RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 IL18Q14116 193 aa8.87□□□□□ -0.99
CPNE1-222ENST00000473373 MRGPRG-AS1Q2M3A8 158 aa8.87□□□□□ -0.99
CPNE1-222ENST00000473373 C15orf32Q32M92 178 aa8.87□□□□□ -0.99
CPNE1-222ENST00000473373 SCGB2B2Q4G0G5 96 aa8.87□□□□□ -0.99
CPNE1-222ENST00000473373 ZNF343Q6P1L6 599 aa8.87□□□□□ -0.99
CPNE1-222ENST00000473373 TTC9CQ8N5M4 171 aa8.87□□□□□ -0.99
CPNE1-222ENST00000473373 NECAP1Q8NC96 275 aa8.87□□□□□ -0.99
CPNE1-222ENST00000473373 RAB2BQ8WUD1 216 aa8.87□□□□□ -0.99
CPNE1-222ENST00000473373 DGCR14Q96DF8 476 aaKnown RBP8.87□□□□□ -0.99
CPNE1-222ENST00000473373 C6orf62Q9GZU0 229 aaPredicted RBP8.87□□□□□ -0.99
CPNE1-222ENST00000473373 PLEKHA2Q9HB19 425 aa8.87□□□□□ -0.99
CPNE1-222ENST00000473373 PEMTQ9UBM1 199 aa8.87□□□□□ -0.99
CPNE1-222ENST00000473373 ANAPC10Q9UM13 185 aa8.87□□□□□ -0.99
CPNE1-222ENST00000473373 MARCH11A6NNE9 402 aa8.86□□□□□ -0.99
CPNE1-222ENST00000473373 IGHV3-23P01764 117 aa8.86□□□□□ -0.99
CPNE1-222ENST00000473373 MYOD1P15172 320 aa8.86□□□□□ -0.99
CPNE1-222ENST00000473373 SPNP16150 400 aa8.86□□□□□ -0.99
CPNE1-222ENST00000473373 HIST1H1BP16401 226 aaKnown RBP8.86□□□□□ -0.99
CPNE1-222ENST00000473373 G6PCP35575 357 aa8.86□□□□□ -0.99
CPNE1-222ENST00000473373 PPP5CP53041 499 aa8.86□□□□□ -0.99
CPNE1-222ENST00000473373 FAM209BQ5JX69 171 aa8.86□□□□□ -0.99
CPNE1-222ENST00000473373 C11orf87Q6NUJ2 197 aa8.86□□□□□ -0.99
CPNE1-222ENST00000473373 HAPLN4Q86UW8 402 aa8.86□□□□□ -0.99
CPNE1-222ENST00000473373 SLC38A6Q8IZM9 456 aa8.86□□□□□ -0.99
CPNE1-222ENST00000473373 OR9G4Q8NGQ1 327 aa8.86□□□□□ -0.99
CPNE1-222ENST00000473373 OR52I2Q8NH67 350 aa8.86□□□□□ -0.99
CPNE1-222ENST00000473373 RNASE11Q8TAA1 199 aaKnown RBP8.86□□□□□ -0.99
CPNE1-222ENST00000473373 DYNLRB2Q8TF09 96 aa8.86□□□□□ -0.99
CPNE1-222ENST00000473373 EEF1AKMT3Q96AZ1 226 aa8.86□□□□□ -0.99
CPNE1-222ENST00000473373 DIRAS2Q96HU8 199 aa8.86□□□□□ -0.99
CPNE1-222ENST00000473373 SLC2A9Q9NRM0 540 aa8.86□□□□□ -0.99
CPNE1-222ENST00000473373 THYN1Q9P016 225 aa8.86□□□□□ -0.99
CPNE1-222ENST00000473373 KLK11Q9UBX7 282 aa8.86□□□□□ -0.99
CPNE1-222ENST00000473373 SMAD5-AS1Q9Y6J3 95 aa8.86□□□□□ -0.99
CPNE1-222ENST00000473373 S4R3C0 116 aa8.86□□□□□ -0.99
CPNE1-222ENST00000473373 NPIPB5A8MRT5 1133 aa8.85□□□□□ -0.99
CPNE1-222ENST00000473373 TEX22C9J3V5 150 aa8.85□□□□□ -0.99
CPNE1-222ENST00000473373 UPK2O00526 184 aa8.85□□□□□ -0.99
CPNE1-222ENST00000473373 TRBV12-3P01733 135 aa8.85□□□□□ -0.99
CPNE1-222ENST00000473373 SERPINE2P07093 398 aa8.85□□□□□ -0.99
CPNE1-222ENST00000473373 IL6RP08887 468 aaPredicted RBP8.85□□□□□ -0.99
CPNE1-222ENST00000473373 ZNF735P0CB33 412 aa8.85□□□□□ -0.99
CPNE1-222ENST00000473373 GP9P14770 177 aa8.85□□□□□ -0.99
CPNE1-222ENST00000473373 AREGP15514 252 aa8.85□□□□□ -0.99
CPNE1-222ENST00000473373 PSMB6P28072 239 aa8.85□□□□□ -0.99
CPNE1-222ENST00000473373 ALDH3B2P48448 385 aa8.85□□□□□ -0.99
CPNE1-222ENST00000473373 BRWD1-AS2P59051 145 aa8.85□□□□□ -0.99
CPNE1-222ENST00000473373 TAS2R19P59542 299 aa8.85□□□□□ -0.99
CPNE1-222ENST00000473373 SPCS2Q15005 226 aa8.85□□□□□ -0.99
CPNE1-222ENST00000473373 CLEC19AQ6UXS0 136 aa8.85□□□□□ -0.99
CPNE1-222ENST00000473373 H2BFWTQ7Z2G1 175 aa8.85□□□□□ -0.99
CPNE1-222ENST00000473373 TBC1D26Q86UD7 250 aa8.85□□□□□ -0.99
CPNE1-222ENST00000473373 LYSMD2Q8IV50 215 aa8.85□□□□□ -0.99
CPNE1-222ENST00000473373 LAX1Q8IWV1 398 aa8.85□□□□□ -0.99
CPNE1-222ENST00000473373 B9D2Q9BPU9 175 aa8.85□□□□□ -0.99
CPNE1-222ENST00000473373 QTRT1Q9BXR0 403 aaKnown RBP8.85□□□□□ -0.99
CPNE1-222ENST00000473373 TRAV3A0A0B4J244 114 aa8.84□□□□□ -0.99
CPNE1-222ENST00000473373 PPP5D1E7EU14 171 aa8.84□□□□□ -0.99
CPNE1-222ENST00000473373 H0Y980 276 aa8.84□□□□□ -0.99
CPNE1-222ENST00000473373 BRI3O95415 125 aa8.84□□□□□ -0.99
CPNE1-222ENST00000473373 RAB3DO95716 219 aa8.84□□□□□ -0.99
CPNE1-222ENST00000473373 CD3DP04234 171 aa8.84□□□□□ -0.99
CPNE1-222ENST00000473373 TRAPPC2P0DI81 140 aa8.84□□□□□ -0.99
CPNE1-222ENST00000473373 TRAPPC2BP0DI82 140 aa8.84□□□□□ -0.99
CPNE1-222ENST00000473373 ARL3P36405 182 aa8.84□□□□□ -0.99
CPNE1-222ENST00000473373 RPL5P46777 297 aaKnown RBP8.84□□□□□ -0.99
CPNE1-222ENST00000473373 TMBIM6P55061 237 aa8.84□□□□□ -0.99
CPNE1-222ENST00000473373 OR2B8PP59922 312 aa8.84□□□□□ -0.99
CPNE1-222ENST00000473373 ZNF45Q02386 682 aa8.84□□□□□ -0.99
CPNE1-222ENST00000473373 THOC7Q6I9Y2 204 aaKnown RBP8.84□□□□□ -0.99
CPNE1-222ENST00000473373 SLC25A24Q6NUK1 477 aa8.84□□□□□ -0.99
CPNE1-222ENST00000473373 C19orf35Q6ZS72 473 aa8.84□□□□□ -0.99
CPNE1-222ENST00000473373 GTSCR1Q86UQ5 136 aa8.84□□□□□ -0.99
CPNE1-222ENST00000473373 CCDC71LQ8N9Z2 235 aa8.84□□□□□ -0.99
CPNE1-222ENST00000473373 OR1L8Q8NGR8 309 aa8.84□□□□□ -0.99
CPNE1-222ENST00000473373 OR4A16Q8NH70 328 aa8.84□□□□□ -0.99
CPNE1-222ENST00000473373 TMEM56Q96MV1 263 aa8.84□□□□□ -0.99
CPNE1-222ENST00000473373 TSC22D3Q99576 134 aa8.84□□□□□ -0.99
CPNE1-222ENST00000473373 ASCL2Q99929 193 aa8.84□□□□□ -0.99
CPNE1-222ENST00000473373 FKBP11Q9NYL4 201 aa8.84□□□□□ -0.99
CPNE1-222ENST00000473373 COPZ2Q9P299 210 aa8.84□□□□□ -0.99
CPNE1-222ENST00000473373 NSG2Q9Y328 171 aa8.84□□□□□ -0.99
CPNE1-222ENST00000473373 OR51B2Q9Y5P1 312 aa8.84□□□□□ -0.99
CPNE1-222ENST00000473373 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.83□□□□□ -1
CPNE1-222ENST00000473373 ZNF320A2RRD8 509 aa8.83□□□□□ -1
CPNE1-222ENST00000473373 E7EUB6 86 aa8.83□□□□□ -1
CPNE1-222ENST00000473373 GABARAPH6UMI1 98 aa8.83□□□□□ -1
CPNE1-222ENST00000473373 CTDSP2O14595 271 aa8.83□□□□□ -1
CPNE1-222ENST00000473373 GGCTO75223 188 aaKnown RBP8.83□□□□□ -1
CPNE1-222ENST00000473373 OR13C7P0DN81 318 aa8.83□□□□□ -1
CPNE1-222ENST00000473373 TBPP20226 339 aa8.83□□□□□ -1
CPNE1-222ENST00000473373 AKR1C2P52895 323 aa8.83□□□□□ -1
CPNE1-222ENST00000473373 MRPS10P82664 201 aaKnown RBP8.83□□□□□ -1
CPNE1-222ENST00000473373 KLF5Q13887 457 aaPredicted RBP8.83□□□□□ -1
CPNE1-222ENST00000473373 POU2AF1Q16633 256 aa8.83□□□□□ -1
CPNE1-222ENST00000473373 TRIM16LQ309B1 348 aa8.83□□□□□ -1
CPNE1-222ENST00000473373 LCN12Q6JVE5 192 aa8.83□□□□□ -1
CPNE1-222ENST00000473373 SGPP2Q8IWX5 399 aa8.83□□□□□ -1
CPNE1-222ENST00000473373 ARRDC1Q8N5I2 433 aa8.83□□□□□ -1
CPNE1-222ENST00000473373 ZFAND1Q8TCF1 268 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms