RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 AUP1Q9Y679 476 aa11.05□□□□□ -0.64
TRAF4-210ENST00000475329 MED13LQ71F56 2210 aa11.05□□□□□ -0.64
TRAF4-210ENST00000475329 IGHV1-69DA0A0B4J2H0 117 aa11.04□□□□□ -0.64
TRAF4-210ENST00000475329 CENPVL3A0A0U1RRI6 287 aa11.04□□□□□ -0.64
TRAF4-210ENST00000475329 IGHV1-69P01742 117 aa11.04□□□□□ -0.64
TRAF4-210ENST00000475329 METTL15P1P0C7V9 234 aa11.04□□□□□ -0.64
TRAF4-210ENST00000475329 SAA4P35542 130 aa11.04□□□□□ -0.64
TRAF4-210ENST00000475329 VDAC2P45880 294 aaPredicted RBP11.04□□□□□ -0.64
TRAF4-210ENST00000475329 DYNLT3P51808 116 aa11.04□□□□□ -0.64
TRAF4-210ENST00000475329 HBG1P69891 147 aa11.04□□□□□ -0.64
TRAF4-210ENST00000475329 HBG2P69892 147 aa11.04□□□□□ -0.64
TRAF4-210ENST00000475329 RPP30P78346 268 aaKnown RBP11.04□□□□□ -0.64
TRAF4-210ENST00000475329 PRCDQ00LT1 54 aa11.04□□□□□ -0.64
TRAF4-210ENST00000475329 ZNF266Q14584 549 aa11.04□□□□□ -0.64
TRAF4-210ENST00000475329 PSG5Q15238 335 aa11.04□□□□□ -0.64
TRAF4-210ENST00000475329 TMEM14EPQ6UXP3 125 aa11.04□□□□□ -0.64
TRAF4-210ENST00000475329 TMEM217Q8N7C4 229 aa11.04□□□□□ -0.64
TRAF4-210ENST00000475329 UBAC2Q8NBM4 344 aa11.04□□□□□ -0.64
TRAF4-210ENST00000475329 OR5C1Q8NGR4 320 aa11.04□□□□□ -0.64
TRAF4-210ENST00000475329 RITA1Q96K30 269 aa11.04□□□□□ -0.64
TRAF4-210ENST00000475329 OR4C12Q96R67 309 aa11.04□□□□□ -0.64
TRAF4-210ENST00000475329 REG4Q9BYZ8 158 aa11.04□□□□□ -0.64
TRAF4-210ENST00000475329 COMMD5Q9GZQ3 224 aa11.04□□□□□ -0.64
TRAF4-210ENST00000475329 PLEKHA3Q9HB20 300 aa11.04□□□□□ -0.64
TRAF4-210ENST00000475329 WFDC1Q9HC57 220 aa11.04□□□□□ -0.64
TRAF4-210ENST00000475329 HEYLQ9NQ87 328 aaPredicted RBP11.04□□□□□ -0.64
TRAF4-210ENST00000475329 TACC2O95359 2948 aa11.04□□□□□ -0.64
TRAF4-210ENST00000475329 TNCP24821 2201 aa11.04□□□□□ -0.64
TRAF4-210ENST00000475329 NAV2Q8IVL1 2488 aa11.03□□□□□ -0.64
TRAF4-210ENST00000475329 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.03□□□□□ -0.642e-10■■■■□ 21.9
TRAF4-210ENST00000475329 TRAV40A0A0B4J280 105 aa11.03□□□□□ -0.64
TRAF4-210ENST00000475329 RNF223E7ERA6 249 aa11.03□□□□□ -0.64
TRAF4-210ENST00000475329 DFFBO76075 338 aa11.03□□□□□ -0.64
TRAF4-210ENST00000475329 MOSP00540 346 aa11.03□□□□□ -0.64
TRAF4-210ENST00000475329 HTR2BP41595 481 aa11.03□□□□□ -0.64
TRAF4-210ENST00000475329 CLINT1Q14677 625 aa11.03□□□□□ -0.64
TRAF4-210ENST00000475329 MMD2Q8IY49 270 aa11.03□□□□□ -0.64
TRAF4-210ENST00000475329 DYNAPQ8N1N2 210 aa11.03□□□□□ -0.64
TRAF4-210ENST00000475329 OR1L8Q8NGR8 309 aa11.03□□□□□ -0.64
TRAF4-210ENST00000475329 C17orf50Q8WW18 174 aa11.03□□□□□ -0.64
TRAF4-210ENST00000475329 Q96MF0 132 aa11.03□□□□□ -0.64
TRAF4-210ENST00000475329 ATP5SQ99766 215 aa11.03□□□□□ -0.64
TRAF4-210ENST00000475329 HINT2Q9BX68 163 aa11.03□□□□□ -0.64
TRAF4-210ENST00000475329 C7orf69Q9H7B7 122 aa11.03□□□□□ -0.64
TRAF4-210ENST00000475329 ZNF430Q9H8G1 570 aaPredicted RBP11.03□□□□□ -0.64
TRAF4-210ENST00000475329 HIF1ANQ9NWT6 349 aa11.03□□□□□ -0.64
TRAF4-210ENST00000475329 TEX50A0A1B0GTY4 177 aa11.02□□□□□ -0.65
TRAF4-210ENST00000475329 IFNA10P01566 189 aa11.02□□□□□ -0.65
TRAF4-210ENST00000475329 IGKV1D-33P01593 117 aa11.02□□□□□ -0.65
TRAF4-210ENST00000475329 IGKV1-33P01594 117 aa11.02□□□□□ -0.65
TRAF4-210ENST00000475329 CRYGBP07316 175 aa11.02□□□□□ -0.65
TRAF4-210ENST00000475329 SNRNP70P08621 437 aaKnown RBP11.02□□□□□ -0.65
TRAF4-210ENST00000475329 MYOD1P15172 320 aa11.02□□□□□ -0.65
TRAF4-210ENST00000475329 CNTFRP26992 372 aa11.02□□□□□ -0.65
TRAF4-210ENST00000475329 RAB14P61106 215 aa11.02□□□□□ -0.65
TRAF4-210ENST00000475329 HES1Q14469 280 aa11.02□□□□□ -0.65
TRAF4-210ENST00000475329 NDUFA5Q16718 116 aa11.02□□□□□ -0.65
TRAF4-210ENST00000475329 EIF5AL1Q6IS14 154 aaKnown RBP11.02□□□□□ -0.65
TRAF4-210ENST00000475329 HAPLN4Q86UW8 402 aa11.02□□□□□ -0.65
TRAF4-210ENST00000475329 THNSL2Q86YJ6 484 aa11.02□□□□□ -0.65
TRAF4-210ENST00000475329 KRTAP1-3Q8IUG1 177 aa11.02□□□□□ -0.65
TRAF4-210ENST00000475329 LILRB2Q8N423 598 aa11.02□□□□□ -0.65
TRAF4-210ENST00000475329 OR2T10Q8NGZ9 312 aa11.02□□□□□ -0.65
TRAF4-210ENST00000475329 ARV1Q9H2C2 271 aa11.02□□□□□ -0.65
TRAF4-210ENST00000475329 TPSG1Q9NRR2 321 aa11.02□□□□□ -0.65
TRAF4-210ENST00000475329 METTL1Q9UBP6 276 aaKnown RBP11.02□□□□□ -0.65
TRAF4-210ENST00000475329 SIGLEC9Q9Y336 463 aa11.02□□□□□ -0.65
TRAF4-210ENST00000475329 MAST4O15021 2626 aa11.02□□□□□ -0.65
TRAF4-210ENST00000475329 CELSR2Q9HCU4 2923 aa11.01□□□□□ -0.65
TRAF4-210ENST00000475329 C15orf62A8K5M9 175 aa11.01□□□□□ -0.65
TRAF4-210ENST00000475329 J3QLI3 93 aa11.01□□□□□ -0.65
TRAF4-210ENST00000475329 NBR2O15453 112 aa11.01□□□□□ -0.65
TRAF4-210ENST00000475329 OR8U8P0C7N1 319 aa11.01□□□□□ -0.65
TRAF4-210ENST00000475329 PAX6P26367 422 aa11.01□□□□□ -0.65
TRAF4-210ENST00000475329 BRS3P32247 399 aa11.01□□□□□ -0.65
TRAF4-210ENST00000475329 MAS1LP35410 378 aa11.01□□□□□ -0.65
TRAF4-210ENST00000475329 F2RL1P55085 397 aa11.01□□□□□ -0.65
TRAF4-210ENST00000475329 SLC38A11Q08AI6 406 aa11.01□□□□□ -0.65
TRAF4-210ENST00000475329 MMDQ15546 238 aa11.01□□□□□ -0.65
TRAF4-210ENST00000475329 PRSS8Q16651 343 aa11.01□□□□□ -0.65
TRAF4-210ENST00000475329 OR8G2PQ6IF36 304 aa11.01□□□□□ -0.65
TRAF4-210ENST00000475329 PIP4P2Q8N4L2 257 aa11.01□□□□□ -0.65
TRAF4-210ENST00000475329 AJUBAQ96IF1 538 aa11.01□□□□□ -0.65
TRAF4-210ENST00000475329 EAF1Q96JC9 268 aaPredicted RBP11.01□□□□□ -0.65
TRAF4-210ENST00000475329 NDUFA4L2Q9NRX3 87 aa11.01□□□□□ -0.65
TRAF4-210ENST00000475329 KIAA1456Q9P272 454 aa11.01□□□□□ -0.65
TRAF4-210ENST00000475329 IGHV3OR16-10A0A075B7F0 116 aa11□□□□□ -0.65
TRAF4-210ENST00000475329 A0A1W2PN81 502 aa11□□□□□ -0.65
TRAF4-210ENST00000475329 CYSRT1A8MQ03 144 aa11□□□□□ -0.65
TRAF4-210ENST00000475329 RRHO14718 337 aa11□□□□□ -0.65
TRAF4-210ENST00000475329 ACTL6BO94805 426 aa11□□□□□ -0.65
TRAF4-210ENST00000475329 IFNA5P01569 189 aa11□□□□□ -0.65
TRAF4-210ENST00000475329 OPN1MWP04001 364 aa11□□□□□ -0.65
TRAF4-210ENST00000475329 OPN1MW2P0DN77 364 aa11□□□□□ -0.65
TRAF4-210ENST00000475329 OPN1MW3P0DN78 364 aa11□□□□□ -0.65
TRAF4-210ENST00000475329 CHRNA7P36544 502 aa11□□□□□ -0.65
TRAF4-210ENST00000475329 RAB11AP62491 216 aa11□□□□□ -0.65
TRAF4-210ENST00000475329 ARL16Q0P5N6 197 aa11□□□□□ -0.65
TRAF4-210ENST00000475329 EBI3Q14213 229 aa11□□□□□ -0.65
TRAF4-210ENST00000475329 HNF4GQ14541 408 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms