RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, human

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPUSD3-215	ENST00000475470	OPN1MW2	P0DN77	364 aa		12.5	□□□□□ -0.41
RPUSD3-215	ENST00000475470	OPN1MW3	P0DN78	364 aa		12.5	□□□□□ -0.41
RPUSD3-215	ENST00000475470	MDK	P21741	143 aa	Predicted RBP	12.5	□□□□□ -0.41
RPUSD3-215	ENST00000475470	IL3RA	P26951	378 aa		12.5	□□□□□ -0.41
RPUSD3-215	ENST00000475470	FGF8	P55075	233 aa	Predicted RBP	12.5	□□□□□ -0.41
RPUSD3-215	ENST00000475470	TMEM177	Q53S58	311 aa		12.5	□□□□□ -0.41
RPUSD3-215	ENST00000475470	FFAR4	Q5NUL3	377 aa		12.5	□□□□□ -0.41
RPUSD3-215	ENST00000475470	SSX7	Q7RTT5	188 aa		12.5	□□□□□ -0.41
RPUSD3-215	ENST00000475470	SLC24A4	Q8NFF2	622 aa		12.5	□□□□□ -0.41
RPUSD3-215	ENST00000475470	NEIL1	Q96FI4	390 aa	Predicted RBP	12.5	□□□□□ -0.41
RPUSD3-215	ENST00000475470	FKBP11	Q9NYL4	201 aa		12.5	□□□□□ -0.41
RPUSD3-215	ENST00000475470	GNG13	Q9P2W3	67 aa		12.5	□□□□□ -0.41
RPUSD3-215	ENST00000475470	WDR83OS	Q9Y284	106 aa		12.5	□□□□□ -0.41
RPUSD3-215	ENST00000475470	TPR	P12270	2363 aa	Known RBP	12.49	□□□□□ -0.41
RPUSD3-215	ENST00000475470	PPIAL4C	A0A0B4J2A2	164 aa		12.49	□□□□□ -0.41
RPUSD3-215	ENST00000475470	PPIAL4G	P0DN37	164 aa		12.49	□□□□□ -0.41
RPUSD3-215	ENST00000475470	NPY1R	P25929	384 aa		12.49	□□□□□ -0.41
RPUSD3-215	ENST00000475470	ZNF137P	P52743	207 aa		12.49	□□□□□ -0.41
RPUSD3-215	ENST00000475470	FLI1	Q01543	452 aa	Predicted RBP	12.49	□□□□□ -0.41
RPUSD3-215	ENST00000475470	ZNF506	Q5JVG8	444 aa		12.49	□□□□□ -0.41
RPUSD3-215	ENST00000475470	PDPN	Q86YL7	162 aa		12.49	□□□□□ -0.41
RPUSD3-215	ENST00000475470	OR4C13	Q8NGP0	309 aa		12.49	□□□□□ -0.41
RPUSD3-215	ENST00000475470	PLEKHA3	Q9HB20	300 aa		12.49	□□□□□ -0.41
RPUSD3-215	ENST00000475470	SLC39A9	Q9NUM3	307 aa		12.49	□□□□□ -0.41
RPUSD3-215	ENST00000475470	MLX	Q9UH92	298 aa		12.49	□□□□□ -0.41
RPUSD3-215	ENST00000475470	ITPR1	Q14643	2758 aa		12.49	□□□□□ -0.41
RPUSD3-215	ENST00000475470	MAP1LC3B2	A6NCE7	125 aa		12.49	□□□□□ -0.41
RPUSD3-215	ENST00000475470	IGKV1D-33	P01593	117 aa		12.49	□□□□□ -0.41
RPUSD3-215	ENST00000475470	IGKV1-33	P01594	117 aa		12.49	□□□□□ -0.41
RPUSD3-215	ENST00000475470	ICAM4	Q14773	271 aa		12.49	□□□□□ -0.41
RPUSD3-215	ENST00000475470	AKIRIN2	Q53H80	203 aa		12.49	□□□□□ -0.41
RPUSD3-215	ENST00000475470	SOHLH1	Q5JUK2	328 aa		12.49	□□□□□ -0.41
RPUSD3-215	ENST00000475470	WDR25	Q64LD2	544 aa	Predicted RBP	12.49	□□□□□ -0.41
RPUSD3-215	ENST00000475470	RPP25L	Q8N5L8	163 aa	Known RBP	12.49	□□□□□ -0.41
RPUSD3-215	ENST00000475470	RXFP4	Q8TDU9	374 aa		12.49	□□□□□ -0.41
RPUSD3-215	ENST00000475470	TMEM170A	Q8WVE7	144 aa		12.49	□□□□□ -0.41
RPUSD3-215	ENST00000475470	MAP1LC3B	Q9GZQ8	125 aa		12.49	□□□□□ -0.41
RPUSD3-215	ENST00000475470	WASHC3	Q9Y3C0	194 aa		12.49	□□□□□ -0.41
RPUSD3-215	ENST00000475470	PRRX1	P54821	245 aa		12.48	□□□□□ -0.41
RPUSD3-215	ENST00000475470	PRCD	Q00LT1	54 aa		12.48	□□□□□ -0.41
RPUSD3-215	ENST00000475470	OR10G4	Q8NGN3	311 aa		12.48	□□□□□ -0.41
RPUSD3-215	ENST00000475470	OR10G9	Q8NGN4	311 aa		12.48	□□□□□ -0.41
RPUSD3-215	ENST00000475470	OR10G7	Q8NGN6	311 aa		12.48	□□□□□ -0.41
RPUSD3-215	ENST00000475470	TNFRSF14	Q92956	283 aa		12.48	□□□□□ -0.41
RPUSD3-215	ENST00000475470	PCGF1	Q9BSM1	259 aa		12.48	□□□□□ -0.41
RPUSD3-215	ENST00000475470	IGHV2-26	A0A0B4J1V2	119 aa		12.48	□□□□□ -0.41
RPUSD3-215	ENST00000475470	TEX50	A0A1B0GTY4	177 aa		12.48	□□□□□ -0.41
RPUSD3-215	ENST00000475470	PRSS46	E5RG02	174 aa		12.48	□□□□□ -0.41
RPUSD3-215	ENST00000475470	MPDU1	O75352	247 aa		12.48	□□□□□ -0.41
RPUSD3-215	ENST00000475470	CA2	P00918	260 aa		12.48	□□□□□ -0.41
RPUSD3-215	ENST00000475470	HSPB1	P04792	205 aa	Known RBP	12.48	□□□□□ -0.41
RPUSD3-215	ENST00000475470	AGA	P20933	346 aa		12.48	□□□□□ -0.41
RPUSD3-215	ENST00000475470	RAB13	P51153	203 aa		12.48	□□□□□ -0.41
RPUSD3-215	ENST00000475470	DLK1	P80370	383 aa		12.48	□□□□□ -0.41
RPUSD3-215	ENST00000475470	KHDC3L	Q587J8	217 aa		12.48	□□□□□ -0.41
RPUSD3-215	ENST00000475470	DTX2	Q86UW9	622 aa		12.48	□□□□□ -0.41
RPUSD3-215	ENST00000475470	OR5B3	Q8NH48	314 aa		12.48	□□□□□ -0.41
RPUSD3-215	ENST00000475470	HIVEP3	Q5T1R4	2406 aa		12.48	□□□□□ -0.41
RPUSD3-215	ENST00000475470	ZFP92	A6NM28	416 aa		12.47	□□□□□ -0.41
RPUSD3-215	ENST00000475470	MC5R	P33032	325 aa		12.47	□□□□□ -0.41
RPUSD3-215	ENST00000475470	CEBPG	P53567	150 aa		12.47	□□□□□ -0.41
RPUSD3-215	ENST00000475470	DLX1	P56177	255 aa		12.47	□□□□□ -0.41
RPUSD3-215	ENST00000475470	UNKL	Q9H9P5	680 aa	Known RBP	12.47	□□□□□ -0.41
RPUSD3-215	ENST00000475470	LOC102723971	A0A1B0GUV8	181 aa		12.47	□□□□□ -0.41
RPUSD3-215	ENST00000475470	hCG_1809904	A0A1W2PP81	198 aa		12.47	□□□□□ -0.41
RPUSD3-215	ENST00000475470		A0A1W2PPE2	198 aa		12.47	□□□□□ -0.41
RPUSD3-215	ENST00000475470		A0A1W2PR64	198 aa		12.47	□□□□□ -0.41
RPUSD3-215	ENST00000475470		A0A1W2PRV1	198 aa		12.47	□□□□□ -0.41
RPUSD3-215	ENST00000475470	PCP4L1	A6NKN8	68 aa		12.47	□□□□□ -0.41
RPUSD3-215	ENST00000475470		M0R036	132 aa		12.47	□□□□□ -0.41
RPUSD3-215	ENST00000475470	SRP19	P09132	144 aa	Known RBP	12.47	□□□□□ -0.41
RPUSD3-215	ENST00000475470	TREML4	Q6UXN2	200 aa		12.47	□□□□□ -0.41
RPUSD3-215	ENST00000475470	VSTM2A	Q8TAG5	236 aa		12.47	□□□□□ -0.41
RPUSD3-215	ENST00000475470	C8orf46	Q8TAG6	207 aa		12.47	□□□□□ -0.41
RPUSD3-215	ENST00000475470	CLEC7A	Q9BXN2	247 aa		12.47	□□□□□ -0.41
RPUSD3-215	ENST00000475470	ACTR3C	Q9C0K3	210 aa	Predicted RBP	12.47	□□□□□ -0.41
RPUSD3-215	ENST00000475470	COMMD5	Q9GZQ3	224 aa		12.47	□□□□□ -0.41
RPUSD3-215	ENST00000475470	SLC25A22	Q9H936	323 aa		12.47	□□□□□ -0.41
RPUSD3-215	ENST00000475470	CACNA1A	O00555	2505 aa		12.46	□□□□□ -0.41
RPUSD3-215	ENST00000475470	MALRD1	Q5VYJ5	2156 aa		12.46	□□□□□ -0.41
RPUSD3-215	ENST00000475470	LRBA	P50851	2863 aa		12.46	□□□□□ -0.41
RPUSD3-215	ENST00000475470	EIF3G	O75821	320 aa	Known RBP eCLIP	12.46	□□□□□ -0.41
RPUSD3-215	ENST00000475470	RBP4	P02753	201 aa		12.46	□□□□□ -0.41
RPUSD3-215	ENST00000475470	RPL8	P62917	257 aa	Known RBP	12.46	□□□□□ -0.41
RPUSD3-215	ENST00000475470	ACOT6	Q3I5F7	207 aa	Predicted RBP	12.46	□□□□□ -0.41
RPUSD3-215	ENST00000475470	CHODL	Q9H9P2	273 aa		12.46	□□□□□ -0.41
RPUSD3-215	ENST00000475470	CTXND1	A0A1B0GTU2	59 aa		12.46	□□□□□ -0.42
RPUSD3-215	ENST00000475470		A0A1W2PPR1	153 aa		12.46	□□□□□ -0.42
RPUSD3-215	ENST00000475470	ENSA	O43768	121 aa	Known RBP	12.46	□□□□□ -0.42
RPUSD3-215	ENST00000475470	FBP1	P09467	338 aa		12.46	□□□□□ -0.42
RPUSD3-215	ENST00000475470	BCL2	P10415	239 aa		12.46	□□□□□ -0.42
RPUSD3-215	ENST00000475470	USF1	P22415	310 aa	Predicted RBP	12.46	□□□□□ -0.42
RPUSD3-215	ENST00000475470	PRB3	Q04118	309 aa	Predicted RBP	12.46	□□□□□ -0.42
RPUSD3-215	ENST00000475470	HLA-DRB5	Q30154	266 aa		12.46	□□□□□ -0.42
RPUSD3-215	ENST00000475470	OR4A5	Q8NH83	315 aa		12.46	□□□□□ -0.42
RPUSD3-215	ENST00000475470	NPVF	Q9HCQ7	196 aa		12.46	□□□□□ -0.42
RPUSD3-215	ENST00000475470	ONECUT1	Q9UBC0	465 aa		12.46	□□□□□ -0.42
RPUSD3-215	ENST00000475470	HMGB3	O15347	200 aa	Known RBP	12.45	□□□□□ -0.42
RPUSD3-215	ENST00000475470	CYB5B	O43169	146 aa		12.45	□□□□□ -0.42
RPUSD3-215	ENST00000475470	IGLV1-47	P01700	117 aa		12.45	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms