RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 DUXBA0A1W2PPF3 345 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 CNOT1A5YKK6 2376 aaKnown RBP4.59□□□□□ -1.67
RTF1-203ENST00000473214 FAM220BPB1ANY3 271 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 C9JAW5 83 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 FFAR1O14842 300 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 CECR9P0C854 216 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 OR12D1P0DN82 309 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 CD52P31358 61 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 TAF6P49848 677 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 ZNF140P52738 457 aaPredicted RBP4.59□□□□□ -1.67
RTF1-203ENST00000473214 NDUFV3P56181 108 aaKnown RBP4.59□□□□□ -1.67
RTF1-203ENST00000473214 ADIGQ0VDE8 80 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 KIAA0087Q14695 138 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 RBMY1FQ15415 496 aaKnown RBP4.59□□□□□ -1.67
RTF1-203ENST00000473214 SIX1Q15475 284 aaPredicted RBP4.59□□□□□ -1.67
RTF1-203ENST00000473214 TGIF1Q15583 401 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 LAMA4Q16363 1823 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 ABCA11PQ4W5N1 156 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 TMEM69Q5SWH9 247 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 NXNL2Q5VZ03 156 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 SBSNQ6UWP8 590 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 Q6ZRU5 148 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 Q6ZSR6 202 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 CLEC20AQ6ZU45 233 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 TCF23Q7RTU1 214 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 NAV2Q8IVL1 2488 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 SGPP2Q8IWX5 399 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 OR5W2Q8NH69 310 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 NEURL3Q96EH8 262 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 ATXN7L3BQ96GX2 97 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 PRAC1Q96KF2 57 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 PLIN4Q96Q06 1357 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 ANAPC13Q9BS18 74 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 C19orf24Q9BVV8 132 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 OR2H1Q9GZK4 316 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 CDC42EP4Q9H3Q1 356 aaKnown RBP4.59□□□□□ -1.67
RTF1-203ENST00000473214 MARCH5Q9NX47 278 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 NAT8BQ9UHF3 227 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 BAIAP2Q9UQB8 552 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 HIGD1AQ9Y241 93 aa4.59□□□□□ -1.67
RTF1-203ENST00000473214 HELZ2Q9BYK8 2649 aaKnown RBP4.59□□□□□ -1.68
RTF1-203ENST00000473214 MYH10P35580 1976 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 BPTFQ12830 3046 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 IGSF10Q6WRI0 2623 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 TRAV9-2A0A087WT02 112 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 TRAV8-1A0A0A6YYK1 113 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 C5orf63A6NC05 138 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 C16orf97H3BN30 126 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 M0R143 59 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 OR7C2O60412 319 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 IFNA17P01571 189 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 PRB1P04280 392 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 GYPCP04921 128 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 ZNF30P17039 623 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 AZU1P20160 251 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 FGF7P21781 194 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 SRIP30626 198 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 PPP1CCP36873 323 aaKnown RBP4.58□□□□□ -1.68
RTF1-203ENST00000473214 MP68P56378 58 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 FKBP3Q00688 224 aaKnown RBP4.58□□□□□ -1.68
RTF1-203ENST00000473214 TIMM50Q3ZCQ8 353 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 ZFP69Q49AA0 526 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 SCGB2B2Q4G0G5 96 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 UBE2NLQ5JXB2 153 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 REG3GQ6UW15 175 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 RNF165Q6ZSG1 346 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 TRPT1Q86TN4 253 aaKnown RBP4.58□□□□□ -1.68
RTF1-203ENST00000473214 C11orf53Q8IXP5 236 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 C8orf59Q8N0T1 100 aaPredicted RBP4.58□□□□□ -1.68
RTF1-203ENST00000473214 SLC25A45Q8N413 288 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 STPG4Q8N801 248 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 PPTC7Q8NI37 304 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 STARD4Q96DR4 205 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 TSPAN32Q96QS1 320 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 ZNF184Q99676 751 aaPredicted RBP4.58□□□□□ -1.68
RTF1-203ENST00000473214 PAXXQ9BUH6 204 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 MRPL16Q9NX20 251 aaKnown RBP4.58□□□□□ -1.68
RTF1-203ENST00000473214 TNFSF18Q9UNG2 199 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 PCYT1BQ9Y5K3 369 aaPredicted RBP4.58□□□□□ -1.68
RTF1-203ENST00000473214 DMXL2Q8TDJ6 3036 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 MYH7P12883 1935 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 MIA3Q5JRA6 1907 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 TMEM131Q92545 1883 aa4.58□□□□□ -1.68
RTF1-203ENST00000473214 DOCK8Q8NF50 2099 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 IGHV2-26A0A0B4J1V2 119 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 A0A0G2JN53 185 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 A0A0J9YY10 115 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 LOC102725191A0A1B0GVB3 256 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 A0A1B0GX78 115 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 FABP5P3A8MUU1 101 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 CORTO00230 105 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 PIRO00625 290 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 OR2H2O95918 312 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 LAMP1P11279 417 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 TDGF1P13385 188 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 CERS1P27544 350 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 GABRA2P47869 451 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 ATP5G3P48201 142 aa4.57□□□□□ -1.68
RTF1-203ENST00000473214 RPL34P49207 117 aaKnown RBP4.57□□□□□ -1.68
RTF1-203ENST00000473214 ZNF138P52744 262 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms