RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 BSXQ3C1V8 233 aa7.78□□□□□ -1.16
SF3A1-207ENST00000471342 ZNF562Q6V9R5 426 aa7.78□□□□□ -1.16
SF3A1-207ENST00000471342 ZNF429Q86V71 674 aa7.78□□□□□ -1.16
SF3A1-207ENST00000471342 ZBTB8BQ8NAP8 495 aaPredicted RBP7.78□□□□□ -1.16
SF3A1-207ENST00000471342 OR8H1Q8NGG4 311 aa7.78□□□□□ -1.16
SF3A1-207ENST00000471342 OR5R1Q8NH85 324 aa7.78□□□□□ -1.16
SF3A1-207ENST00000471342 SLC25A33Q9BSK2 321 aa7.78□□□□□ -1.16
SF3A1-207ENST00000471342 WNT10AQ9GZT5 417 aa7.78□□□□□ -1.16
SF3A1-207ENST00000471342 C1RLQ9NZP8 487 aa7.78□□□□□ -1.16
SF3A1-207ENST00000471342 METTL1Q9UBP6 276 aaKnown RBP7.78□□□□□ -1.16
SF3A1-207ENST00000471342 HSPB7Q9UBY9 170 aa7.78□□□□□ -1.16
SF3A1-207ENST00000471342 CACNG5Q9UF02 275 aa7.78□□□□□ -1.16
SF3A1-207ENST00000471342 RCL1Q9Y2P8 373 aaKnown RBP7.78□□□□□ -1.16
SF3A1-207ENST00000471342 TMED3Q9Y3Q3 217 aa7.78□□□□□ -1.16
SF3A1-207ENST00000471342 C2CD3Q4AC94 2353 aa7.77□□□□□ -1.17
SF3A1-207ENST00000471342 A0A1B0GU03 582 aa7.77□□□□□ -1.17
SF3A1-207ENST00000471342 HMX3A6NHT5 357 aa7.77□□□□□ -1.17
SF3A1-207ENST00000471342 PMS2P5A8MQ11 134 aa7.77□□□□□ -1.17
SF3A1-207ENST00000471342 CA2P00918 260 aa7.77□□□□□ -1.17
SF3A1-207ENST00000471342 MBPP02686 304 aaPredicted RBP7.77□□□□□ -1.17
SF3A1-207ENST00000471342 LYL1P12980 280 aa7.77□□□□□ -1.17
SF3A1-207ENST00000471342 COMPP49747 757 aaPredicted RBP7.77□□□□□ -1.17
SF3A1-207ENST00000471342 BCAP31P51572 246 aa7.77□□□□□ -1.17
SF3A1-207ENST00000471342 KRTAP10-3P60369 221 aa7.77□□□□□ -1.17
SF3A1-207ENST00000471342 WT1-ASQ06250 92 aa7.77□□□□□ -1.17
SF3A1-207ENST00000471342 CBX3Q13185 183 aa7.77□□□□□ -1.17
SF3A1-207ENST00000471342 MMDQ15546 238 aa7.77□□□□□ -1.17
SF3A1-207ENST00000471342 C10orf99Q6UWK7 81 aa7.77□□□□□ -1.17
SF3A1-207ENST00000471342 Q6ZSV7 163 aa7.77□□□□□ -1.17
SF3A1-207ENST00000471342 C16orf82Q7Z2V1 217 aa7.77□□□□□ -1.17
SF3A1-207ENST00000471342 ZNF695Q8IW36 515 aa7.77□□□□□ -1.17
SF3A1-207ENST00000471342 TEX29Q8N6K0 151 aa7.77□□□□□ -1.17
SF3A1-207ENST00000471342 OR10W1Q8NGF6 305 aa7.77□□□□□ -1.17
SF3A1-207ENST00000471342 OR4A5Q8NH83 315 aa7.77□□□□□ -1.17
SF3A1-207ENST00000471342 PHB2Q99623 299 aa7.77□□□□□ -1.17
SF3A1-207ENST00000471342 MOB4Q9Y3A3 225 aa7.77□□□□□ -1.17
SF3A1-207ENST00000471342 CMYA5Q8N3K9 4069 aa7.77□□□□□ -1.17
SF3A1-207ENST00000471342 FAM181BA6NEQ2 426 aa7.76□□□□□ -1.17
SF3A1-207ENST00000471342 HRASP01112 189 aa7.76□□□□□ -1.17
SF3A1-207ENST00000471342 IGF1P05019 195 aa7.76□□□□□ -1.17
SF3A1-207ENST00000471342 TRAPPC2P0DI81 140 aa7.76□□□□□ -1.17
SF3A1-207ENST00000471342 TRAPPC2BP0DI82 140 aa7.76□□□□□ -1.17
SF3A1-207ENST00000471342 ARHGDIBP52566 201 aa7.76□□□□□ -1.17
SF3A1-207ENST00000471342 SRPXP78539 464 aa7.76□□□□□ -1.17
SF3A1-207ENST00000471342 HES1Q14469 280 aa7.76□□□□□ -1.17
SF3A1-207ENST00000471342 SMCO1Q147U7 214 aa7.76□□□□□ -1.17
SF3A1-207ENST00000471342 TMEM95Q3KNT9 176 aa7.76□□□□□ -1.17
SF3A1-207ENST00000471342 OR11H4Q8NGC9 324 aa7.76□□□□□ -1.17
SF3A1-207ENST00000471342 OR52E5Q8NH55 327 aa7.76□□□□□ -1.17
SF3A1-207ENST00000471342 COQ8AQ8NI60 647 aa7.76□□□□□ -1.17
SF3A1-207ENST00000471342 ZDHHC16Q969W1 377 aa7.76□□□□□ -1.17
SF3A1-207ENST00000471342 C2orf50Q96LR7 162 aa7.76□□□□□ -1.17
SF3A1-207ENST00000471342 FANCD2OSQ96PS1 177 aa7.76□□□□□ -1.17
SF3A1-207ENST00000471342 FYTTD1Q96QD9 318 aaKnown RBP7.76□□□□□ -1.17
SF3A1-207ENST00000471342 CLCC1Q96S66 551 aa7.76□□□□□ -1.17
SF3A1-207ENST00000471342 TSNAXQ99598 290 aaKnown RBP7.76□□□□□ -1.17
SF3A1-207ENST00000471342 RANBP3Q9H6Z4 567 aaPredicted RBP7.76□□□□□ -1.17
SF3A1-207ENST00000471342 TNFRSF19Q9NS68 423 aa7.76□□□□□ -1.17
SF3A1-207ENST00000471342 ZNF580Q9UK33 172 aa7.76□□□□□ -1.17
SF3A1-207ENST00000471342 ZNF257Q9Y2Q1 563 aa7.76□□□□□ -1.17
SF3A1-207ENST00000471342 ANK2Q01484 3957 aa7.76□□□□□ -1.17
SF3A1-207ENST00000471342 TET2Q6N021 2002 aaPredicted RBP7.76□□□□□ -1.17
SF3A1-207ENST00000471342 PRSS46E5RG02 174 aa7.75□□□□□ -1.17
SF3A1-207ENST00000471342 G3V318 75 aa7.75□□□□□ -1.17
SF3A1-207ENST00000471342 GOSR2O14653 212 aa7.75□□□□□ -1.17
SF3A1-207ENST00000471342 CRYGCP07315 174 aa7.75□□□□□ -1.17
SF3A1-207ENST00000471342 AREGP15514 252 aa7.75□□□□□ -1.17
SF3A1-207ENST00000471342 HNF1AP20823 631 aa7.75□□□□□ -1.17
SF3A1-207ENST00000471342 S100GP29377 79 aa7.75□□□□□ -1.17
SF3A1-207ENST00000471342 HSPE1P61604 102 aaKnown RBP7.75□□□□□ -1.17
SF3A1-207ENST00000471342 RPL8P62917 257 aaKnown RBP7.75□□□□□ -1.17
SF3A1-207ENST00000471342 TNFRSF9Q07011 255 aa7.75□□□□□ -1.17
SF3A1-207ENST00000471342 TCTEX1D4Q5JR98 221 aa7.75□□□□□ -1.17
SF3A1-207ENST00000471342 HAPLN4Q86UW8 402 aa7.75□□□□□ -1.17
SF3A1-207ENST00000471342 FAM103A1Q9BTL3 118 aaKnown RBP7.75□□□□□ -1.17
SF3A1-207ENST00000471342 C16orf95Q9H693 158 aa7.75□□□□□ -1.17
SF3A1-207ENST00000471342 GPN1Q9HCN4 374 aaPredicted RBP7.75□□□□□ -1.17
SF3A1-207ENST00000471342 JMJD1CQ15652 2540 aa7.75□□□□□ -1.17
SF3A1-207ENST00000471342 hCG_2014768A0A024R1R8 64 aa7.74□□□□□ -1.17
SF3A1-207ENST00000471342 MSGN1A6NI15 193 aa7.74□□□□□ -1.17
SF3A1-207ENST00000471342 C15orf62A8K5M9 175 aa7.74□□□□□ -1.17
SF3A1-207ENST00000471342 SMLR1H3BR10 107 aa7.74□□□□□ -1.17
SF3A1-207ENST00000471342 K7EPK0 472 aa7.74□□□□□ -1.17
SF3A1-207ENST00000471342 ATP6V0E1O15342 81 aa7.74□□□□□ -1.17
SF3A1-207ENST00000471342 KCNAB3O43448 404 aa7.74□□□□□ -1.17
SF3A1-207ENST00000471342 OPN1MWP04001 364 aa7.74□□□□□ -1.17
SF3A1-207ENST00000471342 OPN1MW2P0DN77 364 aa7.74□□□□□ -1.17
SF3A1-207ENST00000471342 OPN1MW3P0DN78 364 aa7.74□□□□□ -1.17
SF3A1-207ENST00000471342 ANXA3P12429 323 aa7.74□□□□□ -1.17
SF3A1-207ENST00000471342 CTRB1P17538 263 aa7.74□□□□□ -1.17
SF3A1-207ENST00000471342 POLR2GP62487 172 aaKnown RBP eCLIP7.74□□□□□ -1.17
SF3A1-207ENST00000471342 PRCDQ00LT1 54 aa7.74□□□□□ -1.17
SF3A1-207ENST00000471342 ARL16Q0P5N6 197 aa7.74□□□□□ -1.17
SF3A1-207ENST00000471342 RAB32Q13637 225 aa7.74□□□□□ -1.17
SF3A1-207ENST00000471342 FXYD3Q14802 87 aa7.74□□□□□ -1.17
SF3A1-207ENST00000471342 IAH1Q2TAA2 248 aaPredicted RBP7.74□□□□□ -1.17
SF3A1-207ENST00000471342 SPINK9Q5DT21 86 aa7.74□□□□□ -1.17
SF3A1-207ENST00000471342 CTRB2Q6GPI1 263 aa7.74□□□□□ -1.17
SF3A1-207ENST00000471342 H2BFWTQ7Z2G1 175 aa7.74□□□□□ -1.17
SF3A1-207ENST00000471342 MMD2Q8IY49 270 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms