RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 C15orf62A8K5M9 175 aa7.58□□□□□ -1.2
SMC1A-205ENST00000469129 MPDU1O75352 247 aa7.58□□□□□ -1.2
SMC1A-205ENST00000469129 IGKV1-16P04430 117 aa7.58□□□□□ -1.2
SMC1A-205ENST00000469129 PRTN3P24158 256 aa7.58□□□□□ -1.2
SMC1A-205ENST00000469129 COX7A1P24310 79 aa7.58□□□□□ -1.2
SMC1A-205ENST00000469129 NPY1RP25929 384 aa7.58□□□□□ -1.2
SMC1A-205ENST00000469129 CHRNA7P36544 502 aa7.58□□□□□ -1.2
SMC1A-205ENST00000469129 RPS16P62249 146 aaKnown RBP7.58□□□□□ -1.2
SMC1A-205ENST00000469129 RPL8P62917 257 aaKnown RBP7.58□□□□□ -1.2
SMC1A-205ENST00000469129 DLK1P80370 383 aa7.58□□□□□ -1.2
SMC1A-205ENST00000469129 RUNX1Q01196 453 aa7.58□□□□□ -1.2
SMC1A-205ENST00000469129 VWC2Q2TAL6 325 aa7.58□□□□□ -1.2
SMC1A-205ENST00000469129 SPINK9Q5DT21 86 aa7.58□□□□□ -1.2
SMC1A-205ENST00000469129 BTNL8Q6UX41 500 aa7.58□□□□□ -1.2
SMC1A-205ENST00000469129 THNSL2Q86YJ6 484 aa7.58□□□□□ -1.2
SMC1A-205ENST00000469129 PNKDQ8N490 385 aa7.58□□□□□ -1.2
SMC1A-205ENST00000469129 ZNF709Q8N972 641 aa7.58□□□□□ -1.2
SMC1A-205ENST00000469129 SLC24A4Q8NFF2 622 aa7.58□□□□□ -1.2
SMC1A-205ENST00000469129 OR11H6Q8NGC7 330 aa7.58□□□□□ -1.2
SMC1A-205ENST00000469129 OR4P4Q8NGL7 312 aa7.58□□□□□ -1.2
SMC1A-205ENST00000469129 OR1L8Q8NGR8 309 aa7.58□□□□□ -1.2
SMC1A-205ENST00000469129 LYPD6BQ8NI32 183 aa7.58□□□□□ -1.2
SMC1A-205ENST00000469129 FAM213BQ8TBF2 198 aa7.58□□□□□ -1.2
SMC1A-205ENST00000469129 IGFBPL1Q8WX77 278 aa7.58□□□□□ -1.2
SMC1A-205ENST00000469129 TAF15Q92804 592 aaKnown RBP eCLIP7.58□□□□□ -1.2
SMC1A-205ENST00000469129 RNF5Q99942 180 aa7.58□□□□□ -1.2
SMC1A-205ENST00000469129 PBDC1Q9BVG4 233 aa7.58□□□□□ -1.2
SMC1A-205ENST00000469129 HRH4Q9H3N8 390 aa7.58□□□□□ -1.2
SMC1A-205ENST00000469129 UNKLQ9H9P5 680 aaKnown RBP7.58□□□□□ -1.2
SMC1A-205ENST00000469129 MALRD1Q5VYJ5 2156 aa7.58□□□□□ -1.2
SMC1A-205ENST00000469129 HRNRQ86YZ3 2850 aaPredicted RBP7.57□□□□□ -1.2
SMC1A-205ENST00000469129 IGHV1-3A0A0C4DH29 117 aa7.57□□□□□ -1.2
SMC1A-205ENST00000469129 IGHV2-70DA0A0C4DH43 119 aa7.57□□□□□ -1.2
SMC1A-205ENST00000469129 PMS2P5A8MQ11 134 aa7.57□□□□□ -1.2
SMC1A-205ENST00000469129 OOSP1A8MZH6 123 aa7.57□□□□□ -1.2
SMC1A-205ENST00000469129 FNDC10F2Z333 226 aa7.57□□□□□ -1.2
SMC1A-205ENST00000469129 INS-IGF2F8WCM5 200 aa7.57□□□□□ -1.2
SMC1A-205ENST00000469129 FOXH1O75593 365 aa7.57□□□□□ -1.2
SMC1A-205ENST00000469129 MBP02144 154 aa7.57□□□□□ -1.2
SMC1A-205ENST00000469129 COX6B1P14854 86 aa7.57□□□□□ -1.2
SMC1A-205ENST00000469129 FGF7P21781 194 aa7.57□□□□□ -1.2
SMC1A-205ENST00000469129 HTR1DP28221 377 aa7.57□□□□□ -1.2
SMC1A-205ENST00000469129 MAS1LP35410 378 aa7.57□□□□□ -1.2
SMC1A-205ENST00000469129 ARL16Q0P5N6 197 aa7.57□□□□□ -1.2
SMC1A-205ENST00000469129 TPTE2P1Q5T6R2 138 aa7.57□□□□□ -1.2
SMC1A-205ENST00000469129 CCDC144NLQ6NUI1 221 aa7.57□□□□□ -1.2
SMC1A-205ENST00000469129 ETV3LQ6ZN32 361 aa7.57□□□□□ -1.2
SMC1A-205ENST00000469129 MMD2Q8IY49 270 aa7.57□□□□□ -1.2
SMC1A-205ENST00000469129 TEX45Q8NA69 505 aa7.57□□□□□ -1.2
SMC1A-205ENST00000469129 NARS2Q96I59 477 aaKnown RBP7.57□□□□□ -1.2
SMC1A-205ENST00000469129 FBXO7Q9Y3I1 522 aa7.57□□□□□ -1.2
SMC1A-205ENST00000469129 INSIG2Q9Y5U4 225 aa7.57□□□□□ -1.2
SMC1A-205ENST00000469129 SETXQ7Z333 2677 aaKnown RBP7.57□□□□□ -1.2
SMC1A-205ENST00000469129 ODF3BA8MYP8 253 aa7.56□□□□□ -1.2
SMC1A-205ENST00000469129 NDUFS7O75251 213 aa7.56□□□□□ -1.2
SMC1A-205ENST00000469129 TSPAN9O75954 239 aa7.56□□□□□ -1.2
SMC1A-205ENST00000469129 IGHV4-39P01824 125 aa7.56□□□□□ -1.2
SMC1A-205ENST00000469129 IFNA4P05014 189 aa7.56□□□□□ -1.2
SMC1A-205ENST00000469129 H2AFB1P0C5Y9 115 aa7.56□□□□□ -1.2
SMC1A-205ENST00000469129 DVL1P1P54792 670 aaPredicted RBP7.56□□□□□ -1.2
SMC1A-205ENST00000469129 ARF6P62330 175 aa7.56□□□□□ -1.2
SMC1A-205ENST00000469129 TMEM41BQ5BJD5 291 aa7.56□□□□□ -1.2
SMC1A-205ENST00000469129 MINOS1Q5TGZ0 78 aa7.56□□□□□ -1.2
SMC1A-205ENST00000469129 CLEC2AQ6UVW9 174 aa7.56□□□□□ -1.2
SMC1A-205ENST00000469129 MOB3BQ86TA1 216 aa7.56□□□□□ -1.2
SMC1A-205ENST00000469129 Q8N7P7 452 aa7.56□□□□□ -1.2
SMC1A-205ENST00000469129 CLDND2Q8NHS1 167 aa7.56□□□□□ -1.2
SMC1A-205ENST00000469129 FAM168AQ92567 244 aa7.56□□□□□ -1.2
SMC1A-205ENST00000469129 RBMXL1Q96E39 390 aaKnown RBP7.56□□□□□ -1.2
SMC1A-205ENST00000469129 HINT2Q9BX68 163 aa7.56□□□□□ -1.2
SMC1A-205ENST00000469129 BPESC1Q9GZL8 116 aa7.56□□□□□ -1.2
SMC1A-205ENST00000469129 SMDT1Q9H4I9 107 aa7.56□□□□□ -1.2
SMC1A-205ENST00000469129 TREM1Q9NP99 234 aa7.56□□□□□ -1.2
SMC1A-205ENST00000469129 SIRT7Q9NRC8 400 aa7.56□□□□□ -1.2
SMC1A-205ENST00000469129 DPM3Q9P2X0 92 aa7.56□□□□□ -1.2
SMC1A-205ENST00000469129 TBL2Q9Y4P3 447 aaKnown RBP7.56□□□□□ -1.2
SMC1A-205ENST00000469129 MINOS1-NBL1R4GNA1 71 aa7.56□□□□□ -1.2
SMC1A-205ENST00000469129 TEX50A0A1B0GTY4 177 aa7.55□□□□□ -1.2
SMC1A-205ENST00000469129 A0A1W2PPI3 338 aa7.55□□□□□ -1.2
SMC1A-205ENST00000469129 SMCO3A2RU48 225 aa7.55□□□□□ -1.2
SMC1A-205ENST00000469129 SRRM4A7MD48 611 aaKnown RBP7.55□□□□□ -1.2
SMC1A-205ENST00000469129 LY6LH3BQJ8 138 aa7.55□□□□□ -1.2
SMC1A-205ENST00000469129 IGLV2-23P01705 113 aa7.55□□□□□ -1.2
SMC1A-205ENST00000469129 CD1BP29016 333 aa7.55□□□□□ -1.2
SMC1A-205ENST00000469129 SNCAP37840 140 aa7.55□□□□□ -1.2
SMC1A-205ENST00000469129 SUB1P53999 127 aaKnown RBP eCLIP7.55□□□□□ -1.2
SMC1A-205ENST00000469129 DSCR9P59020 149 aa7.55□□□□□ -1.2
SMC1A-205ENST00000469129 ERHP84090 104 aaKnown RBP7.55□□□□□ -1.2
SMC1A-205ENST00000469129 DIAPH2-AS1Q14236 149 aa7.55□□□□□ -1.2
SMC1A-205ENST00000469129 PEA15Q15121 130 aa7.55□□□□□ -1.2
SMC1A-205ENST00000469129 C2orf83Q53S99 150 aa7.55□□□□□ -1.2
SMC1A-205ENST00000469129 HIST2H2BCQ6DN03 193 aa7.55□□□□□ -1.2
SMC1A-205ENST00000469129 VMO1Q7Z5L0 202 aa7.55□□□□□ -1.2
SMC1A-205ENST00000469129 CENPVQ7Z7K6 275 aaPredicted RBP7.55□□□□□ -1.2
SMC1A-205ENST00000469129 LINC00052Q96N35 136 aa7.55□□□□□ -1.2
SMC1A-205ENST00000469129 RSG1Q9BU20 258 aa7.55□□□□□ -1.2
SMC1A-205ENST00000469129 NPCDR1Q9BY65 106 aa7.55□□□□□ -1.2
SMC1A-205ENST00000469129 PLA2G2EQ9NZK7 142 aa7.55□□□□□ -1.2
SMC1A-205ENST00000469129 KIAA1456Q9P272 454 aa7.55□□□□□ -1.2
SMC1A-205ENST00000469129 WDR83OSQ9Y284 106 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms