RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 NINQ8N4C6 2090 aa5.95□□□□□ -1.46
CD46-212ENST00000469535 FOXB2Q5VYV0 432 aa5.95□□□□□ -1.46
CD46-212ENST00000469535 VN1R17PQ8TDU5 208 aa5.95□□□□□ -1.46
CD46-212ENST00000469535 COL5A3P25940 1745 aaPredicted RBP5.95□□□□□ -1.46
CD46-212ENST00000469535 NBR2O15453 112 aa5.95□□□□□ -1.46
CD46-212ENST00000469535 LHX2P50458 406 aa5.95□□□□□ -1.46
CD46-212ENST00000469535 RPS11P62280 158 aaKnown RBP eCLIP5.95□□□□□ -1.46
CD46-212ENST00000469535 NCMAPQ5T1S8 102 aa5.95□□□□□ -1.46
CD46-212ENST00000469535 WDR82Q6UXN9 313 aa5.95□□□□□ -1.46
CD46-212ENST00000469535 OR5AN1Q8NGI8 311 aa5.95□□□□□ -1.46
CD46-212ENST00000469535 NABP2Q9BQ15 211 aa5.95□□□□□ -1.46
CD46-212ENST00000469535 SIPA1L3O60292 1781 aaPredicted RBP5.95□□□□□ -1.46
CD46-212ENST00000469535 FBLL1A6NHQ2 334 aaKnown RBP5.95□□□□□ -1.46
CD46-212ENST00000469535 C10orf128Q5T292 105 aa5.95□□□□□ -1.46
CD46-212ENST00000469535 FAM71F2Q6NXP2 309 aa5.95□□□□□ -1.46
CD46-212ENST00000469535 C1QL2Q7Z5L3 287 aa5.95□□□□□ -1.46
CD46-212ENST00000469535 OR5AC2Q9NZP5 309 aa5.95□□□□□ -1.46
CD46-212ENST00000469535 ASXL3Q9C0F0 2248 aa5.95□□□□□ -1.46
CD46-212ENST00000469535 IGKV1D-42A0A075B6H8 117 aa5.95□□□□□ -1.46
CD46-212ENST00000469535 KBTBD11-OT1A0A1B0GTJ5 212 aa5.95□□□□□ -1.46
CD46-212ENST00000469535 RNF223E7ERA6 249 aa5.95□□□□□ -1.46
CD46-212ENST00000469535 LIMS1P48059 325 aa5.95□□□□□ -1.46
CD46-212ENST00000469535 RAG2P55895 527 aa5.95□□□□□ -1.46
CD46-212ENST00000469535 FOXF2Q12947 444 aa5.95□□□□□ -1.46
CD46-212ENST00000469535 VMO1Q7Z5L0 202 aa5.95□□□□□ -1.46
CD46-212ENST00000469535 COPS9Q8WXC6 57 aa5.95□□□□□ -1.46
CD46-212ENST00000469535 A6NDN8 102 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 HMSDA8MTL9 139 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 CD7P09564 240 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 TAF15Q92804 592 aaKnown RBP eCLIP5.94□□□□□ -1.46
CD46-212ENST00000469535 WFDC6Q9BQY6 131 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 TMEM238LA0A1B0GVL6 79 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 PINLYPA6NC86 204 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 A6NJY4 79 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 C1QTNF9BB2RNN3 333 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 RRHO14718 337 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 C1QTNF9P0C862 333 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 STAG3L2P0CL84 134 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 OTX1P32242 354 aaPredicted RBP5.94□□□□□ -1.46
CD46-212ENST00000469535 KLRD1Q13241 179 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 TMEM170BQ5T4T1 132 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 TMEM42Q69YG0 159 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 TMEM252Q8N6L7 170 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 C11orf68Q9H3H3 251 aaKnown RBP5.94□□□□□ -1.46
CD46-212ENST00000469535 ELF5Q9UKW6 265 aaPredicted RBP5.94□□□□□ -1.46
CD46-212ENST00000469535 CXCL3P19876 107 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 C20orf204Q6ZNR8 217 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 HIST1H4GQ99525 98 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 HLA-DRB1P01911 266 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 EFNA4P52798 201 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 MDC1Q14676 2089 aaKnown RBP5.94□□□□□ -1.46
CD46-212ENST00000469535 ELOA3CA0A087WX78 387 aaPredicted RBP5.94□□□□□ -1.46
CD46-212ENST00000469535 IGHV1-18A0A0C4DH31 117 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 DIRC3C9JPN6 131 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 GGCTO75223 188 aaKnown RBP5.94□□□□□ -1.46
CD46-212ENST00000469535 Q0VFX4 171 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 SAMD13Q5VXD3 122 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 MRPL14Q6P1L8 145 aaKnown RBP5.94□□□□□ -1.46
CD46-212ENST00000469535 OR4D5Q8NGN0 318 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 IMMP1LQ96LU5 166 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 Q96M66 194 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 MIXL1Q9H2W2 232 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 G6PC2Q9NQR9 355 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 TNFSF18Q9UNG2 199 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 LINC00312Q9Y6C7 94 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 TAF1LQ8IZX4 1826 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 PRR32B1ATL7 298 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 B4DEV8 164 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 C12orf77C9JDV5 145 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 IGHMP01871 453 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 EIF4EBP2Q13542 120 aaPredicted RBP5.94□□□□□ -1.46
CD46-212ENST00000469535 ZNF672Q499Z4 452 aaPredicted RBP5.94□□□□□ -1.46
CD46-212ENST00000469535 POC1AQ8NBT0 407 aa5.94□□□□□ -1.46
CD46-212ENST00000469535 F11RQ9Y624 299 aaKnown RBP5.94□□□□□ -1.46
CD46-212ENST00000469535 BCL2P10415 239 aa5.93□□□□□ -1.46
CD46-212ENST00000469535 ZNF25P17030 456 aaPredicted RBP5.93□□□□□ -1.46
CD46-212ENST00000469535 RHOGP84095 191 aa5.93□□□□□ -1.46
CD46-212ENST00000469535 SERF2P84101 59 aa5.93□□□□□ -1.46
CD46-212ENST00000469535 Q96MF0 132 aa5.93□□□□□ -1.46
CD46-212ENST00000469535 TRBV5-3A0A0A0MS03 114 aa5.93□□□□□ -1.46
CD46-212ENST00000469535 TRAV14DV4A0A0A6YYC5 116 aa5.93□□□□□ -1.46
CD46-212ENST00000469535 NPIPB4C9JG80 1138 aa5.93□□□□□ -1.46
CD46-212ENST00000469535 J3QW42 95 aa5.93□□□□□ -1.46
CD46-212ENST00000469535 C1QL1O75973 258 aa5.93□□□□□ -1.46
CD46-212ENST00000469535 DNAL4O96015 105 aa5.93□□□□□ -1.46
CD46-212ENST00000469535 LEPP41159 167 aa5.93□□□□□ -1.46
CD46-212ENST00000469535 FAM3BP58499 235 aaPredicted RBP5.93□□□□□ -1.46
CD46-212ENST00000469535 IGLV3-21P80748 117 aaPredicted RBP5.93□□□□□ -1.46
CD46-212ENST00000469535 DTX2Q86UW9 622 aa5.93□□□□□ -1.46
CD46-212ENST00000469535 H1FOOQ8IZA3 346 aaPredicted RBP5.93□□□□□ -1.46
CD46-212ENST00000469535 ZNF837Q96EG3 531 aaPredicted RBP5.93□□□□□ -1.46
CD46-212ENST00000469535 TP53RKQ96S44 253 aa5.93□□□□□ -1.46
CD46-212ENST00000469535 DEPPQ9NTK1 212 aa5.93□□□□□ -1.46
CD46-212ENST00000469535 PAM16Q9Y3D7 125 aa5.93□□□□□ -1.46
CD46-212ENST00000469535 B4DSR2 109 aa5.93□□□□□ -1.46
CD46-212ENST00000469535 NPIPB8E9PQR5 432 aa5.93□□□□□ -1.46
CD46-212ENST00000469535 NPIPB9F8W1W9 429 aa5.93□□□□□ -1.46
CD46-212ENST00000469535 NPIPB7O75200 414 aa5.93□□□□□ -1.46
CD46-212ENST00000469535 F12P00748 615 aaPredicted RBP5.93□□□□□ -1.46
CD46-212ENST00000469535 SAA1P0DJI8 122 aaPredicted RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms