PTCD3-211ENST00000476215 CD99P14209 185 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 OPRM1P35372 400 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 SLCO1A2P46721 670 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 GZMMP51124 257 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 C2orf80Q0P641 193 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 BCL2A1Q16548 175 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 WHAMMP3Q1A5X7 153 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 KRTAP6-3Q3LI67 103 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 TRMT12Q53H54 448 aaKnown RBP2.17□□□□□ -2.06
PTCD3-211ENST00000476215 COMMD6Q7Z4G1 85 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 CYP4Z1Q86W10 505 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 PLCZ1Q86YW0 608 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 EIF4E3Q8N5X7 224 aaKnown RBP2.17□□□□□ -2.06
PTCD3-211ENST00000476215 ASCC1Q8N9N2 400 aaKnown RBP2.17□□□□□ -2.06
PTCD3-211ENST00000476215 MNS1Q8NEH6 495 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 C16orf78Q8WTQ4 265 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 TMBIM1Q969X1 311 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 UGT2B28Q9BY64 529 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 TXNIPQ9H3M7 391 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 VCX3AQ9NNX9 186 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 ACOT13Q9NPJ3 140 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 SDHAF2Q9NX18 166 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 TAS2R7Q9NYW3 318 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 MAT2BQ9NZL9 334 aa2.17□□□□□ -2.06
PTCD3-211ENST00000476215 FBN1P35555 2871 aaKnown RBP2.17□□□□□ -2.06
PTCD3-211ENST00000476215 IGHV3-21A0A0B4J1V1 117 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 A0A0B4J2C4 111 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 EXOC1LA0A1B0GW35 172 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 GNG14A0A1W2PPG7 69 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 A8MT66 165 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 GGTLC3B5MD39 225 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 UBFD1O14562 309 aaKnown RBP2.16□□□□□ -2.06
PTCD3-211ENST00000476215 ENSAO43768 121 aaKnown RBP2.16□□□□□ -2.06
PTCD3-211ENST00000476215 CRHP06850 196 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 IL3P08700 152 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 ZNF708P17019 499 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 DNAJB13P59910 316 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 PSPHP78330 225 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 PLCXD2Q0VAA5 305 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 GPR176Q14439 515 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 KRTAP21-3Q3LHN1 58 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 SPIN4Q56A73 249 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 CLEC12AQ5QGZ9 265 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 NOXRED1Q6NXP6 359 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 C8orf74Q6P047 294 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 SCIMPQ6UWF3 145 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 COMTD1Q86VU5 262 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 IFT20Q8IY31 132 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 ZFP82Q8N141 532 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 GAPTQ8N292 157 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 OR52R1Q8NGF1 315 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 ZNF675Q8TD23 568 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 TAS2R9Q9NYW1 312 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 MED11Q9P086 117 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 TMEM216Q9P0N5 145 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 ZNF337Q9Y3M9 751 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 TIMM22Q9Y584 194 aa2.16□□□□□ -2.06
PTCD3-211ENST00000476215 NCKAP5O14513 1909 aa2.15□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms