RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 MFSD2BA6NFX1 497 aa15.82■□□□□ 0.12
COL9A3-207ENST00000467819 CLEC2LP0C7M8 214 aa15.82■□□□□ 0.12
COL9A3-207ENST00000467819 HIST1H1BP16401 226 aaKnown RBP15.82■□□□□ 0.12
COL9A3-207ENST00000467819 HLA-GP17693 338 aa15.82■□□□□ 0.12
COL9A3-207ENST00000467819 SDC2P34741 201 aa15.82■□□□□ 0.12
COL9A3-207ENST00000467819 TIMM50Q3ZCQ8 353 aa15.82■□□□□ 0.12
COL9A3-207ENST00000467819 ZNF57Q68EA5 555 aaPredicted RBP15.82■□□□□ 0.12
COL9A3-207ENST00000467819 OR4A47Q6IF82 309 aa15.82■□□□□ 0.12
COL9A3-207ENST00000467819 SLC16A13Q7RTY0 426 aa15.82■□□□□ 0.12
COL9A3-207ENST00000467819 SPAG16Q8N0X2 631 aa15.82■□□□□ 0.12
COL9A3-207ENST00000467819 OR13F1Q8NGS4 319 aa15.82■□□□□ 0.12
COL9A3-207ENST00000467819 OR5H6Q8NGV6 325 aa15.82■□□□□ 0.12
COL9A3-207ENST00000467819 HRASLSQ9HDD0 168 aa15.82■□□□□ 0.12
COL9A3-207ENST00000467819 MLXQ9UH92 298 aa15.82■□□□□ 0.12
COL9A3-207ENST00000467819 CGB1A6NKQ9 187 aa15.81■□□□□ 0.12
COL9A3-207ENST00000467819 FCER2P06734 321 aa15.81■□□□□ 0.12
COL9A3-207ENST00000467819 UXS1Q8NBZ7 420 aa15.81■□□□□ 0.12
COL9A3-207ENST00000467819 FCGR1BQ92637 280 aa15.81■□□□□ 0.12
COL9A3-207ENST00000467819 SLC25A38Q96DW6 304 aa15.81■□□□□ 0.12
COL9A3-207ENST00000467819 BET1LQ9NYM9 111 aa15.81■□□□□ 0.12
COL9A3-207ENST00000467819 IGLV11-55A0A075B6I3 123 aa15.8■□□□□ 0.12
COL9A3-207ENST00000467819 A8MWP6 167 aa15.8■□□□□ 0.12
COL9A3-207ENST00000467819 SULT1C2O00338 296 aa15.8■□□□□ 0.12
COL9A3-207ENST00000467819 SCAF4O95104 1147 aaKnown RBP15.8■□□□□ 0.12
COL9A3-207ENST00000467819 PPYP01298 95 aa15.8■□□□□ 0.12
COL9A3-207ENST00000467819 FXYD4P59646 89 aa15.8■□□□□ 0.12
COL9A3-207ENST00000467819 BTNL8Q6UX41 500 aa15.8■□□□□ 0.12
COL9A3-207ENST00000467819 OR52B4Q8NGK2 314 aa15.8■□□□□ 0.12
COL9A3-207ENST00000467819 OR4A5Q8NH83 315 aa15.8■□□□□ 0.12
COL9A3-207ENST00000467819 SLC5A7Q9GZV3 580 aa15.8■□□□□ 0.12
COL9A3-207ENST00000467819 RNF167Q9H6Y7 350 aa15.8■□□□□ 0.12
COL9A3-207ENST00000467819 TRBV7-1A0A0A6YYK4 115 aa15.79■□□□□ 0.12
COL9A3-207ENST00000467819 OR2B8PP59922 312 aa15.79■□□□□ 0.12
COL9A3-207ENST00000467819 MSMO1Q15800 293 aa15.79■□□□□ 0.12
COL9A3-207ENST00000467819 KLK9Q2XQG4 91 aa15.79■□□□□ 0.12
COL9A3-207ENST00000467819 TM4SF20Q53R12 229 aa15.79■□□□□ 0.12
COL9A3-207ENST00000467819 IDNKQ5T6J7 187 aa15.79■□□□□ 0.12
COL9A3-207ENST00000467819 HOGA1Q86XE5 327 aa15.79■□□□□ 0.12
COL9A3-207ENST00000467819 CXorf58Q96LI9 332 aa15.79■□□□□ 0.12
COL9A3-207ENST00000467819 AIFM2Q9BRQ8 373 aa15.79■□□□□ 0.12
COL9A3-207ENST00000467819 KLK9Q9UKQ9 250 aa15.79■□□□□ 0.12
COL9A3-207ENST00000467819 TRAV3A0A0B4J244 114 aa15.78■□□□□ 0.12
COL9A3-207ENST00000467819 IGHV3-35A0A0C4DH35 117 aa15.78■□□□□ 0.12
COL9A3-207ENST00000467819 CLEC3BP05452 202 aa15.78■□□□□ 0.12
COL9A3-207ENST00000467819 GPR183P32249 361 aa15.78■□□□□ 0.12
COL9A3-207ENST00000467819 CATR1Q13166 79 aa15.78■□□□□ 0.12
COL9A3-207ENST00000467819 UNQ9165/PRO28630Q6UXU0 137 aa15.78■□□□□ 0.12
COL9A3-207ENST00000467819 ZBTB34Q8NCN2 500 aa15.78■□□□□ 0.12
COL9A3-207ENST00000467819 ETV7Q9Y603 341 aa15.78■□□□□ 0.12
COL9A3-207ENST00000467819 LOC100506127A0A0U1RQW1 187 aa15.77■□□□□ 0.12
COL9A3-207ENST00000467819 IGLC7A0M8Q6 106 aa15.77■□□□□ 0.12
COL9A3-207ENST00000467819 RBFOX2O43251 390 aaKnown RBP eCLIP15.77■□□□□ 0.12
COL9A3-207ENST00000467819 TAS2R31P59538 309 aa15.77■□□□□ 0.12
COL9A3-207ENST00000467819 ZNF773Q6PK81 442 aa15.77■□□□□ 0.12
COL9A3-207ENST00000467819 TMEM17Q86X19 198 aa15.77■□□□□ 0.12
COL9A3-207ENST00000467819 OR51H1Q8NH63 302 aa15.77■□□□□ 0.12
COL9A3-207ENST00000467819 MEIS3P1A6NDR6 274 aa15.76■□□□□ 0.11
COL9A3-207ENST00000467819 UPK2O00526 184 aa15.76■□□□□ 0.11
COL9A3-207ENST00000467819 HPRT1P00492 218 aa15.76■□□□□ 0.11
COL9A3-207ENST00000467819 RPA2P15927 270 aa15.76■□□□□ 0.11
COL9A3-207ENST00000467819 NQO2P16083 231 aa15.76■□□□□ 0.11
COL9A3-207ENST00000467819 SCAND1P57086 179 aa15.76■□□□□ 0.11
COL9A3-207ENST00000467819 ZNF585BQ52M93 769 aa15.76■□□□□ 0.11
COL9A3-207ENST00000467819 ZNF818PQ6ZRF7 136 aa15.76■□□□□ 0.11
COL9A3-207ENST00000467819 ZNF502Q8TBZ5 544 aa15.76■□□□□ 0.11
COL9A3-207ENST00000467819 GGTLC1Q9BX51 225 aa15.76■□□□□ 0.11
COL9A3-207ENST00000467819 COMMD5Q9GZQ3 224 aa15.76■□□□□ 0.11
COL9A3-207ENST00000467819 AUNIPQ9H7T9 357 aa15.76■□□□□ 0.11
COL9A3-207ENST00000467819 TMEM140Q9NV12 185 aa15.76■□□□□ 0.11
COL9A3-207ENST00000467819 LOC102724200A0A096LPH7 203 aaPredicted RBP15.75■□□□□ 0.11
COL9A3-207ENST00000467819 S1PR2O95136 353 aa15.75■□□□□ 0.11
COL9A3-207ENST00000467819 ANKRD55Q3KP44 614 aa15.75■□□□□ 0.11
COL9A3-207ENST00000467819 AADACL3Q5VUY0 350 aa15.75■□□□□ 0.11
COL9A3-207ENST00000467819 PLET1Q6UQ28 207 aa15.75■□□□□ 0.11
COL9A3-207ENST00000467819 DMBX1Q8NFW5 382 aa15.75■□□□□ 0.11
COL9A3-207ENST00000467819 OR10W1Q8NGF6 305 aa15.75■□□□□ 0.11
COL9A3-207ENST00000467819 A0A0A6YYH2 397 aa15.74■□□□□ 0.11
COL9A3-207ENST00000467819 A6NJ64 397 aa15.74■□□□□ 0.11
COL9A3-207ENST00000467819 POU2AF1Q16633 256 aa15.74■□□□□ 0.11
COL9A3-207ENST00000467819 RBPMS2Q6ZRY4 209 aaKnown RBP15.74■□□□□ 0.11
COL9A3-207ENST00000467819 MARC2Q969Z3 335 aa15.74■□□□□ 0.11
COL9A3-207ENST00000467819 OVOL2Q9BRP0 275 aa15.74■□□□□ 0.11
COL9A3-207ENST00000467819 QTRT1Q9BXR0 403 aaKnown RBP15.74■□□□□ 0.11
COL9A3-207ENST00000467819 Q9H521 79 aa15.74■□□□□ 0.11
COL9A3-207ENST00000467819 DIABLOQ9NR28 239 aa15.74■□□□□ 0.11
COL9A3-207ENST00000467819 UFC1Q9Y3C8 167 aa15.74■□□□□ 0.11
COL9A3-207ENST00000467819 HERV-K104P61576 105 aa15.73■□□□□ 0.11
COL9A3-207ENST00000467819 OR5AP2Q8NGF4 316 aa15.73■□□□□ 0.11
COL9A3-207ENST00000467819 OR1L6Q8NGR2 347 aa15.73■□□□□ 0.11
COL9A3-207ENST00000467819 GIMAP1Q8WWP7 306 aa15.73■□□□□ 0.11
COL9A3-207ENST00000467819 YTHDF1Q9BYJ9 559 aaKnown RBP15.73■□□□□ 0.11
COL9A3-207ENST00000467819 THYN1Q9P016 225 aa15.73■□□□□ 0.11
COL9A3-207ENST00000467819 MRPL27Q9P0M9 148 aaKnown RBP15.73■□□□□ 0.11
COL9A3-207ENST00000467819 TRAV25A0A0B4J276 109 aa15.72■□□□□ 0.11
COL9A3-207ENST00000467819 ATP6V1G2O95670 118 aa15.72■□□□□ 0.11
COL9A3-207ENST00000467819 C8orf88P0DMB2 117 aa15.72■□□□□ 0.11
COL9A3-207ENST00000467819 PTBP1P26599 531 aaKnown RBP eCLIP15.72■□□□□ 0.11
COL9A3-207ENST00000467819 CBX5P45973 191 aa15.72■□□□□ 0.11
COL9A3-207ENST00000467819 SRSF8Q9BRL6 282 aaKnown RBP15.72■□□□□ 0.11
COL9A3-207ENST00000467819 PLEKHA2Q9HB19 425 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms