RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 IGKV1-17P01599 117 aa3.45□□□□□ -1.86
SMC5-202ENST00000471372 CYBAP13498 195 aa3.45□□□□□ -1.86
SMC5-202ENST00000471372 S100A7P31151 101 aa3.45□□□□□ -1.86
SMC5-202ENST00000471372 XCL1P47992 114 aa3.45□□□□□ -1.86
SMC5-202ENST00000471372 STX12Q86Y82 276 aa3.45□□□□□ -1.86
SMC5-202ENST00000471372 C11orf68Q9H3H3 251 aaKnown RBP3.45□□□□□ -1.86
SMC5-202ENST00000471372 EFCAB1Q9HAE3 211 aa3.45□□□□□ -1.86
SMC5-202ENST00000471372 ARMC1Q9NVT9 282 aa3.45□□□□□ -1.86
SMC5-202ENST00000471372 ROBO3Q96MS0 1386 aa3.45□□□□□ -1.86
SMC5-202ENST00000471372 IGKV1D-17A0A075B6S4 117 aa3.44□□□□□ -1.86
SMC5-202ENST00000471372 A0A1W2PQD3 144 aa3.44□□□□□ -1.86
SMC5-202ENST00000471372 TXNDC9O14530 226 aa3.44□□□□□ -1.86
SMC5-202ENST00000471372 ZNF189O75820 626 aaPredicted RBP3.44□□□□□ -1.86
SMC5-202ENST00000471372 OR2B3O76000 313 aa3.44□□□□□ -1.86
SMC5-202ENST00000471372 NPYP01303 97 aa3.44□□□□□ -1.86
SMC5-202ENST00000471372 CTSGP08311 255 aa3.44□□□□□ -1.86
SMC5-202ENST00000471372 CSN1S1P47710 185 aa3.44□□□□□ -1.86
SMC5-202ENST00000471372 MCFD2Q8NI22 146 aa3.44□□□□□ -1.86
SMC5-202ENST00000471372 MRPL30Q8TCC3 161 aaKnown RBP3.44□□□□□ -1.86
SMC5-202ENST00000471372 TVP23CQ96ET8 276 aa3.44□□□□□ -1.86
SMC5-202ENST00000471372 KLF6Q99612 283 aaPredicted RBP3.44□□□□□ -1.86
SMC5-202ENST00000471372 KRTAP4-3Q9BYR4 195 aa3.44□□□□□ -1.86
SMC5-202ENST00000471372 COMMD5Q9GZQ3 224 aa3.44□□□□□ -1.86
SMC5-202ENST00000471372 FBXL12Q9NXK8 326 aa3.44□□□□□ -1.86
SMC5-202ENST00000471372 OPTCQ9UBM4 332 aa3.44□□□□□ -1.86
SMC5-202ENST00000471372 CAMSAP1Q5T5Y3 1602 aa3.44□□□□□ -1.86
SMC5-202ENST00000471372 NUP155O75694 1391 aa3.43□□□□□ -1.86
SMC5-202ENST00000471372 A0A0J9YX75 114 aa3.43□□□□□ -1.86
SMC5-202ENST00000471372 E5RI56 91 aa3.43□□□□□ -1.86
SMC5-202ENST00000471372 G3V3Q6 166 aa3.43□□□□□ -1.86
SMC5-202ENST00000471372 FXYD7P58549 80 aa3.43□□□□□ -1.86
SMC5-202ENST00000471372 KRTAP13-3Q3SY46 172 aa3.43□□□□□ -1.86
SMC5-202ENST00000471372 OOSP2Q86WS3 158 aa3.43□□□□□ -1.86
SMC5-202ENST00000471372 CT55Q8WUE5 264 aa3.43□□□□□ -1.86
SMC5-202ENST00000471372 PRRT1Q99946 306 aa3.43□□□□□ -1.86
SMC5-202ENST00000471372 NIPSNAP1Q9BPW8 284 aa3.43□□□□□ -1.86
SMC5-202ENST00000471372 FUT9Q9Y231 359 aa3.43□□□□□ -1.86
SMC5-202ENST00000471372 RBM7Q9Y580 266 aaKnown RBP3.43□□□□□ -1.86
SMC5-202ENST00000471372 ATG2BQ96BY7 2078 aa3.43□□□□□ -1.86
SMC5-202ENST00000471372 REREQ9P2R6 1566 aa3.42□□□□□ -1.86
SMC5-202ENST00000471372 HECW1Q76N89 1606 aa3.42□□□□□ -1.86
SMC5-202ENST00000471372 IGKV1D-43A0A0B4J1Z2 117 aa3.42□□□□□ -1.86
SMC5-202ENST00000471372 C11orf86A6NJI1 115 aa3.42□□□□□ -1.86
SMC5-202ENST00000471372 LEPROTO15243 131 aa3.42□□□□□ -1.86
SMC5-202ENST00000471372 TFPTP0C1Z6 253 aa3.42□□□□□ -1.86
SMC5-202ENST00000471372 ZNF728P0DKX0 622 aa3.42□□□□□ -1.86
SMC5-202ENST00000471372 HBA1P69905 142 aa3.42□□□□□ -1.86
SMC5-202ENST00000471372 RPL19P84098 196 aaKnown RBP3.42□□□□□ -1.86
SMC5-202ENST00000471372 FOXF1Q12946 379 aa3.42□□□□□ -1.86
SMC5-202ENST00000471372 KRR1Q13601 381 aaKnown RBP3.42□□□□□ -1.86
SMC5-202ENST00000471372 TEX36Q5VZQ5 186 aa3.42□□□□□ -1.86
SMC5-202ENST00000471372 GDPD1Q8N9F7 314 aa3.42□□□□□ -1.86
SMC5-202ENST00000471372 GID8Q9NWU2 228 aa3.42□□□□□ -1.86
SMC5-202ENST00000471372 TP73-AS1Q9UF72 201 aa3.42□□□□□ -1.86
SMC5-202ENST00000471372 RSL24D1Q9UHA3 163 aaKnown RBP3.42□□□□□ -1.86
SMC5-202ENST00000471372 TMEM56-RWDD3S4R434 201 aa3.42□□□□□ -1.86
SMC5-202ENST00000471372 EIF3AQ14152 1382 aaKnown RBP3.41□□□□□ -1.86
SMC5-202ENST00000471372 TMEM235A6NFC5 223 aa3.41□□□□□ -1.86
SMC5-202ENST00000471372 CCL5P13501 91 aa3.41□□□□□ -1.86
SMC5-202ENST00000471372 BLVRBP30043 206 aaPredicted RBP3.41□□□□□ -1.86
SMC5-202ENST00000471372 C12orf74Q32Q52 190 aa3.41□□□□□ -1.86
SMC5-202ENST00000471372 C9orf64Q5T6V5 341 aa3.41□□□□□ -1.86
SMC5-202ENST00000471372 LYG2Q86SG7 212 aa3.41□□□□□ -1.86
SMC5-202ENST00000471372 ACOT12Q8WYK0 555 aa3.41□□□□□ -1.86
SMC5-202ENST00000471372 IL36BQ9NZH7 164 aa3.41□□□□□ -1.86
SMC5-202ENST00000471372 ZNF407Q9C0G0 2248 aa3.41□□□□□ -1.86
SMC5-202ENST00000471372 EXOC1LA0A1B0GW35 172 aa3.4□□□□□ -1.87
SMC5-202ENST00000471372 GNRH2O43555 120 aa3.4□□□□□ -1.87
SMC5-202ENST00000471372 SERPINE1P05121 402 aa3.4□□□□□ -1.87
SMC5-202ENST00000471372 BPGMP07738 259 aa3.4□□□□□ -1.87
SMC5-202ENST00000471372 P0C880 135 aa3.4□□□□□ -1.87
SMC5-202ENST00000471372 CD24P25063 80 aa3.4□□□□□ -1.87
SMC5-202ENST00000471372 CA5AP35218 305 aa3.4□□□□□ -1.87
SMC5-202ENST00000471372 CCR2P41597 374 aa3.4□□□□□ -1.87
SMC5-202ENST00000471372 B2MP61769 119 aa3.4□□□□□ -1.87
SMC5-202ENST00000471372 NUP160Q12769 1436 aa3.4□□□□□ -1.87
SMC5-202ENST00000471372 MIAQ16674 131 aa3.4□□□□□ -1.87
SMC5-202ENST00000471372 SLC36A1Q7Z2H8 476 aa3.4□□□□□ -1.87
SMC5-202ENST00000471372 LYPD1Q8N2G4 141 aa3.4□□□□□ -1.87
SMC5-202ENST00000471372 HOPXQ9BPY8 73 aaPredicted RBP3.4□□□□□ -1.87
SMC5-202ENST00000471372 OR8D2Q9GZM6 311 aa3.4□□□□□ -1.87
SMC5-202ENST00000471372 NACADO15069 1562 aa3.39□□□□□ -1.87
SMC5-202ENST00000471372 PIRO00625 290 aa3.39□□□□□ -1.87
SMC5-202ENST00000471372 ZNF682O95780 498 aa3.39□□□□□ -1.87
SMC5-202ENST00000471372 PRM2P04554 102 aa3.39□□□□□ -1.87
SMC5-202ENST00000471372 DEFA3P59666 94 aa3.39□□□□□ -1.87
SMC5-202ENST00000471372 TMED4Q7Z7H5 227 aa3.39□□□□□ -1.87
SMC5-202ENST00000471372 NEK7Q8TDX7 302 aa3.39□□□□□ -1.87
SMC5-202ENST00000471372 SELENOSQ9BQE4 189 aa3.39□□□□□ -1.87
SMC5-202ENST00000471372 ZNF471Q9BX82 626 aaPredicted RBP3.39□□□□□ -1.87
SMC5-202ENST00000471372 ATPIF1Q9UII2 106 aa3.39□□□□□ -1.87
SMC5-202ENST00000471372 FAM215AQ9Y5M1 114 aa3.39□□□□□ -1.87
SMC5-202ENST00000471372 SIPA1L1O43166 1804 aa3.39□□□□□ -1.87
SMC5-202ENST00000471372 RALGAPA2Q2PPJ7 1873 aa3.39□□□□□ -1.87
SMC5-202ENST00000471372 ZSWIM8A7E2V4 1837 aa3.38□□□□□ -1.87
SMC5-202ENST00000471372 TRPM6Q9BX84 2022 aa3.38□□□□□ -1.87
SMC5-202ENST00000471372 hCG_1818297A0A087WSY0 165 aa3.38□□□□□ -1.87
SMC5-202ENST00000471372 DPRXA6NFQ7 191 aa3.38□□□□□ -1.87
SMC5-202ENST00000471372 GGT3PA6NGU5 568 aa3.38□□□□□ -1.87
SMC5-202ENST00000471372 A8MT66 165 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms