RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 BRD3OSQ6XYD6 125 aa12.12□□□□□ -0.47
COL4A5-203ENST00000470339 C9orf139Q6ZV77 190 aa12.12□□□□□ -0.47
COL4A5-203ENST00000470339 MMD2Q8IY49 270 aa12.12□□□□□ -0.47
COL4A5-203ENST00000470339 SLC25A31Q9H0C2 315 aa12.12□□□□□ -0.47
COL4A5-203ENST00000470339 LYRM2Q9NU23 88 aaPredicted RBP12.12□□□□□ -0.47
COL4A5-203ENST00000470339 OR51B2Q9Y5P1 312 aa12.12□□□□□ -0.47
COL4A5-203ENST00000470339 CSPG4Q6UVK1 2322 aa12.12□□□□□ -0.47
COL4A5-203ENST00000470339 IGHV3OR16-10A0A075B7F0 116 aa12.11□□□□□ -0.47
COL4A5-203ENST00000470339 A0A0U1RQK1 487 aa12.11□□□□□ -0.47
COL4A5-203ENST00000470339 RNF222A6NCQ9 220 aa12.11□□□□□ -0.47
COL4A5-203ENST00000470339 NBR2O15453 112 aa12.11□□□□□ -0.47
COL4A5-203ENST00000470339 TSC22D2O75157 780 aa12.11□□□□□ -0.47
COL4A5-203ENST00000470339 HKR1P10072 659 aa12.11□□□□□ -0.47
COL4A5-203ENST00000470339 RPL12P30050 165 aaKnown RBP12.11□□□□□ -0.47
COL4A5-203ENST00000470339 S100A11P31949 105 aa12.11□□□□□ -0.47
COL4A5-203ENST00000470339 HES1Q14469 280 aa12.11□□□□□ -0.47
COL4A5-203ENST00000470339 PRSS8Q16651 343 aa12.11□□□□□ -0.47
COL4A5-203ENST00000470339 TMUB2Q71RG4 321 aa12.11□□□□□ -0.47
COL4A5-203ENST00000470339 PPP1R27Q86WC6 154 aa12.11□□□□□ -0.47
COL4A5-203ENST00000470339 OR2C3Q8N628 320 aa12.11□□□□□ -0.47
COL4A5-203ENST00000470339 OR1L8Q8NGR8 309 aa12.11□□□□□ -0.47
COL4A5-203ENST00000470339 DTD1Q8TEA8 209 aa12.11□□□□□ -0.47
COL4A5-203ENST00000470339 CLCC1Q96S66 551 aa12.11□□□□□ -0.47
COL4A5-203ENST00000470339 COMMD5Q9GZQ3 224 aa12.11□□□□□ -0.47
COL4A5-203ENST00000470339 ZNF430Q9H8G1 570 aaPredicted RBP12.11□□□□□ -0.47
COL4A5-203ENST00000470339 C1RLQ9NZP8 487 aa12.11□□□□□ -0.47
COL4A5-203ENST00000470339 KIAA1456Q9P272 454 aa12.11□□□□□ -0.47
COL4A5-203ENST00000470339 TCF19Q9Y242 345 aa12.11□□□□□ -0.47
COL4A5-203ENST00000470339 TEX50A0A1B0GTY4 177 aa12.1□□□□□ -0.47
COL4A5-203ENST00000470339 CEBPZOSA8MTT3 80 aa12.1□□□□□ -0.47
COL4A5-203ENST00000470339 INS-IGF2F8WCM5 200 aa12.1□□□□□ -0.47
COL4A5-203ENST00000470339 SMAD7O15105 426 aaKnown RBP12.1□□□□□ -0.47
COL4A5-203ENST00000470339 CD5LO43866 347 aa12.1□□□□□ -0.47
COL4A5-203ENST00000470339 NXPH3O95157 252 aa12.1□□□□□ -0.47
COL4A5-203ENST00000470339 TMEM50AO95807 157 aa12.1□□□□□ -0.47
COL4A5-203ENST00000470339 TMEM11P17152 192 aa12.1□□□□□ -0.47
COL4A5-203ENST00000470339 PAX6P26367 422 aa12.1□□□□□ -0.47
COL4A5-203ENST00000470339 CNTFRP26992 372 aa12.1□□□□□ -0.47
COL4A5-203ENST00000470339 PRCDQ00LT1 54 aa12.1□□□□□ -0.47
COL4A5-203ENST00000470339 MMDQ15546 238 aa12.1□□□□□ -0.47
COL4A5-203ENST00000470339 MRGPRG-AS1Q2M3A8 158 aa12.1□□□□□ -0.47
COL4A5-203ENST00000470339 RBMXL1Q96E39 390 aaKnown RBP12.1□□□□□ -0.47
COL4A5-203ENST00000470339 PLSCR3Q9NRY6 295 aa12.1□□□□□ -0.47
COL4A5-203ENST00000470339 PSENENQ9NZ42 101 aa12.1□□□□□ -0.47
COL4A5-203ENST00000470339 METTL1Q9UBP6 276 aaKnown RBP12.1□□□□□ -0.47
COL4A5-203ENST00000470339 MYO9AB2RTY4 2548 aa12.1□□□□□ -0.47
COL4A5-203ENST00000470339 CELSR1Q9NYQ6 3014 aa12.1□□□□□ -0.47
COL4A5-203ENST00000470339 AKAP9Q99996 3911 aa12.09□□□□□ -0.47
COL4A5-203ENST00000470339 SCAF4O95104 1147 aaKnown RBP12.09□□□□□ -0.47
COL4A5-203ENST00000470339 VDAC2P45880 294 aaPredicted RBP12.09□□□□□ -0.47
COL4A5-203ENST00000470339 F2RL1P55085 397 aa12.09□□□□□ -0.47
COL4A5-203ENST00000470339 ATP5IP56385 69 aaPredicted RBP12.09□□□□□ -0.47
COL4A5-203ENST00000470339 RPP30P78346 268 aaKnown RBP12.09□□□□□ -0.47
COL4A5-203ENST00000470339 BAXQ07812 192 aa12.09□□□□□ -0.47
COL4A5-203ENST00000470339 C5orf64Q2M2E5 130 aa12.09□□□□□ -0.47
COL4A5-203ENST00000470339 LRRC75BQ2VPJ9 315 aa12.09□□□□□ -0.47
COL4A5-203ENST00000470339 ARL6Q9H0F7 186 aa12.09□□□□□ -0.47
COL4A5-203ENST00000470339 HIPK2Q9H2X6 1198 aa12.09□□□□□ -0.47
COL4A5-203ENST00000470339 NDUFA4L2Q9NRX3 87 aa12.09□□□□□ -0.47
COL4A5-203ENST00000470339 MSGN1A6NI15 193 aa12.08□□□□□ -0.48
COL4A5-203ENST00000470339 TAAR5O14804 337 aa12.08□□□□□ -0.48
COL4A5-203ENST00000470339 ACTL6BO94805 426 aa12.08□□□□□ -0.48
COL4A5-203ENST00000470339 IAPPP10997 89 aa12.08□□□□□ -0.48
COL4A5-203ENST00000470339 CD24P25063 80 aa12.08□□□□□ -0.48
COL4A5-203ENST00000470339 CAV2P51636 162 aa12.08□□□□□ -0.48
COL4A5-203ENST00000470339 AP2S1P53680 142 aaPredicted RBP12.08□□□□□ -0.48
COL4A5-203ENST00000470339 HNF4GQ14541 408 aa12.08□□□□□ -0.48
COL4A5-203ENST00000470339 OPCMLQ14982 345 aa12.08□□□□□ -0.48
COL4A5-203ENST00000470339 FAM120AOSQ5T036 256 aa12.08□□□□□ -0.48
COL4A5-203ENST00000470339 TMEM252Q8N6L7 170 aa12.08□□□□□ -0.48
COL4A5-203ENST00000470339 PIFOQ8TCI5 191 aa12.08□□□□□ -0.48
COL4A5-203ENST00000470339 FBXL15Q9H469 300 aa12.08□□□□□ -0.48
COL4A5-203ENST00000470339 ENY2Q9NPA8 101 aa12.08□□□□□ -0.48
COL4A5-203ENST00000470339 ZC4H2Q9NQZ6 224 aa12.08□□□□□ -0.48
COL4A5-203ENST00000470339 ITGB1BP2Q9UKP3 347 aa12.08□□□□□ -0.48
COL4A5-203ENST00000470339 BOLA1Q9Y3E2 137 aa12.08□□□□□ -0.48
COL4A5-203ENST00000470339 PLXNB1O43157 2135 aa12.08□□□□□ -0.48
COL4A5-203ENST00000470339 A0A1W2PN81 502 aa12.07□□□□□ -0.48
COL4A5-203ENST00000470339 KANTRA0A1W2PQU2 76 aa12.07□□□□□ -0.48
COL4A5-203ENST00000470339 FAM24AA6NFZ4 105 aa12.07□□□□□ -0.48
COL4A5-203ENST00000470339 KCNAB3O43448 404 aa12.07□□□□□ -0.48
COL4A5-203ENST00000470339 CHRNA7P36544 502 aa12.07□□□□□ -0.48
COL4A5-203ENST00000470339 COMPP49747 757 aaPredicted RBP12.07□□□□□ -0.48
COL4A5-203ENST00000470339 KRTAP1-1Q07627 177 aa12.07□□□□□ -0.48
COL4A5-203ENST00000470339 PJVKQ0ZLH3 352 aa12.07□□□□□ -0.48
COL4A5-203ENST00000470339 PLGLAQ15195 96 aa12.07□□□□□ -0.48
COL4A5-203ENST00000470339 TMEM14EPQ6UXP3 125 aa12.07□□□□□ -0.48
COL4A5-203ENST00000470339 STX12Q86Y82 276 aa12.07□□□□□ -0.48
COL4A5-203ENST00000470339 MRPL41Q8IXM3 137 aaKnown RBP12.07□□□□□ -0.48
COL4A5-203ENST00000470339 ZDHHC16Q969W1 377 aa12.07□□□□□ -0.48
COL4A5-203ENST00000470339 SSX3Q99909 188 aa12.07□□□□□ -0.48
COL4A5-203ENST00000470339 ARPC5LQ9BPX5 153 aa12.07□□□□□ -0.48
COL4A5-203ENST00000470339 SRSF8Q9BRL6 282 aaKnown RBP12.07□□□□□ -0.48
COL4A5-203ENST00000470339 GON7Q9BXV9 100 aa12.07□□□□□ -0.48
COL4A5-203ENST00000470339 PLEKHA3Q9HB20 300 aa12.07□□□□□ -0.48
COL4A5-203ENST00000470339 HEYLQ9NQ87 328 aaPredicted RBP12.07□□□□□ -0.48
COL4A5-203ENST00000470339 TPSG1Q9NRR2 321 aa12.07□□□□□ -0.48
COL4A5-203ENST00000470339 STRAPQ9Y3F4 350 aaKnown RBP12.07□□□□□ -0.48
COL4A5-203ENST00000470339 U3KQ87 197 aa12.07□□□□□ -0.48
COL4A5-203ENST00000470339 IGSF23A1L1A6 192 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms