RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 RPA2P15927 270 aa6.83□□□□□ -1.32
VCL-204ENST00000472585 NFYAP23511 347 aaPredicted RBP6.83□□□□□ -1.32
VCL-204ENST00000472585 RPL27AP46776 148 aaKnown RBP6.83□□□□□ -1.32
VCL-204ENST00000472585 CBX3Q13185 183 aa6.83□□□□□ -1.32
VCL-204ENST00000472585 TPBGQ13641 420 aa6.83□□□□□ -1.32
VCL-204ENST00000472585 HES5Q5TA89 166 aa6.83□□□□□ -1.32
VCL-204ENST00000472585 ZNF773Q6PK81 442 aa6.83□□□□□ -1.32
VCL-204ENST00000472585 RBPMS2Q6ZRY4 209 aaKnown RBP6.83□□□□□ -1.32
VCL-204ENST00000472585 APRG1Q8IVJ8 170 aa6.83□□□□□ -1.32
VCL-204ENST00000472585 OR10R2Q8NGX6 335 aa6.83□□□□□ -1.32
VCL-204ENST00000472585 TMEM167AQ8TBQ9 72 aa6.83□□□□□ -1.32
VCL-204ENST00000472585 RAB3CQ96E17 227 aa6.83□□□□□ -1.32
VCL-204ENST00000472585 OR2A7Q96R45 310 aa6.83□□□□□ -1.32
VCL-204ENST00000472585 DCUN1D5Q9BTE7 237 aa6.83□□□□□ -1.32
VCL-204ENST00000472585 ZNF436Q9C0F3 470 aaPredicted RBP6.83□□□□□ -1.32
VCL-204ENST00000472585 C5orf66Q9H5L9 145 aa6.83□□□□□ -1.32
VCL-204ENST00000472585 MRPL27Q9P0M9 148 aaKnown RBP6.83□□□□□ -1.32
VCL-204ENST00000472585 APLNQ9ULZ1 77 aa6.83□□□□□ -1.32
VCL-204ENST00000472585 RBMX2Q9Y388 322 aaKnown RBP6.83□□□□□ -1.32
VCL-204ENST00000472585 RBM7Q9Y580 266 aaKnown RBP6.83□□□□□ -1.32
VCL-204ENST00000472585 IGHV3OR16-8A0A075B7F1 116 aa6.82□□□□□ -1.32
VCL-204ENST00000472585 KIR2DL5BA0A0G2JN68 375 aa6.82□□□□□ -1.32
VCL-204ENST00000472585 KIR2DL5BA0A0G2JPC4 375 aa6.82□□□□□ -1.32
VCL-204ENST00000472585 IGLC7A0M8Q6 106 aa6.82□□□□□ -1.32
VCL-204ENST00000472585 PTGES3LE9PB15 166 aa6.82□□□□□ -1.32
VCL-204ENST00000472585 TSPAN4O14817 238 aa6.82□□□□□ -1.32
VCL-204ENST00000472585 GALP22466 123 aa6.82□□□□□ -1.32
VCL-204ENST00000472585 GPR183P32249 361 aa6.82□□□□□ -1.32
VCL-204ENST00000472585 OR10A3P58181 314 aa6.82□□□□□ -1.32
VCL-204ENST00000472585 FABP5Q01469 135 aa6.82□□□□□ -1.32
VCL-204ENST00000472585 MED22Q15528 200 aa6.82□□□□□ -1.32
VCL-204ENST00000472585 Q6ZS49 121 aa6.82□□□□□ -1.32
VCL-204ENST00000472585 SSX9Q7RTT3 188 aa6.82□□□□□ -1.32
VCL-204ENST00000472585 SLC25A42Q86VD7 318 aa6.82□□□□□ -1.32
VCL-204ENST00000472585 KIR2DL5AQ8N109 375 aa6.82□□□□□ -1.32
VCL-204ENST00000472585 ZNF645Q8N7E2 425 aa6.82□□□□□ -1.32
VCL-204ENST00000472585 OR5B3Q8NH48 314 aa6.82□□□□□ -1.32
VCL-204ENST00000472585 KIR2DL5BQ8NHK3 375 aa6.82□□□□□ -1.32
VCL-204ENST00000472585 EEF1AKMT3Q96AZ1 226 aa6.82□□□□□ -1.32
VCL-204ENST00000472585 SPAG8Q99932 426 aaPredicted RBP6.82□□□□□ -1.32
VCL-204ENST00000472585 GINS4Q9BRT9 223 aa6.82□□□□□ -1.32
VCL-204ENST00000472585 CHRDL1Q9BU40 450 aa6.82□□□□□ -1.32
VCL-204ENST00000472585 MND1Q9BWT6 205 aa6.82□□□□□ -1.32
VCL-204ENST00000472585 RAB22AQ9UL26 194 aa6.82□□□□□ -1.32
VCL-204ENST00000472585 TRBV7-1A0A0A6YYK4 115 aa6.81□□□□□ -1.32
VCL-204ENST00000472585 DEFB4AO15263 64 aa6.81□□□□□ -1.32
VCL-204ENST00000472585 HIST1H1DP16402 221 aaKnown RBP6.81□□□□□ -1.32
VCL-204ENST00000472585 ADMP35318 185 aa6.81□□□□□ -1.32
VCL-204ENST00000472585 MFAP2P55001 183 aa6.81□□□□□ -1.32
VCL-204ENST00000472585 ELLP55199 621 aaPredicted RBP6.81□□□□□ -1.32
VCL-204ENST00000472585 OR2B8PP59922 312 aa6.81□□□□□ -1.32
VCL-204ENST00000472585 ARFRP1Q13795 201 aa6.81□□□□□ -1.32
VCL-204ENST00000472585 OR4A47Q6IF82 309 aa6.81□□□□□ -1.32
VCL-204ENST00000472585 KCTD9Q7L273 389 aa6.81□□□□□ -1.32
VCL-204ENST00000472585 NR2C2APQ86WQ0 139 aa6.81□□□□□ -1.32
VCL-204ENST00000472585 C8orf59Q8N0T1 100 aaPredicted RBP6.81□□□□□ -1.32
VCL-204ENST00000472585 MFSD4AQ8N468 514 aa6.81□□□□□ -1.32
VCL-204ENST00000472585 MAPKAPK5-AS1Q8N8E1 139 aa6.81□□□□□ -1.32
VCL-204ENST00000472585 OR10W1Q8NGF6 305 aa6.81□□□□□ -1.32
VCL-204ENST00000472585 MARC2Q969Z3 335 aa6.81□□□□□ -1.32
VCL-204ENST00000472585 RARRES2Q99969 163 aa6.81□□□□□ -1.32
VCL-204ENST00000472585 SPATA2Q9UM82 520 aa6.81□□□□□ -1.32
VCL-204ENST00000472585 OR2W1Q9Y3N9 320 aa6.81□□□□□ -1.32
VCL-204ENST00000472585 V9GY05 133 aa6.81□□□□□ -1.32
VCL-204ENST00000472585 PKD1P98161 4303 aa6.8□□□□□ -1.32
VCL-204ENST00000472585 IGHV3-21A0A0B4J1V1 117 aa6.8□□□□□ -1.32
VCL-204ENST00000472585 DPPA5A6NC42 116 aa6.8□□□□□ -1.32
VCL-204ENST00000472585 C11orf94C9JXX5 98 aa6.8□□□□□ -1.32
VCL-204ENST00000472585 TGOLN2O43493 480 aa6.8□□□□□ -1.32
VCL-204ENST00000472585 ZNF207O43670 478 aaKnown RBP6.8□□□□□ -1.32
VCL-204ENST00000472585 CTSDP07339 412 aaPredicted RBP6.8□□□□□ -1.32
VCL-204ENST00000472585 PTHLHP12272 177 aa6.8□□□□□ -1.32
VCL-204ENST00000472585 CRHBPP24387 322 aa6.8□□□□□ -1.32
VCL-204ENST00000472585 PTBP1P26599 531 aaKnown RBP eCLIP6.8□□□□□ -1.32
VCL-204ENST00000472585 CALRP27797 417 aaKnown RBP6.8□□□□□ -1.32
VCL-204ENST00000472585 MAS1LP35410 378 aa6.8□□□□□ -1.32
VCL-204ENST00000472585 PSMD7P51665 324 aa6.8□□□□□ -1.32
VCL-204ENST00000472585 RPL8P62917 257 aaKnown RBP6.8□□□□□ -1.32
VCL-204ENST00000472585 PLET1Q6UQ28 207 aa6.8□□□□□ -1.32
VCL-204ENST00000472585 ZNF575Q86XF7 245 aa6.8□□□□□ -1.32
VCL-204ENST00000472585 PACRGLQ8N7B6 248 aa6.8□□□□□ -1.32
VCL-204ENST00000472585 TMEM190Q8WZ59 177 aa6.8□□□□□ -1.32
VCL-204ENST00000472585 C6orf62Q9GZU0 229 aaPredicted RBP6.8□□□□□ -1.32
VCL-204ENST00000472585 TAS2R8Q9NYW2 309 aa6.8□□□□□ -1.32
VCL-204ENST00000472585 UFC1Q9Y3C8 167 aa6.8□□□□□ -1.32
VCL-204ENST00000472585 OR2T8A6NH00 312 aa6.79□□□□□ -1.32
VCL-204ENST00000472585 M0R2N4 97 aa6.79□□□□□ -1.32
VCL-204ENST00000472585 RTL8CO15255 209 aa6.79□□□□□ -1.32
VCL-204ENST00000472585 SSX5O60225 188 aa6.79□□□□□ -1.32
VCL-204ENST00000472585 CREBL2O60519 120 aaPredicted RBP6.79□□□□□ -1.32
VCL-204ENST00000472585 DEFA4P12838 97 aa6.79□□□□□ -1.32
VCL-204ENST00000472585 HIST1H1BP16401 226 aaKnown RBP6.79□□□□□ -1.32
VCL-204ENST00000472585 HLA-GP17693 338 aa6.79□□□□□ -1.32
VCL-204ENST00000472585 MRPS15P82914 257 aaKnown RBP6.79□□□□□ -1.32
VCL-204ENST00000472585 CDNFQ49AH0 187 aa6.79□□□□□ -1.32
VCL-204ENST00000472585 C10orf67Q8IYJ2 551 aa6.79□□□□□ -1.32
VCL-204ENST00000472585 CENPSQ8N2Z9 138 aa6.79□□□□□ -1.32
VCL-204ENST00000472585 OR11H2Q8NH07 326 aa6.79□□□□□ -1.32
VCL-204ENST00000472585 CD300LFQ8TDQ1 290 aa6.79□□□□□ -1.32
VCL-204ENST00000472585 TCTEX1D2Q8WW35 142 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms