RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 OR5P3Q8WZ94 311 aa7.4□□□□□ -1.22
HPS4-209ENST00000466781 NABP2Q9BQ15 211 aa7.4□□□□□ -1.22
HPS4-209ENST00000466781 C7orf66A4D0T2 115 aa7.4□□□□□ -1.23
HPS4-209ENST00000466781 TCF21O43680 179 aa7.4□□□□□ -1.23
HPS4-209ENST00000466781 MEF2BQ02080 365 aaPredicted RBP7.4□□□□□ -1.23
HPS4-209ENST00000466781 FAM27E3Q08E93 113 aa7.4□□□□□ -1.23
HPS4-209ENST00000466781 LDLRAD2Q5SZI1 272 aa7.4□□□□□ -1.23
HPS4-209ENST00000466781 C12orf54Q6X4T0 127 aa7.4□□□□□ -1.23
HPS4-209ENST00000466781 FOXA2Q9Y261 457 aaPredicted RBP7.4□□□□□ -1.23
HPS4-209ENST00000466781 LHFPL6Q9Y693 200 aa7.4□□□□□ -1.23
HPS4-209ENST00000466781 LINC00862A6NCI5 91 aa7.4□□□□□ -1.23
HPS4-209ENST00000466781 TMEM250H0YL14 139 aa7.4□□□□□ -1.23
HPS4-209ENST00000466781 J3QW42 95 aa7.4□□□□□ -1.23
HPS4-209ENST00000466781 EFEMP2O95967 443 aa7.4□□□□□ -1.23
HPS4-209ENST00000466781 HLA-DRB1P01911 266 aa7.4□□□□□ -1.23
HPS4-209ENST00000466781 PRSS22Q9GZN4 317 aa7.4□□□□□ -1.23
HPS4-209ENST00000466781 NPIPB8E9PQR5 432 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 NPIPB9F8W1W9 429 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 NPIPB7O75200 414 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 IGHMP01871 453 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 OTX1P32242 354 aaPredicted RBP7.39□□□□□ -1.23
HPS4-209ENST00000466781 GPR183P32249 361 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 GLRXP35754 106 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 FBXL15Q9H469 300 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 TMEM160Q9NX00 188 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 FAM206AQ9NX38 181 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 S4R3C0 116 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 SLC25A20O43772 301 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 ICAM4Q14773 271 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 DTX2Q86UW9 622 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 MRPS18AQ9NVS2 196 aaKnown RBP7.39□□□□□ -1.23
HPS4-209ENST00000466781 IGLV1-36A0A0B4J1U3 117 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 TRBV5-5A0A0J9YX44 114 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 A0A1W2PP11 408 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 IGHV3-48P01763 117 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 TMEM42Q69YG0 159 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 WDR82Q6UXN9 313 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 ACP7Q6ZNF0 438 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 PROB1E7EW31 1015 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 RRHO14718 337 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 ZIC3O60481 467 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 IRF3Q14653 427 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 RPL39P5Q59GN2 51 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 ZIC4Q8N9L1 334 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 TRBV7-9A0A0J9YWB2 115 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 MYOD1P15172 320 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 ATP5IP56385 69 aaPredicted RBP7.39□□□□□ -1.23
HPS4-209ENST00000466781 MEF2CQ06413 473 aaPredicted RBP7.39□□□□□ -1.23
HPS4-209ENST00000466781 AQP3Q92482 292 aa7.39□□□□□ -1.23
HPS4-209ENST00000466781 NXT2Q9NPJ8 142 aaKnown RBP7.39□□□□□ -1.23
HPS4-209ENST00000466781 TRBV9A0A0B4J1U6 114 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 TRAV24A0A0B4J272 114 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 GHRHP01286 108 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 SRIP30626 198 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 CDKN1AP38936 164 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 ZNRF1Q8ND25 227 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 OR11H4Q8NGC9 324 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 FOXC2Q99958 501 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 RPRMQ9NS64 109 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 JKAMPQ9P055 326 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 K7ERU9 68 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 SLC25A34Q6PIV7 304 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 ZNF818PQ6ZRF7 136 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 OR13A1Q8NGR1 328 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 SMIM8Q96KF7 97 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 GP6Q9HCN6 339 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 HBBP68871 147 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 LY6DQ14210 128 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 TBR1Q16650 682 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 C10orf126Q8N4M7 172 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 TMEM167AQ8TBQ9 72 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 RNASE6Q93091 150 aaKnown RBP7.38□□□□□ -1.23
HPS4-209ENST00000466781 SIGLEC12Q96PQ1 595 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 ALX4Q9H161 411 aaPredicted RBP7.38□□□□□ -1.23
HPS4-209ENST00000466781 C21orf62Q9NYP8 219 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 HOXA5P20719 270 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 PLSCR2Q9NRY7 297 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 TMEM8BA6NDV4 472 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 NPIPB4C9JG80 1138 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 WISP3O95389 354 aaPredicted RBP7.38□□□□□ -1.23
HPS4-209ENST00000466781 LIMS1P48059 325 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 NPBWR2P48146 333 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.38□□□□□ -1.23
HPS4-209ENST00000466781 OR1P1Q8NH06 330 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 C8orf46Q8TAG6 207 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 Q96M66 194 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 TRAF4Q9BUZ4 470 aaPredicted RBP7.38□□□□□ -1.23
HPS4-209ENST00000466781 CBLN4Q9NTU7 201 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 GPR132Q9UNW8 380 aa7.38□□□□□ -1.23
HPS4-209ENST00000466781 GCHFRP30047 84 aa7.37□□□□□ -1.23
HPS4-209ENST00000466781 P2RY4P51582 365 aa7.37□□□□□ -1.23
HPS4-209ENST00000466781 LEMD1Q68G75 181 aa7.37□□□□□ -1.23
HPS4-209ENST00000466781 DRAM1Q8N682 238 aa7.37□□□□□ -1.23
HPS4-209ENST00000466781 SSC4DQ8WTU2 575 aa7.37□□□□□ -1.23
HPS4-209ENST00000466781 PHLDA1Q8WV24 401 aaPredicted RBP7.37□□□□□ -1.23
HPS4-209ENST00000466781 HIST1H2BAQ96A08 127 aa7.37□□□□□ -1.23
HPS4-209ENST00000466781 SCGB3A1Q96QR1 104 aa7.37□□□□□ -1.23
HPS4-209ENST00000466781 SPSB2Q99619 263 aa7.37□□□□□ -1.23
HPS4-209ENST00000466781 PRSS23O95084 383 aa7.37□□□□□ -1.23
HPS4-209ENST00000466781 IGHV3-11P01762 117 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms