RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 CD300LFQ8TDQ1 290 aa3.34□□□□□ -1.87
VPS8-219ENST00000469479 DNAJC9Q8WXX5 260 aa3.34□□□□□ -1.87
VPS8-219ENST00000469479 GALMQ96C23 342 aa3.34□□□□□ -1.87
VPS8-219ENST00000469479 PELI1Q96FA3 418 aa3.34□□□□□ -1.87
VPS8-219ENST00000469479 RRNAD1Q96FB5 475 aaKnown RBP3.34□□□□□ -1.87
VPS8-219ENST00000469479 CLCC1Q96S66 551 aa3.34□□□□□ -1.87
VPS8-219ENST00000469479 MYCBPQ99417 103 aaPredicted RBP3.34□□□□□ -1.87
VPS8-219ENST00000469479 GPER1Q99527 375 aa3.34□□□□□ -1.87
VPS8-219ENST00000469479 S100A13Q99584 98 aa3.34□□□□□ -1.87
VPS8-219ENST00000469479 SPIN2AQ99865 258 aa3.34□□□□□ -1.87
VPS8-219ENST00000469479 SPIN2BQ9BPZ2 258 aa3.34□□□□□ -1.87
VPS8-219ENST00000469479 SAR1AQ9NR31 198 aa3.34□□□□□ -1.87
VPS8-219ENST00000469479 SMPD3Q9NY59 655 aaPredicted RBP3.34□□□□□ -1.87
VPS8-219ENST00000469479 TAS2R1Q9NYW7 299 aa3.34□□□□□ -1.87
VPS8-219ENST00000469479 SAMHD1Q9Y3Z3 626 aaKnown RBP3.34□□□□□ -1.87
VPS8-219ENST00000469479 IGLV2-18A0A075B6J9 118 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 C15orf61A6NNL5 157 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 DYNC1I1O14576 645 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 OGG1O15527 345 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 GPX5O75715 221 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 MAS1P04201 325 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 CD5P06127 495 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 OR2T7P0C7T2 308 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 GTF2F2P13984 249 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 ANXA7P20073 488 aaKnown RBP3.33□□□□□ -1.88
VPS8-219ENST00000469479 CDK5Q00535 292 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 RELQ04864 619 aaPredicted RBP3.33□□□□□ -1.88
VPS8-219ENST00000469479 RIPK1Q13546 671 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 GPR176Q14439 515 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 C15orf32Q32M92 178 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 PIGYQ3MUY2 71 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 SPATA12Q7Z6I5 190 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 GID4Q8IVV7 300 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 LYPD1Q8N2G4 141 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 PARP16Q8N5Y8 322 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 BBS1Q8NFJ9 593 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 OR10G2Q8NGC3 310 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 OR51A2Q8NGJ7 313 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 OR1L1Q8NH94 360 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 CCDC107Q8WV48 283 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 TNFAIP8L1Q8WVP5 186 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 CACNG8Q8WXS5 425 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 MRPL48Q96GC5 212 aaKnown RBP3.33□□□□□ -1.88
VPS8-219ENST00000469479 LINC00479Q96M42 142 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 FEVQ99581 238 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 TTTY10Q9BZA0 68 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 PARP12Q9H0J9 701 aaKnown RBP3.33□□□□□ -1.88
VPS8-219ENST00000469479 METTL9Q9H1A3 318 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 TAF9BQ9HBM6 251 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 DAZ1Q9NQZ3 744 aaKnown RBP3.33□□□□□ -1.88
VPS8-219ENST00000469479 ABRACLQ9P1F3 81 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 GHRLQ9UBU3 117 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 TMED3Q9Y3Q3 217 aa3.33□□□□□ -1.88
VPS8-219ENST00000469479 FLG2Q5D862 2391 aaPredicted RBP3.33□□□□□ -1.88
VPS8-219ENST00000469479 TRBV7-1A0A0A6YYK4 115 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 CCDC182A6NF36 153 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 CYB5BO43169 146 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 EDF1O60869 148 aaKnown RBP3.32□□□□□ -1.88
VPS8-219ENST00000469479 SC5DO75845 299 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 FAM107AO95990 144 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 CT45A6P0DMU7 189 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 CT45A5P0DMU8 189 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 CT45A7P0DMV0 189 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 SPP1P10451 314 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 HSD17B1P14061 328 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 HIST1H1BP16401 226 aaKnown RBP3.32□□□□□ -1.88
VPS8-219ENST00000469479 RAB3AP20336 220 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 PPP1CCP36873 323 aaKnown RBP3.32□□□□□ -1.88
VPS8-219ENST00000469479 MED21Q13503 144 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 TPBGQ13641 420 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 FAM98BQ52LJ0 330 aaKnown RBP3.32□□□□□ -1.88
VPS8-219ENST00000469479 TTC32Q5I0X7 151 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 NXNL2Q5VZ03 156 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 DMKNQ6E0U4 476 aaPredicted RBP3.32□□□□□ -1.88
VPS8-219ENST00000469479 OR2T5Q6IEZ7 315 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 NOTCH2NLQ7Z3S9 236 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 C15orf53Q8NAA6 179 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.32□□□□□ -1.88
VPS8-219ENST00000469479 OR2G2Q8NGZ5 317 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 OR2T29Q8NH02 315 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 OR5B3Q8NH48 314 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 GIPC3Q8TF64 312 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 EEF1AKMT3Q96AZ1 226 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 CXorf58Q96LI9 332 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 HARBI1Q96MB7 349 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 NIPSNAP1Q9BPW8 284 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 FAM192AQ9GZU8 254 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 IFI27L2Q9H2X8 130 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 MAGIXQ9H6Y5 334 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 ADGRL4Q9HBW9 690 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 WARS2Q9UGM6 360 aaKnown RBP3.32□□□□□ -1.88
VPS8-219ENST00000469479 UBQLN2Q9UHD9 624 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 ZNF257Q9Y2Q1 563 aa3.32□□□□□ -1.88
VPS8-219ENST00000469479 NBDYA0A0U1RRE5 68 aa3.31□□□□□ -1.88
VPS8-219ENST00000469479 NDUFAF8A1L188 74 aa3.31□□□□□ -1.88
VPS8-219ENST00000469479 TMEM189A5PLL7 270 aa3.31□□□□□ -1.88
VPS8-219ENST00000469479 PPP5D1E7EU14 171 aa3.31□□□□□ -1.88
VPS8-219ENST00000469479 GABRPO00591 440 aa3.31□□□□□ -1.88
VPS8-219ENST00000469479 VCYO14598 125 aa3.31□□□□□ -1.88
VPS8-219ENST00000469479 GEMIN2O14893 280 aaKnown RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms