RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 ZNF429Q86V71 674 aa8.9□□□□□ -0.98
SREBF1-209ENST00000470247 MMD2Q8IY49 270 aa8.9□□□□□ -0.98
SREBF1-209ENST00000470247 ZBTB8BQ8NAP8 495 aaPredicted RBP8.9□□□□□ -0.98
SREBF1-209ENST00000470247 OR4D5Q8NGN0 318 aa8.9□□□□□ -0.98
SREBF1-209ENST00000470247 RNASE11Q8TAA1 199 aaKnown RBP8.9□□□□□ -0.98
SREBF1-209ENST00000470247 C2orf50Q96LR7 162 aa8.9□□□□□ -0.98
SREBF1-209ENST00000470247 RASL11BQ9BPW5 248 aa8.9□□□□□ -0.98
SREBF1-209ENST00000470247 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.9□□□□□ -0.98
SREBF1-209ENST00000470247 MGAT4CQ9UBM8 478 aa8.9□□□□□ -0.98
SREBF1-209ENST00000470247 FOXA2Q9Y261 457 aaPredicted RBP8.9□□□□□ -0.98
SREBF1-209ENST00000470247 CUBNO60494 3623 aa8.9□□□□□ -0.98
SREBF1-209ENST00000470247 JMJD1CQ15652 2540 aa8.89□□□□□ -0.99
SREBF1-209ENST00000470247 hCG_2014768A0A024R1R8 64 aa8.89□□□□□ -0.99
SREBF1-209ENST00000470247 C13orf42A0A1B0GVH6 325 aa8.89□□□□□ -0.99
SREBF1-209ENST00000470247 C5orf51A6NDU8 294 aa8.89□□□□□ -0.99
SREBF1-209ENST00000470247 FAM181BA6NEQ2 426 aa8.89□□□□□ -0.99
SREBF1-209ENST00000470247 M0QZK8 103 aa8.89□□□□□ -0.99
SREBF1-209ENST00000470247 SNAPC5O75971 98 aa8.89□□□□□ -0.99
SREBF1-209ENST00000470247 MAS1LP35410 378 aa8.89□□□□□ -0.99
SREBF1-209ENST00000470247 COMPP49747 757 aaPredicted RBP8.89□□□□□ -0.99
SREBF1-209ENST00000470247 HSPE1P61604 102 aaKnown RBP8.89□□□□□ -0.99
SREBF1-209ENST00000470247 SRSF2Q01130 221 aaKnown RBP8.89□□□□□ -0.99
SREBF1-209ENST00000470247 ID3Q02535 119 aa8.89□□□□□ -0.99
SREBF1-209ENST00000470247 PLGLAQ15195 96 aa8.89□□□□□ -0.99
SREBF1-209ENST00000470247 IAH1Q2TAA2 248 aaPredicted RBP8.89□□□□□ -0.99
SREBF1-209ENST00000470247 PDLIM3Q53GG5 364 aaPredicted RBP8.89□□□□□ -0.99
SREBF1-209ENST00000470247 GSG1LQ6UXU4 331 aa8.89□□□□□ -0.99
SREBF1-209ENST00000470247 Q8N2B8 174 aa8.89□□□□□ -0.99
SREBF1-209ENST00000470247 OR4A16Q8NH70 328 aa8.89□□□□□ -0.99
SREBF1-209ENST00000470247 TAF15Q92804 592 aaKnown RBP eCLIP8.89□□□□□ -0.99
SREBF1-209ENST00000470247 ZNF702PQ9H963 129 aa8.89□□□□□ -0.99
SREBF1-209ENST00000470247 NDUFA4L2Q9NRX3 87 aa8.89□□□□□ -0.99
SREBF1-209ENST00000470247 PRNDQ9UKY0 176 aa8.89□□□□□ -0.99
SREBF1-209ENST00000470247 FBXO7Q9Y3I1 522 aa8.89□□□□□ -0.99
SREBF1-209ENST00000470247 FAM25EA8MYX2 175 aa8.88□□□□□ -0.99
SREBF1-209ENST00000470247 IGHG2P01859 326 aa8.88□□□□□ -0.99
SREBF1-209ENST00000470247 OPN1MWP04001 364 aa8.88□□□□□ -0.99
SREBF1-209ENST00000470247 OPN1MW2P0DN77 364 aa8.88□□□□□ -0.99
SREBF1-209ENST00000470247 OPN1MW3P0DN78 364 aa8.88□□□□□ -0.99
SREBF1-209ENST00000470247 BCAP31P51572 246 aa8.88□□□□□ -0.99
SREBF1-209ENST00000470247 FXYD3Q14802 87 aa8.88□□□□□ -0.99
SREBF1-209ENST00000470247 TNXAQ16473 311 aa8.88□□□□□ -0.99
SREBF1-209ENST00000470247 OR52E5Q8NH55 327 aa8.88□□□□□ -0.99
SREBF1-209ENST00000470247 FYTTD1Q96QD9 318 aaKnown RBP8.88□□□□□ -0.99
SREBF1-209ENST00000470247 JMJD8Q96S16 334 aa8.88□□□□□ -0.99
SREBF1-209ENST00000470247 SPIN2AQ99865 258 aa8.88□□□□□ -0.99
SREBF1-209ENST00000470247 SPIN2BQ9BPZ2 258 aa8.88□□□□□ -0.99
SREBF1-209ENST00000470247 HSPB7Q9UBY9 170 aa8.88□□□□□ -0.99
SREBF1-209ENST00000470247 ZNF257Q9Y2Q1 563 aa8.88□□□□□ -0.99
SREBF1-209ENST00000470247 OR51B2Q9Y5P1 312 aa8.88□□□□□ -0.99
SREBF1-209ENST00000470247 C2CD3Q4AC94 2353 aa8.88□□□□□ -0.99
SREBF1-209ENST00000470247 TEX22C9J3V5 150 aa8.87□□□□□ -0.99
SREBF1-209ENST00000470247 TCF21O43680 179 aa8.87□□□□□ -0.99
SREBF1-209ENST00000470247 TSPAN9O75954 239 aa8.87□□□□□ -0.99
SREBF1-209ENST00000470247 NXPH3O95157 252 aa8.87□□□□□ -0.99
SREBF1-209ENST00000470247 MBPP02686 304 aaPredicted RBP8.87□□□□□ -0.99
SREBF1-209ENST00000470247 TRAPPC2P0DI81 140 aa8.87□□□□□ -0.99
SREBF1-209ENST00000470247 TRAPPC2BP0DI82 140 aa8.87□□□□□ -0.99
SREBF1-209ENST00000470247 CRIP2P52943 208 aaPredicted RBP8.87□□□□□ -0.99
SREBF1-209ENST00000470247 SPCS3P61009 180 aa8.87□□□□□ -0.99
SREBF1-209ENST00000470247 TNFRSF9Q07011 255 aa8.87□□□□□ -0.99
SREBF1-209ENST00000470247 C19orf54Q5BKX5 351 aa8.87□□□□□ -0.99
SREBF1-209ENST00000470247 ASPHD1Q5U4P2 390 aa8.87□□□□□ -0.99
SREBF1-209ENST00000470247 THOC7Q6I9Y2 204 aaKnown RBP8.87□□□□□ -0.99
SREBF1-209ENST00000470247 C11orf87Q6NUJ2 197 aa8.87□□□□□ -0.99
SREBF1-209ENST00000470247 Q6ZSV7 163 aa8.87□□□□□ -0.99
SREBF1-209ENST00000470247 OR10W1Q8NGF6 305 aa8.87□□□□□ -0.99
SREBF1-209ENST00000470247 OR1L8Q8NGR8 309 aa8.87□□□□□ -0.99
SREBF1-209ENST00000470247 OR5B3Q8NH48 314 aa8.87□□□□□ -0.99
SREBF1-209ENST00000470247 OR1S1Q8NH92 325 aa8.87□□□□□ -0.99
SREBF1-209ENST00000470247 SRSF12Q8WXF0 261 aaKnown RBP8.87□□□□□ -0.99
SREBF1-209ENST00000470247 FAM103A1Q9BTL3 118 aaKnown RBP8.87□□□□□ -0.99
SREBF1-209ENST00000470247 NMES1Q9C002 83 aa8.87□□□□□ -0.99
SREBF1-209ENST00000470247 ZNF436Q9C0F3 470 aaPredicted RBP8.87□□□□□ -0.99
SREBF1-209ENST00000470247 C11orf1Q9H5F2 150 aa8.87□□□□□ -0.99
SREBF1-209ENST00000470247 FKBP11Q9NYL4 201 aa8.87□□□□□ -0.99
SREBF1-209ENST00000470247 GSKIPQ9P0R6 139 aa8.87□□□□□ -0.99
SREBF1-209ENST00000470247 IGLC7A0M8Q6 106 aa8.86□□□□□ -0.99
SREBF1-209ENST00000470247 MSGN1A6NI15 193 aa8.86□□□□□ -0.99
SREBF1-209ENST00000470247 FAM90A26D6RGX4 464 aa8.86□□□□□ -0.99
SREBF1-209ENST00000470247 G3V3Q6 166 aa8.86□□□□□ -0.99
SREBF1-209ENST00000470247 H0YIZ8 118 aa8.86□□□□□ -0.99
SREBF1-209ENST00000470247 TRIM77I1YAP6 450 aa8.86□□□□□ -0.99
SREBF1-209ENST00000470247 ATP6V0E1O15342 81 aa8.86□□□□□ -0.99
SREBF1-209ENST00000470247 RBMXL2O75526 392 aaKnown RBP8.86□□□□□ -0.99
SREBF1-209ENST00000470247 NKX2-1P43699 371 aaPredicted RBP8.86□□□□□ -0.99
SREBF1-209ENST00000470247 VDAC2P45880 294 aaPredicted RBP8.86□□□□□ -0.99
SREBF1-209ENST00000470247 RPL27AP46776 148 aaKnown RBP8.86□□□□□ -0.99
SREBF1-209ENST00000470247 RPL15P61313 204 aaKnown RBP8.86□□□□□ -0.99
SREBF1-209ENST00000470247 GNB1P62873 340 aa8.86□□□□□ -0.99
SREBF1-209ENST00000470247 PRCDQ00LT1 54 aa8.86□□□□□ -0.99
SREBF1-209ENST00000470247 Q5BKY6 102 aa8.86□□□□□ -0.99
SREBF1-209ENST00000470247 SPINK9Q5DT21 86 aa8.86□□□□□ -0.99
SREBF1-209ENST00000470247 C9orf152Q5JTZ5 239 aa8.86□□□□□ -0.99
SREBF1-209ENST00000470247 SGMS2Q8NHU3 365 aa8.86□□□□□ -0.99
SREBF1-209ENST00000470247 ARPC1AQ92747 370 aa8.86□□□□□ -0.99
SREBF1-209ENST00000470247 ST6GAL2Q96JF0 529 aa8.86□□□□□ -0.99
SREBF1-209ENST00000470247 RNF126Q9BV68 326 aa8.86□□□□□ -0.99
SREBF1-209ENST00000470247 PRSS22Q9GZN4 317 aa8.86□□□□□ -0.99
SREBF1-209ENST00000470247 COMMD5Q9GZQ3 224 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms