RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 A0A1W2PPE3 182 aa8.71□□□□□ -1.02
APLF-204ENST00000471727 C11orf94C9JXX5 98 aa8.71□□□□□ -1.02
APLF-204ENST00000471727 INS-IGF2F8WCM5 200 aa8.71□□□□□ -1.02
APLF-204ENST00000471727 J3QR06 171 aa8.71□□□□□ -1.02
APLF-204ENST00000471727 TNFRSF13BO14836 293 aaPredicted RBP8.71□□□□□ -1.02
APLF-204ENST00000471727 CLN5O75503 358 aa8.71□□□□□ -1.02
APLF-204ENST00000471727 IGHV3-7P01780 117 aa8.71□□□□□ -1.02
APLF-204ENST00000471727 CXCL1P09341 107 aa8.71□□□□□ -1.02
APLF-204ENST00000471727 CD99P14209 185 aa8.71□□□□□ -1.02
APLF-204ENST00000471727 GNG10P50151 68 aa8.71□□□□□ -1.02
APLF-204ENST00000471727 RPS16P62249 146 aaKnown RBP8.71□□□□□ -1.02
APLF-204ENST00000471727 RHOBP62745 196 aa8.71□□□□□ -1.02
APLF-204ENST00000471727 RPL23P62829 140 aaKnown RBP8.71□□□□□ -1.02
APLF-204ENST00000471727 ADIRFQ15847 76 aa8.71□□□□□ -1.02
APLF-204ENST00000471727 TMEM177Q53S58 311 aa8.71□□□□□ -1.02
APLF-204ENST00000471727 C2orf83Q53S99 150 aa8.71□□□□□ -1.02
APLF-204ENST00000471727 NCMAPQ5T1S8 102 aa8.71□□□□□ -1.02
APLF-204ENST00000471727 DUX4L9Q6RFH8 374 aaPredicted RBP8.71□□□□□ -1.02
APLF-204ENST00000471727 TGIF2LYQ8IUE0 185 aa8.71□□□□□ -1.02
APLF-204ENST00000471727 IQCF2Q8IXL9 164 aa8.71□□□□□ -1.02
APLF-204ENST00000471727 VSTM2AQ8TAG5 236 aa8.71□□□□□ -1.02
APLF-204ENST00000471727 RNASE6Q93091 150 aaKnown RBP8.71□□□□□ -1.02
APLF-204ENST00000471727 LEAP2Q969E1 77 aa8.71□□□□□ -1.02
APLF-204ENST00000471727 TMEM186Q96B77 213 aa8.71□□□□□ -1.02
APLF-204ENST00000471727 SNRNP40Q96DI7 357 aaKnown RBP8.71□□□□□ -1.02
APLF-204ENST00000471727 MGST2Q99735 147 aa8.71□□□□□ -1.02
APLF-204ENST00000471727 SSX3Q99909 188 aa8.71□□□□□ -1.02
APLF-204ENST00000471727 C19orf24Q9BVV8 132 aa8.71□□□□□ -1.02
APLF-204ENST00000471727 DOK5Q9P104 306 aa8.71□□□□□ -1.02
APLF-204ENST00000471727 ARL2-SNX15V9GYD0 113 aa8.71□□□□□ -1.02
APLF-204ENST00000471727 B9A039 149 aa8.7□□□□□ -1.02
APLF-204ENST00000471727 PPP1R2P9O14990 202 aa8.7□□□□□ -1.02
APLF-204ENST00000471727 YIF1AO95070 293 aa8.7□□□□□ -1.02
APLF-204ENST00000471727 FSTL3O95633 263 aa8.7□□□□□ -1.02
APLF-204ENST00000471727 CA2P00918 260 aa8.7□□□□□ -1.02
APLF-204ENST00000471727 APOBEC3AP31941 199 aaPredicted RBP8.7□□□□□ -1.02
APLF-204ENST00000471727 UCNP55089 124 aa8.7□□□□□ -1.02
APLF-204ENST00000471727 CASP6P55212 293 aa8.7□□□□□ -1.02
APLF-204ENST00000471727 B2MP61769 119 aa8.7□□□□□ -1.02
APLF-204ENST00000471727 FOXC1Q12948 553 aa8.7□□□□□ -1.02
APLF-204ENST00000471727 EFNB3Q15768 340 aa8.7□□□□□ -1.02
APLF-204ENST00000471727 SSX2Q16385 188 aa8.7□□□□□ -1.02
APLF-204ENST00000471727 ZNF343Q6P1L6 599 aa8.7□□□□□ -1.02
APLF-204ENST00000471727 TMEM144Q7Z5S9 345 aa8.7□□□□□ -1.02
APLF-204ENST00000471727 OR1L8Q8NGR8 309 aa8.7□□□□□ -1.02
APLF-204ENST00000471727 NEUROG1Q92886 237 aa8.7□□□□□ -1.02
APLF-204ENST00000471727 RPUSD4Q96CM3 377 aaKnown RBP8.7□□□□□ -1.02
APLF-204ENST00000471727 SLC35E1Q96K37 410 aa8.7□□□□□ -1.02
APLF-204ENST00000471727 PYGO2Q9BRQ0 406 aa8.7□□□□□ -1.02
APLF-204ENST00000471727 PCGF1Q9BSM1 259 aa8.7□□□□□ -1.02
APLF-204ENST00000471727 URGCP-MRPS24S4R325 110 aa8.7□□□□□ -1.02
APLF-204ENST00000471727 PRR14LQ5THK1 2151 aa8.7□□□□□ -1.02
APLF-204ENST00000471727 ELOA3CA0A087WX78 387 aaPredicted RBP8.69□□□□□ -1.02
APLF-204ENST00000471727 TGIF2-C20orf24A0A0A6YYL0 155 aa8.69□□□□□ -1.02
APLF-204ENST00000471727 A0A1W2PN81 502 aa8.69□□□□□ -1.02
APLF-204ENST00000471727 H7BYZ3 331 aa8.69□□□□□ -1.02
APLF-204ENST00000471727 HMGB3O15347 200 aaKnown RBP8.69□□□□□ -1.02
APLF-204ENST00000471727 USF1P22415 310 aaPredicted RBP8.69□□□□□ -1.02
APLF-204ENST00000471727 IL3RAP26951 378 aa8.69□□□□□ -1.02
APLF-204ENST00000471727 CHRNA7P36544 502 aa8.69□□□□□ -1.02
APLF-204ENST00000471727 SRP14P37108 136 aaKnown RBP8.69□□□□□ -1.02
APLF-204ENST00000471727 CDX1P47902 265 aaPredicted RBP8.69□□□□□ -1.02
APLF-204ENST00000471727 TMEM200BQ69YZ2 307 aa8.69□□□□□ -1.02
APLF-204ENST00000471727 PDPNQ86YL7 162 aa8.69□□□□□ -1.02
APLF-204ENST00000471727 PNKDQ8N490 385 aa8.69□□□□□ -1.02
APLF-204ENST00000471727 OR5AN1Q8NGI8 311 aa8.69□□□□□ -1.02
APLF-204ENST00000471727 TMEM170AQ8WVE7 144 aa8.69□□□□□ -1.02
APLF-204ENST00000471727 CACNG8Q8WXS5 425 aa8.69□□□□□ -1.02
APLF-204ENST00000471727 SRD5A3Q9H8P0 318 aa8.69□□□□□ -1.02
APLF-204ENST00000471727 DYNLRB1Q9NP97 96 aa8.69□□□□□ -1.02
APLF-204ENST00000471727 A0A087X0M5 115 aa8.69□□□□□ -1.02
APLF-204ENST00000471727 TRBV23-1A0A0A0MS06 115 aa8.69□□□□□ -1.02
APLF-204ENST00000471727 TEX50A0A1B0GTY4 177 aa8.69□□□□□ -1.02
APLF-204ENST00000471727 A0A1B0GX30 115 aa8.69□□□□□ -1.02
APLF-204ENST00000471727 ATXN7O15265 892 aaPredicted RBP8.69□□□□□ -1.02
APLF-204ENST00000471727 MMP23AO75900 390 aa8.69□□□□□ -1.02
APLF-204ENST00000471727 PFN1P07737 140 aaKnown RBP8.69□□□□□ -1.02
APLF-204ENST00000471727 CD3EP07766 207 aa8.69□□□□□ -1.02
APLF-204ENST00000471727 MC5RP33032 325 aa8.69□□□□□ -1.02
APLF-204ENST00000471727 GPX4P36969 197 aaPredicted RBP8.69□□□□□ -1.02
APLF-204ENST00000471727 ZNF137PP52743 207 aa8.69□□□□□ -1.02
APLF-204ENST00000471727 ERHP84090 104 aaKnown RBP8.69□□□□□ -1.02
APLF-204ENST00000471727 ARSJQ5FYB0 599 aaPredicted RBP8.69□□□□□ -1.02
APLF-204ENST00000471727 MIC13Q5XKP0 118 aa8.69□□□□□ -1.02
APLF-204ENST00000471727 SPNS3Q6ZMD2 512 aa8.69□□□□□ -1.02
APLF-204ENST00000471727 TNFRSF14Q92956 283 aa8.69□□□□□ -1.02
APLF-204ENST00000471727 FLYWCH2Q96CP2 140 aaKnown RBP8.69□□□□□ -1.02
APLF-204ENST00000471727 WFIKKN1Q96NZ8 548 aa8.69□□□□□ -1.02
APLF-204ENST00000471727 IMMP2LQ96T52 175 aa8.69□□□□□ -1.02
APLF-204ENST00000471727 SHISA9B4DS77 424 aa8.68□□□□□ -1.02
APLF-204ENST00000471727 H0YJW9 148 aa8.68□□□□□ -1.02
APLF-204ENST00000471727 PRR20EP86478 221 aa8.68□□□□□ -1.02
APLF-204ENST00000471727 PRR20CP86479 221 aa8.68□□□□□ -1.02
APLF-204ENST00000471727 PRR20DP86480 221 aa8.68□□□□□ -1.02
APLF-204ENST00000471727 PRR20BP86481 221 aa8.68□□□□□ -1.02
APLF-204ENST00000471727 PRR20AP86496 221 aa8.68□□□□□ -1.02
APLF-204ENST00000471727 FBXL19-AS1Q494R0 122 aa8.68□□□□□ -1.02
APLF-204ENST00000471727 KCNIP4Q6PIL6 250 aa8.68□□□□□ -1.02
APLF-204ENST00000471727 C16orf82Q7Z2V1 217 aa8.68□□□□□ -1.02
APLF-204ENST00000471727 MRPL41Q8IXM3 137 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms