RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 KLHDC1Q8N7A1 406 aa11.51□□□□□ -0.57
SMARCD3-207ENST00000472103 SRSF12Q8WXF0 261 aaKnown RBP11.51□□□□□ -0.57
SMARCD3-207ENST00000472103 IL22RA2Q969J5 263 aa11.51□□□□□ -0.57
SMARCD3-207ENST00000472103 AIFM2Q9BRQ8 373 aa11.51□□□□□ -0.57
SMARCD3-207ENST00000472103 MARVELD1Q9BSK0 173 aa11.51□□□□□ -0.57
SMARCD3-207ENST00000472103 A0A0B4J293 547 aa11.5□□□□□ -0.57
SMARCD3-207ENST00000472103 HMX3A6NHT5 357 aa11.5□□□□□ -0.57
SMARCD3-207ENST00000472103 AP4M1O00189 453 aa11.5□□□□□ -0.57
SMARCD3-207ENST00000472103 KCNAB3O43448 404 aa11.5□□□□□ -0.57
SMARCD3-207ENST00000472103 CNIH1O95406 144 aa11.5□□□□□ -0.57
SMARCD3-207ENST00000472103 PTTG1O95997 202 aa11.5□□□□□ -0.57
SMARCD3-207ENST00000472103 IGF1P05019 195 aa11.5□□□□□ -0.57
SMARCD3-207ENST00000472103 HLA-GP17693 338 aa11.5□□□□□ -0.57
SMARCD3-207ENST00000472103 COMPP49747 757 aaPredicted RBP11.5□□□□□ -0.57
SMARCD3-207ENST00000472103 CFHR3Q02985 330 aa11.5□□□□□ -0.57
SMARCD3-207ENST00000472103 ECSCRQ19T08 205 aa11.5□□□□□ -0.57
SMARCD3-207ENST00000472103 ZNF329Q86UD4 541 aa11.5□□□□□ -0.57
SMARCD3-207ENST00000472103 FOXRED2Q8IWF2 684 aa11.5□□□□□ -0.57
SMARCD3-207ENST00000472103 LRTM2Q8N967 370 aa11.5□□□□□ -0.57
SMARCD3-207ENST00000472103 LFNGQ8NES3 379 aa11.5□□□□□ -0.57
SMARCD3-207ENST00000472103 SGMS2Q8NHU3 365 aa11.5□□□□□ -0.57
SMARCD3-207ENST00000472103 ABHD5Q8WTS1 349 aa11.5□□□□□ -0.57
SMARCD3-207ENST00000472103 QTRT1Q9BXR0 403 aaKnown RBP11.5□□□□□ -0.57
SMARCD3-207ENST00000472103 A0A0B4J2A0 478 aa11.49□□□□□ -0.57
SMARCD3-207ENST00000472103 TEX50A0A1B0GTY4 177 aa11.49□□□□□ -0.57
SMARCD3-207ENST00000472103 MSGN1A6NI15 193 aa11.49□□□□□ -0.57
SMARCD3-207ENST00000472103 C15orf61A6NNL5 157 aa11.49□□□□□ -0.57
SMARCD3-207ENST00000472103 TEX22C9J3V5 150 aa11.49□□□□□ -0.57
SMARCD3-207ENST00000472103 SOX15O60248 233 aa11.49□□□□□ -0.57
SMARCD3-207ENST00000472103 ADAP1O75689 374 aa11.49□□□□□ -0.57
SMARCD3-207ENST00000472103 DUS4LO95620 317 aaKnown RBP11.49□□□□□ -0.57
SMARCD3-207ENST00000472103 IL5P05113 134 aa11.49□□□□□ -0.57
SMARCD3-207ENST00000472103 HOXB5P09067 269 aa11.49□□□□□ -0.57
SMARCD3-207ENST00000472103 PPIFP30405 207 aaKnown RBP11.49□□□□□ -0.57
SMARCD3-207ENST00000472103 RPL27AP46776 148 aaKnown RBP11.49□□□□□ -0.57
SMARCD3-207ENST00000472103 NMSQ5H8A3 153 aa11.49□□□□□ -0.57
SMARCD3-207ENST00000472103 RNASE11Q8TAA1 199 aaKnown RBP11.49□□□□□ -0.57
SMARCD3-207ENST00000472103 ZNF431Q8TF32 576 aaPredicted RBP11.49□□□□□ -0.57
SMARCD3-207ENST00000472103 LSM10Q969L4 123 aaKnown RBP11.49□□□□□ -0.57
SMARCD3-207ENST00000472103 TMEM14BQ9NUH8 114 aa11.49□□□□□ -0.57
SMARCD3-207ENST00000472103 SHPKQ9UHJ6 478 aa11.49□□□□□ -0.57
SMARCD3-207ENST00000472103 ATRQ13535 2644 aa11.48□□□□□ -0.57
SMARCD3-207ENST00000472103 TRAV41A0A0B4J266 112 aa11.48□□□□□ -0.57
SMARCD3-207ENST00000472103 MPTX1A8MV57 137 aa11.48□□□□□ -0.57
SMARCD3-207ENST00000472103 SNAPC5O75971 98 aa11.48□□□□□ -0.57
SMARCD3-207ENST00000472103 MAS1LP35410 378 aa11.48□□□□□ -0.57
SMARCD3-207ENST00000472103 SRPXP78539 464 aa11.48□□□□□ -0.57
SMARCD3-207ENST00000472103 TCTEX1D4Q5JR98 221 aa11.48□□□□□ -0.57
SMARCD3-207ENST00000472103 GGNBP1Q5YKI7 109 aa11.48□□□□□ -0.57
SMARCD3-207ENST00000472103 UNQ5815/PRO19632Q6UWF5 114 aa11.48□□□□□ -0.57
SMARCD3-207ENST00000472103 C19orf35Q6ZS72 473 aa11.48□□□□□ -0.57
SMARCD3-207ENST00000472103 LCNL1Q6ZST4 164 aa11.48□□□□□ -0.57
SMARCD3-207ENST00000472103 MITD1Q8WV92 249 aa11.48□□□□□ -0.57
SMARCD3-207ENST00000472103 WFDC12Q8WWY7 111 aa11.48□□□□□ -0.57
SMARCD3-207ENST00000472103 RRNAD1Q96FB5 475 aaKnown RBP11.48□□□□□ -0.57
SMARCD3-207ENST00000472103 FYTTD1Q96QD9 318 aaKnown RBP11.48□□□□□ -0.57
SMARCD3-207ENST00000472103 CACNG5Q9UF02 275 aa11.48□□□□□ -0.57
SMARCD3-207ENST00000472103 ZNF580Q9UK33 172 aa11.48□□□□□ -0.57
SMARCD3-207ENST00000472103 FOXA2Q9Y261 457 aaPredicted RBP11.48□□□□□ -0.57
SMARCD3-207ENST00000472103 OR51B2Q9Y5P1 312 aa11.48□□□□□ -0.57
SMARCD3-207ENST00000472103 A0A1B0GUS0 222 aa11.47□□□□□ -0.57
SMARCD3-207ENST00000472103 A0A1W2PN81 502 aa11.47□□□□□ -0.57
SMARCD3-207ENST00000472103 PSMB11A5LHX3 300 aa11.47□□□□□ -0.57
SMARCD3-207ENST00000472103 CCSO14618 274 aa11.47□□□□□ -0.57
SMARCD3-207ENST00000472103 ST8SIA3O43173 380 aa11.47□□□□□ -0.57
SMARCD3-207ENST00000472103 CREBL2O60519 120 aaPredicted RBP11.47□□□□□ -0.57
SMARCD3-207ENST00000472103 ACTL6BO94805 426 aa11.47□□□□□ -0.57
SMARCD3-207ENST00000472103 ATG12O94817 140 aa11.47□□□□□ -0.57
SMARCD3-207ENST00000472103 NXPH3O95157 252 aa11.47□□□□□ -0.57
SMARCD3-207ENST00000472103 AREGP15514 252 aa11.47□□□□□ -0.57
SMARCD3-207ENST00000472103 VDAC1P21796 283 aa11.47□□□□□ -0.57
SMARCD3-207ENST00000472103 CHRNA7P36544 502 aa11.47□□□□□ -0.57
SMARCD3-207ENST00000472103 OXA1LQ15070 435 aa11.47□□□□□ -0.57
SMARCD3-207ENST00000472103 RGS21Q2M5E4 152 aa11.47□□□□□ -0.57
SMARCD3-207ENST00000472103 C2orf68Q2NKX9 166 aa11.47□□□□□ -0.57
SMARCD3-207ENST00000472103 KRTAP21-3Q3LHN1 58 aa11.47□□□□□ -0.57
SMARCD3-207ENST00000472103 SPINK9Q5DT21 86 aa11.47□□□□□ -0.57
SMARCD3-207ENST00000472103 C11orf87Q6NUJ2 197 aa11.47□□□□□ -0.57
SMARCD3-207ENST00000472103 CENPVQ7Z7K6 275 aaPredicted RBP11.47□□□□□ -0.57
SMARCD3-207ENST00000472103 FAM219AQ8IW50 185 aa11.47□□□□□ -0.57
SMARCD3-207ENST00000472103 C11orf44Q8N8P7 122 aa11.47□□□□□ -0.57
SMARCD3-207ENST00000472103 MINDY2Q8NBR6 621 aa11.47□□□□□ -0.57
SMARCD3-207ENST00000472103 OR10W1Q8NGF6 305 aa11.47□□□□□ -0.57
SMARCD3-207ENST00000472103 OR4A16Q8NH70 328 aa11.47□□□□□ -0.57
SMARCD3-207ENST00000472103 COQ8AQ8NI60 647 aa11.47□□□□□ -0.57
SMARCD3-207ENST00000472103 CHPT1Q8WUD6 406 aa11.47□□□□□ -0.57
SMARCD3-207ENST00000472103 PHB2Q99623 299 aa11.47□□□□□ -0.57
SMARCD3-207ENST00000472103 PRNDQ9UKY0 176 aa11.47□□□□□ -0.57
SMARCD3-207ENST00000472103 DUXBA0A1W2PPF3 345 aa11.46□□□□□ -0.57
SMARCD3-207ENST00000472103 CD28P10747 220 aa11.46□□□□□ -0.57
SMARCD3-207ENST00000472103 C12orf45Q8N5I9 185 aaPredicted RBP11.46□□□□□ -0.57
SMARCD3-207ENST00000472103 OR5T1Q8NG75 326 aa11.46□□□□□ -0.57
SMARCD3-207ENST00000472103 OR5AU1Q8NGC0 362 aa11.46□□□□□ -0.57
SMARCD3-207ENST00000472103 OR1L8Q8NGR8 309 aa11.46□□□□□ -0.57
SMARCD3-207ENST00000472103 COMMD5Q9GZQ3 224 aa11.46□□□□□ -0.57
SMARCD3-207ENST00000472103 NDUFA4L2Q9NRX3 87 aa11.46□□□□□ -0.57
SMARCD3-207ENST00000472103 IGLC7A0M8Q6 106 aa11.45□□□□□ -0.58
SMARCD3-207ENST00000472103 DHFRP00374 187 aa11.45□□□□□ -0.58
SMARCD3-207ENST00000472103 REG1AP05451 166 aa11.45□□□□□ -0.58
SMARCD3-207ENST00000472103 FGF2P09038 288 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms