RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 HAND1O96004 215 aa5.66□□□□□ -1.5
UBR4-212ENST00000475973 IGLV1-44P01699 117 aa5.66□□□□□ -1.5
UBR4-212ENST00000475973 HBZP02008 142 aa5.66□□□□□ -1.5
UBR4-212ENST00000475973 ADH4P08319 380 aa5.66□□□□□ -1.5
UBR4-212ENST00000475973 OR10J4P0C629 311 aa5.66□□□□□ -1.5
UBR4-212ENST00000475973 IL3RAP26951 378 aa5.66□□□□□ -1.5
UBR4-212ENST00000475973 DUTP33316 252 aaKnown RBP5.66□□□□□ -1.5
UBR4-212ENST00000475973 LINC00310P59036 64 aa5.66□□□□□ -1.5
UBR4-212ENST00000475973 UBE2NP61088 152 aaKnown RBP5.66□□□□□ -1.5
UBR4-212ENST00000475973 FOXF2Q12947 444 aa5.66□□□□□ -1.5
UBR4-212ENST00000475973 PSG7Q13046 419 aa5.66□□□□□ -1.5
UBR4-212ENST00000475973 CATR1Q13166 79 aa5.66□□□□□ -1.5
UBR4-212ENST00000475973 SLC10A1Q14973 349 aa5.66□□□□□ -1.5
UBR4-212ENST00000475973 ZNF718Q3SXZ3 478 aa5.66□□□□□ -1.5
UBR4-212ENST00000475973 C1orf194Q5T5A4 169 aa5.66□□□□□ -1.5
UBR4-212ENST00000475973 ACP7Q6ZNF0 438 aa5.66□□□□□ -1.5
UBR4-212ENST00000475973 Q6ZR03 302 aa5.66□□□□□ -1.5
UBR4-212ENST00000475973 MYPOPQ86VE0 399 aaPredicted RBP5.66□□□□□ -1.5
UBR4-212ENST00000475973 C1orf174Q8IYL3 243 aa5.66□□□□□ -1.5
UBR4-212ENST00000475973 PNKDQ8N490 385 aa5.66□□□□□ -1.5
UBR4-212ENST00000475973 NAXEQ8NCW5 288 aa5.66□□□□□ -1.5
UBR4-212ENST00000475973 C1orf162Q8NEQ5 155 aaPredicted RBP5.66□□□□□ -1.5
UBR4-212ENST00000475973 OR10P1Q8NGE3 313 aa5.66□□□□□ -1.5
UBR4-212ENST00000475973 OR10G8Q8NGN5 311 aa5.66□□□□□ -1.5
UBR4-212ENST00000475973 SNX22Q96L94 193 aa5.66□□□□□ -1.5
UBR4-212ENST00000475973 HSD17B10Q99714 261 aaKnown RBP5.66□□□□□ -1.5
UBR4-212ENST00000475973 PCGF1Q9BSM1 259 aa5.66□□□□□ -1.5
UBR4-212ENST00000475973 ELOVL1Q9BW60 279 aa5.66□□□□□ -1.5
UBR4-212ENST00000475973 LINC00574Q9H8X3 128 aa5.66□□□□□ -1.5
UBR4-212ENST00000475973 ELOVL5Q9NYP7 299 aa5.66□□□□□ -1.5
UBR4-212ENST00000475973 CLCF1Q9UBD9 225 aa5.66□□□□□ -1.5
UBR4-212ENST00000475973 TRAPPC2LQ9UL33 140 aa5.66□□□□□ -1.5
UBR4-212ENST00000475973 TP53TG3Q9ULZ0 132 aa5.66□□□□□ -1.5
UBR4-212ENST00000475973 SPTBN1Q01082 2364 aaKnown RBP5.65□□□□□ -1.5
UBR4-212ENST00000475973 GTF3C1Q12789 2109 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 NOTCH2Q04721 2471 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 UBE2L5PA0A1B0GUS4 154 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 C9JCJ5 164 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 C19orf84I3L1E1 186 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 HSPB6O14558 160 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 ZNHIT1O43257 154 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 NXPH3O95157 252 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 SELLP14151 372 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 SPCS3P61009 180 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 PPP1CBP62140 327 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 TFF3Q07654 80 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 Q0VG73 95 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 P2RY6Q15077 328 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 TBC1D28Q2M2D7 210 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 ALKBH6Q3KRA9 238 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 FFAR4Q5NUL3 377 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 SPATA46Q5T0L3 261 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 C1orf185Q5T7R7 199 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 SLC25A24Q6NUK1 477 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 BTNL3Q6UXE8 466 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 WDR82Q6UXN9 313 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 SSX9Q7RTT3 188 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 Q8TCH9 128 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 NEK7Q8TDX7 302 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 GATAD1Q8WUU5 269 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 TMEM18Q96B42 140 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 GALMQ96C23 342 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 MISP3Q96FF7 219 aa5.65□□□□□ -1.5
UBR4-212ENST00000475973 TEX15Q9BXT5 2789 aa5.65□□□□□ -1.51
UBR4-212ENST00000475973 POLEQ07864 2286 aa5.64□□□□□ -1.51
UBR4-212ENST00000475973 ICE1Q9Y2F5 2266 aa5.64□□□□□ -1.51
UBR4-212ENST00000475973 PRRC2CQ9Y520 2896 aaKnown RBP5.64□□□□□ -1.51
UBR4-212ENST00000475973 RP1L1Q8IWN7 2480 aaPredicted RBP5.64□□□□□ -1.51
UBR4-212ENST00000475973 SAA2-SAA4A0A096LPE2 208 aa5.64□□□□□ -1.51
UBR4-212ENST00000475973 TRAV39A0A0B4J263 110 aa5.64□□□□□ -1.51
UBR4-212ENST00000475973 XKRY2A2RUG3 117 aa5.64□□□□□ -1.51
UBR4-212ENST00000475973 C11orf94C9JXX5 98 aa5.64□□□□□ -1.51
UBR4-212ENST00000475973 C17orf112F2Z3M2 114 aa5.64□□□□□ -1.51
UBR4-212ENST00000475973 INS-IGF2F8WCM5 200 aa5.64□□□□□ -1.51
UBR4-212ENST00000475973 SIRPB1O00241 398 aa5.64□□□□□ -1.51
UBR4-212ENST00000475973 PAGE4O60829 102 aa5.64□□□□□ -1.51
UBR4-212ENST00000475973 HPRT1P00492 218 aa5.64□□□□□ -1.51
UBR4-212ENST00000475973 REG1AP05451 166 aa5.64□□□□□ -1.51
UBR4-212ENST00000475973 IGFBP2P18065 325 aa5.64□□□□□ -1.51
UBR4-212ENST00000475973 RAB4AP20338 218 aa5.64□□□□□ -1.51
UBR4-212ENST00000475973 IGHV1-2P23083 117 aa5.64□□□□□ -1.51
UBR4-212ENST00000475973 G6PCP35575 357 aa5.64□□□□□ -1.51
UBR4-212ENST00000475973 RPL29P47914 159 aaKnown RBP5.64□□□□□ -1.51
UBR4-212ENST00000475973 CDC34P49427 236 aaPredicted RBP5.64□□□□□ -1.51
UBR4-212ENST00000475973 CNN1P51911 297 aaKnown RBP5.64□□□□□ -1.51
UBR4-212ENST00000475973 CEBPGP53567 150 aa5.64□□□□□ -1.51
UBR4-212ENST00000475973 ATP5IP56385 69 aaPredicted RBP5.64□□□□□ -1.51
UBR4-212ENST00000475973 LOXL3P58215 753 aa5.64□□□□□ -1.51
UBR4-212ENST00000475973 ERVFC1-1P60608 527 aa5.64□□□□□ -1.51
UBR4-212ENST00000475973 NUTF2P61970 127 aaKnown RBP5.64□□□□□ -1.51
UBR4-212ENST00000475973 CDSNQ15517 529 aa5.64□□□□□ -1.51
UBR4-212ENST00000475973 ADIRFQ15847 76 aa5.64□□□□□ -1.51
UBR4-212ENST00000475973 Q3ZCU0 254 aa5.64□□□□□ -1.51
UBR4-212ENST00000475973 KIAA2026Q5HYC2 2103 aa5.64□□□□□ -1.51
UBR4-212ENST00000475973 MBNL2Q5VZF2 373 aaKnown RBP5.64□□□□□ -1.51
UBR4-212ENST00000475973 TEX43Q6ZNM6 134 aa5.64□□□□□ -1.51
UBR4-212ENST00000475973 RPRMLQ8N4K4 120 aa5.64□□□□□ -1.51
UBR4-212ENST00000475973 OR52L2PQ8NGH6 319 aa5.64□□□□□ -1.51
UBR4-212ENST00000475973 SLC25A40Q8TBP6 338 aa5.64□□□□□ -1.51
UBR4-212ENST00000475973 KLF14Q8TD94 323 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms