RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 CD37P11049 281 aa6.52□□□□□ -1.37
XRN1-208ENST00000470537 RPL35AP18077 110 aaKnown RBP6.52□□□□□ -1.37
XRN1-208ENST00000470537 ARL6IP1Q15041 203 aa6.52□□□□□ -1.37
XRN1-208ENST00000470537 KLK9Q2XQG4 91 aa6.52□□□□□ -1.37
XRN1-208ENST00000470537 IGSF11Q5DX21 431 aa6.52□□□□□ -1.37
XRN1-208ENST00000470537 SPSB3Q6PJ21 355 aa6.52□□□□□ -1.37
XRN1-208ENST00000470537 KCTD9Q7L273 389 aa6.52□□□□□ -1.37
XRN1-208ENST00000470537 LRRTM1Q86UE6 522 aa6.52□□□□□ -1.37
XRN1-208ENST00000470537 GVQW1Q8N7I0 195 aa6.52□□□□□ -1.37
XRN1-208ENST00000470537 OR11H2Q8NH07 326 aa6.52□□□□□ -1.37
XRN1-208ENST00000470537 OR4S2Q8NH73 311 aa6.52□□□□□ -1.37
XRN1-208ENST00000470537 OR4A5Q8NH83 315 aa6.52□□□□□ -1.37
XRN1-208ENST00000470537 RAB3CQ96E17 227 aa6.52□□□□□ -1.37
XRN1-208ENST00000470537 CCDC140Q96MF4 163 aa6.52□□□□□ -1.37
XRN1-208ENST00000470537 CMTM3Q96MX0 182 aa6.52□□□□□ -1.37
XRN1-208ENST00000470537 HSD17B10Q99714 261 aaKnown RBP6.52□□□□□ -1.37
XRN1-208ENST00000470537 UBQLN2Q9UHD9 624 aa6.52□□□□□ -1.37
XRN1-208ENST00000470537 KLK9Q9UKQ9 250 aa6.52□□□□□ -1.37
XRN1-208ENST00000470537 RYR1P21817 5038 aa6.51□□□□□ -1.37
XRN1-208ENST00000470537 A0A0A6YYD4 124 aa6.51□□□□□ -1.37
XRN1-208ENST00000470537 LINC00473A8K010 186 aa6.51□□□□□ -1.37
XRN1-208ENST00000470537 K7EMT4 169 aa6.51□□□□□ -1.37
XRN1-208ENST00000470537 DENRO43583 198 aaKnown RBP6.51□□□□□ -1.37
XRN1-208ENST00000470537 ARL6IP5O75915 188 aa6.51□□□□□ -1.37
XRN1-208ENST00000470537 KBTBD11O94819 623 aa6.51□□□□□ -1.37
XRN1-208ENST00000470537 IGHV3-23P01764 117 aa6.51□□□□□ -1.37
XRN1-208ENST00000470537 PLA2G1BP04054 148 aaKnown RBP6.51□□□□□ -1.37
XRN1-208ENST00000470537 CD5P06127 495 aa6.51□□□□□ -1.37
XRN1-208ENST00000470537 CTRB1P17538 263 aa6.51□□□□□ -1.37
XRN1-208ENST00000470537 EDN2P20800 178 aa6.51□□□□□ -1.37
XRN1-208ENST00000470537 PTBP1P26599 531 aaKnown RBP eCLIP6.51□□□□□ -1.37
XRN1-208ENST00000470537 MFAP2P55001 183 aa6.51□□□□□ -1.37
XRN1-208ENST00000470537 TMEM50BP56557 158 aa6.51□□□□□ -1.37
XRN1-208ENST00000470537 NANOS2P60321 138 aaKnown RBP6.51□□□□□ -1.37
XRN1-208ENST00000470537 RPL8P62917 257 aaKnown RBP6.51□□□□□ -1.37
XRN1-208ENST00000470537 PAFAH1B2P68402 229 aa6.51□□□□□ -1.37
XRN1-208ENST00000470537 RAB11BQ15907 218 aa6.51□□□□□ -1.37
XRN1-208ENST00000470537 CTRB2Q6GPI1 263 aa6.51□□□□□ -1.37
XRN1-208ENST00000470537 ZNF645Q8N7E2 425 aa6.51□□□□□ -1.37
XRN1-208ENST00000470537 NANOGP1Q8N7R0 232 aa6.51□□□□□ -1.37
XRN1-208ENST00000470537 TMEM167AQ8TBQ9 72 aa6.51□□□□□ -1.37
XRN1-208ENST00000470537 VN1R17PQ8TDU5 208 aa6.51□□□□□ -1.37
XRN1-208ENST00000470537 CYYR1Q96J86 154 aa6.51□□□□□ -1.37
XRN1-208ENST00000470537 ATP6V0BQ99437 205 aa6.51□□□□□ -1.37
XRN1-208ENST00000470537 SRSF8Q9BRL6 282 aaKnown RBP6.51□□□□□ -1.37
XRN1-208ENST00000470537 HRH4Q9H3N8 390 aa6.51□□□□□ -1.37
XRN1-208ENST00000470537 C8orf4Q9NR00 106 aa6.51□□□□□ -1.37
XRN1-208ENST00000470537 RAB22AQ9UL26 194 aa6.51□□□□□ -1.37
XRN1-208ENST00000470537 SELENOKQ9Y6D0 94 aa6.51□□□□□ -1.37
XRN1-208ENST00000470537 IGLV11-55A0A075B6I3 123 aa6.5□□□□□ -1.37
XRN1-208ENST00000470537 METTL21EPA6NDL7 271 aa6.5□□□□□ -1.37
XRN1-208ENST00000470537 TEX22C9J3V5 150 aa6.5□□□□□ -1.37
XRN1-208ENST00000470537 XRCC3O43542 346 aa6.5□□□□□ -1.37
XRN1-208ENST00000470537 FCGR3AP08637 254 aa6.5□□□□□ -1.37
XRN1-208ENST00000470537 IL6RP08887 468 aaPredicted RBP6.5□□□□□ -1.37
XRN1-208ENST00000470537 UCHL1P09936 223 aa6.5□□□□□ -1.37
XRN1-208ENST00000470537 CRHBPP24387 322 aa6.5□□□□□ -1.37
XRN1-208ENST00000470537 GPR183P32249 361 aa6.5□□□□□ -1.37
XRN1-208ENST00000470537 IRF3Q14653 427 aa6.5□□□□□ -1.37
XRN1-208ENST00000470537 TMEM187Q14656 261 aa6.5□□□□□ -1.37
XRN1-208ENST00000470537 TRAM1Q15629 374 aa6.5□□□□□ -1.37
XRN1-208ENST00000470537 TMEM41BQ5BJD5 291 aa6.5□□□□□ -1.37
XRN1-208ENST00000470537 C10orf55Q5SWW7 151 aa6.5□□□□□ -1.37
XRN1-208ENST00000470537 LIPKQ5VXJ0 399 aa6.5□□□□□ -1.37
XRN1-208ENST00000470537 UNQ9165/PRO28630Q6UXU0 137 aa6.5□□□□□ -1.37
XRN1-208ENST00000470537 HSD17B13Q7Z5P4 300 aaPredicted RBP6.5□□□□□ -1.37
XRN1-208ENST00000470537 OR5B3Q8NH48 314 aa6.5□□□□□ -1.37
XRN1-208ENST00000470537 CD300LFQ8TDQ1 290 aa6.5□□□□□ -1.37
XRN1-208ENST00000470537 BSCL2Q96G97 398 aaPredicted RBP6.5□□□□□ -1.37
XRN1-208ENST00000470537 MND1Q9BWT6 205 aa6.5□□□□□ -1.37
XRN1-208ENST00000470537 ZNF436Q9C0F3 470 aaPredicted RBP6.5□□□□□ -1.37
XRN1-208ENST00000470537 HECTD4Q9Y4D8 3996 aa6.5□□□□□ -1.37
XRN1-208ENST00000470537 KIAA1109Q2LD37 5005 aa6.5□□□□□ -1.37
XRN1-208ENST00000470537 MUC4Q99102 2169 aa6.5□□□□□ -1.37
XRN1-208ENST00000470537 C15orf62A8K5M9 175 aa6.49□□□□□ -1.37
XRN1-208ENST00000470537 FOXI3A8MTJ6 420 aaPredicted RBP6.49□□□□□ -1.37
XRN1-208ENST00000470537 NDUFA4O00483 81 aa6.49□□□□□ -1.37
XRN1-208ENST00000470537 TGOLN2O43493 480 aa6.49□□□□□ -1.37
XRN1-208ENST00000470537 HLA-GP17693 338 aa6.49□□□□□ -1.37
XRN1-208ENST00000470537 PSMA1P25786 263 aaKnown RBP6.49□□□□□ -1.37
XRN1-208ENST00000470537 C2orf76Q3KRA6 126 aa6.49□□□□□ -1.37
XRN1-208ENST00000470537 ODF3L2Q3SX64 289 aa6.49□□□□□ -1.37
XRN1-208ENST00000470537 PLAC9Q5JTB6 97 aa6.49□□□□□ -1.37
XRN1-208ENST00000470537 THOC7Q6I9Y2 204 aaKnown RBP6.49□□□□□ -1.37
XRN1-208ENST00000470537 Q6ZS49 121 aa6.49□□□□□ -1.37
XRN1-208ENST00000470537 H1FOOQ8IZA3 346 aaPredicted RBP6.49□□□□□ -1.37
XRN1-208ENST00000470537 PQLC1Q8N2U9 271 aa6.49□□□□□ -1.37
XRN1-208ENST00000470537 DHRSXQ8N5I4 330 aa6.49□□□□□ -1.37
XRN1-208ENST00000470537 ZNF502Q8TBZ5 544 aa6.49□□□□□ -1.37
XRN1-208ENST00000470537 CYGBQ8WWM9 190 aa6.49□□□□□ -1.37
XRN1-208ENST00000470537 TMEM190Q8WZ59 177 aa6.49□□□□□ -1.37
XRN1-208ENST00000470537 FAM3DQ96BQ1 224 aa6.49□□□□□ -1.37
XRN1-208ENST00000470537 COMMD5Q9GZQ3 224 aa6.49□□□□□ -1.37
XRN1-208ENST00000470537 PLCXD1Q9NUJ7 323 aa6.49□□□□□ -1.37
XRN1-208ENST00000470537 PSORS1C1Q9UIG5 152 aa6.49□□□□□ -1.37
XRN1-208ENST00000470537 APLNQ9ULZ1 77 aa6.49□□□□□ -1.37
XRN1-208ENST00000470537 PLA2G2DQ9UNK4 145 aa6.49□□□□□ -1.37
XRN1-208ENST00000470537 RBMX2Q9Y388 322 aaKnown RBP6.49□□□□□ -1.37
XRN1-208ENST00000470537 OR2W1Q9Y3N9 320 aa6.49□□□□□ -1.37
XRN1-208ENST00000470537 S4R3C0 116 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms