RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 A0A0J9YWU9 116 aa8.08□□□□□ -1.12
CDRT1-205ENST00000475944 TMEM235A6NFC5 223 aa8.08□□□□□ -1.12
CDRT1-205ENST00000475944 REG1AP05451 166 aa8.08□□□□□ -1.12
CDRT1-205ENST00000475944 C8orf88P0DMB2 117 aa8.08□□□□□ -1.12
CDRT1-205ENST00000475944 MYOD1P15172 320 aa8.08□□□□□ -1.12
CDRT1-205ENST00000475944 GPR183P32249 361 aa8.08□□□□□ -1.12
CDRT1-205ENST00000475944 BMI1P35226 326 aa8.08□□□□□ -1.12
CDRT1-205ENST00000475944 BRWD1-AS2P59051 145 aa8.08□□□□□ -1.12
CDRT1-205ENST00000475944 TNFRSF9Q07011 255 aa8.08□□□□□ -1.12
CDRT1-205ENST00000475944 TIMM50Q3ZCQ8 353 aa8.08□□□□□ -1.12
CDRT1-205ENST00000475944 ZNF585BQ52M93 769 aa8.08□□□□□ -1.12
CDRT1-205ENST00000475944 C22orf42Q6IC83 251 aa8.08□□□□□ -1.12
CDRT1-205ENST00000475944 PLET1Q6UQ28 207 aa8.08□□□□□ -1.12
CDRT1-205ENST00000475944 UNQ9165/PRO28630Q6UXU0 137 aa8.08□□□□□ -1.12
CDRT1-205ENST00000475944 Q6ZWC4 215 aa8.08□□□□□ -1.12
CDRT1-205ENST00000475944 OR2C3Q8N628 320 aa8.08□□□□□ -1.12
CDRT1-205ENST00000475944 HRASLSQ9HDD0 168 aa8.08□□□□□ -1.12
CDRT1-205ENST00000475944 BLOC1S6Q9UL45 172 aa8.08□□□□□ -1.12
CDRT1-205ENST00000475944 NOTOA8MTQ0 251 aa8.07□□□□□ -1.12
CDRT1-205ENST00000475944 UBE2CO00762 179 aa8.07□□□□□ -1.12
CDRT1-205ENST00000475944 CYB5BO43169 146 aa8.07□□□□□ -1.12
CDRT1-205ENST00000475944 SPRY2O43597 315 aa8.07□□□□□ -1.12
CDRT1-205ENST00000475944 ATF4P18848 351 aaPredicted RBP8.07□□□□□ -1.12
CDRT1-205ENST00000475944 ARPC4P59998 168 aa8.07□□□□□ -1.12
CDRT1-205ENST00000475944 MSMO1Q15800 293 aa8.07□□□□□ -1.12
CDRT1-205ENST00000475944 CEMP1Q6PRD7 247 aaPredicted RBP8.07□□□□□ -1.12
CDRT1-205ENST00000475944 LYG2Q86SG7 212 aa8.07□□□□□ -1.12
CDRT1-205ENST00000475944 NR2C2APQ86WQ0 139 aa8.07□□□□□ -1.12
CDRT1-205ENST00000475944 SPAG16Q8N0X2 631 aa8.07□□□□□ -1.12
CDRT1-205ENST00000475944 ZBTB34Q8NCN2 500 aa8.07□□□□□ -1.12
CDRT1-205ENST00000475944 ZNF502Q8TBZ5 544 aa8.07□□□□□ -1.12
CDRT1-205ENST00000475944 SECTM1Q8WVN6 248 aa8.07□□□□□ -1.12
CDRT1-205ENST00000475944 SPAG8Q99932 426 aaPredicted RBP8.07□□□□□ -1.12
CDRT1-205ENST00000475944 SRSF8Q9BRL6 282 aaKnown RBP8.07□□□□□ -1.12
CDRT1-205ENST00000475944 C5orf66Q9H5L9 145 aa8.07□□□□□ -1.12
CDRT1-205ENST00000475944 KLK5Q9Y337 293 aaPredicted RBP8.07□□□□□ -1.12
CDRT1-205ENST00000475944 KIR2DL5BA0A0G2JN68 375 aa8.06□□□□□ -1.12
CDRT1-205ENST00000475944 KIR2DL5BA0A0G2JPC4 375 aa8.06□□□□□ -1.12
CDRT1-205ENST00000475944 IGLC7A0M8Q6 106 aa8.06□□□□□ -1.12
CDRT1-205ENST00000475944 SMIM30A4D0T7 59 aa8.06□□□□□ -1.12
CDRT1-205ENST00000475944 CGB1A6NKQ9 187 aa8.06□□□□□ -1.12
CDRT1-205ENST00000475944 TSPAN4O14817 238 aa8.06□□□□□ -1.12
CDRT1-205ENST00000475944 RBFOX2O43251 390 aaKnown RBP eCLIP8.06□□□□□ -1.12
CDRT1-205ENST00000475944 TNFSF12O43508 249 aa8.06□□□□□ -1.12
CDRT1-205ENST00000475944 SSX5O60225 188 aa8.06□□□□□ -1.12
CDRT1-205ENST00000475944 FGF2P09038 288 aa8.06□□□□□ -1.12
CDRT1-205ENST00000475944 PTBP1P26599 531 aaKnown RBP eCLIP8.06□□□□□ -1.12
CDRT1-205ENST00000475944 TAS2R31P59538 309 aa8.06□□□□□ -1.12
CDRT1-205ENST00000475944 OR2B8PP59922 312 aa8.06□□□□□ -1.12
CDRT1-205ENST00000475944 CATR1Q13166 79 aa8.06□□□□□ -1.12
CDRT1-205ENST00000475944 DEFB135Q30KP9 77 aa8.06□□□□□ -1.12
CDRT1-205ENST00000475944 THOC7Q6I9Y2 204 aaKnown RBP8.06□□□□□ -1.12
CDRT1-205ENST00000475944 LAMTOR1Q6IAA8 161 aa8.06□□□□□ -1.12
CDRT1-205ENST00000475944 KIR2DL5AQ8N109 375 aa8.06□□□□□ -1.12
CDRT1-205ENST00000475944 TMEM217Q8N7C4 229 aa8.06□□□□□ -1.12
CDRT1-205ENST00000475944 BEST4Q8NFU0 473 aa8.06□□□□□ -1.12
CDRT1-205ENST00000475944 OR13F1Q8NGS4 319 aa8.06□□□□□ -1.12
CDRT1-205ENST00000475944 KIR2DL5BQ8NHK3 375 aa8.06□□□□□ -1.12
CDRT1-205ENST00000475944 NRG4Q8WWG1 115 aa8.06□□□□□ -1.12
CDRT1-205ENST00000475944 GPHA2Q96T91 129 aa8.06□□□□□ -1.12
CDRT1-205ENST00000475944 ZNF436Q9C0F3 470 aaPredicted RBP8.06□□□□□ -1.12
CDRT1-205ENST00000475944 COMMD5Q9GZQ3 224 aa8.06□□□□□ -1.12
CDRT1-205ENST00000475944 CCL28Q9NRJ3 127 aa8.06□□□□□ -1.12
CDRT1-205ENST00000475944 IGHV3-35A0A0C4DH35 117 aa8.05□□□□□ -1.12
CDRT1-205ENST00000475944 TGOLN2O43493 480 aa8.05□□□□□ -1.12
CDRT1-205ENST00000475944 HPRT1P00492 218 aa8.05□□□□□ -1.12
CDRT1-205ENST00000475944 PPYP01298 95 aa8.05□□□□□ -1.12
CDRT1-205ENST00000475944 NQO2P16083 231 aa8.05□□□□□ -1.12
CDRT1-205ENST00000475944 EWSR1Q01844 656 aaKnown RBP eCLIP8.05□□□□□ -1.12
CDRT1-205ENST00000475944 POU2AF1Q16633 256 aa8.05□□□□□ -1.12
CDRT1-205ENST00000475944 TPRA1Q86W33 373 aa8.05□□□□□ -1.12
CDRT1-205ENST00000475944 STPG3Q8N7X2 389 aa8.05□□□□□ -1.12
CDRT1-205ENST00000475944 VN1R17PQ8TDU5 208 aa8.05□□□□□ -1.12
CDRT1-205ENST00000475944 TMEM190Q8WZ59 177 aa8.05□□□□□ -1.12
CDRT1-205ENST00000475944 QTRT1Q9BXR0 403 aaKnown RBP8.05□□□□□ -1.12
CDRT1-205ENST00000475944 VCX3BQ9H321 246 aa8.05□□□□□ -1.12
CDRT1-205ENST00000475944 DAZ1Q9NQZ3 744 aaKnown RBP8.05□□□□□ -1.12
CDRT1-205ENST00000475944 UBQLN2Q9UHD9 624 aa8.05□□□□□ -1.12
CDRT1-205ENST00000475944 DAPK2Q9UIK4 370 aa8.05□□□□□ -1.12
CDRT1-205ENST00000475944 PLECQ15149 4684 aaKnown RBP8.05□□□□□ -1.12
CDRT1-205ENST00000475944 OR4C46A6NHA9 309 aa8.04□□□□□ -1.12
CDRT1-205ENST00000475944 SULT1C2O00338 296 aa8.04□□□□□ -1.12
CDRT1-205ENST00000475944 UPK2O00526 184 aa8.04□□□□□ -1.12
CDRT1-205ENST00000475944 FGF9P31371 208 aaPredicted RBP8.04□□□□□ -1.12
CDRT1-205ENST00000475944 FCGR2CP31995 323 aa8.04□□□□□ -1.12
CDRT1-205ENST00000475944 HSPA13P48723 471 aa8.04□□□□□ -1.12
CDRT1-205ENST00000475944 HSD17B13Q7Z5P4 300 aaPredicted RBP8.04□□□□□ -1.12
CDRT1-205ENST00000475944 GDPD1Q8N9F7 314 aa8.04□□□□□ -1.12
CDRT1-205ENST00000475944 DMBX1Q8NFW5 382 aa8.04□□□□□ -1.12
CDRT1-205ENST00000475944 LGALS14Q8TCE9 139 aa8.04□□□□□ -1.12
CDRT1-205ENST00000475944 CD300LFQ8TDQ1 290 aa8.04□□□□□ -1.12
CDRT1-205ENST00000475944 RNF183Q96D59 192 aa8.04□□□□□ -1.12
CDRT1-205ENST00000475944 BSCL2Q96G97 398 aaPredicted RBP8.04□□□□□ -1.12
CDRT1-205ENST00000475944 CNBD2Q96M20 576 aa8.04□□□□□ -1.12
CDRT1-205ENST00000475944 SLC5A7Q9GZV3 580 aa8.04□□□□□ -1.12
CDRT1-205ENST00000475944 PLEKHA2Q9HB19 425 aa8.04□□□□□ -1.12
CDRT1-205ENST00000475944 TMEM140Q9NV12 185 aa8.04□□□□□ -1.12
CDRT1-205ENST00000475944 TXNL4BQ9NX01 149 aaKnown RBP8.04□□□□□ -1.12
CDRT1-205ENST00000475944 RHBDL2Q9NX52 303 aa8.04□□□□□ -1.12
CDRT1-205ENST00000475944 RRP15Q9Y3B9 282 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms