RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 C1QTNF5Q9BXJ0 243 aa12.79□□□□□ -0.36
SNED1-208ENST00000466618 NGBQ9NPG2 151 aa12.79□□□□□ -0.36
SNED1-208ENST00000466618 ANKHD1Q8IWZ3 2542 aaKnown RBP12.79□□□□□ -0.36
SNED1-208ENST00000466618 SPTBN1Q01082 2364 aaKnown RBP12.79□□□□□ -0.36
SNED1-208ENST00000466618 IGHV2OR16-5A0A0B4J2B6 119 aa12.79□□□□□ -0.36
SNED1-208ENST00000466618 F2Z2F3 143 aa12.79□□□□□ -0.36
SNED1-208ENST00000466618 TMPRSS2O15393 492 aa12.79□□□□□ -0.36
SNED1-208ENST00000466618 TOMM40O96008 361 aa12.79□□□□□ -0.36
SNED1-208ENST00000466618 LYG1Q8N1E2 194 aa12.79□□□□□ -0.36
SNED1-208ENST00000466618 ZNF114Q8NC26 417 aa12.79□□□□□ -0.36
SNED1-208ENST00000466618 SGMS2Q8NHU3 365 aa12.79□□□□□ -0.36
SNED1-208ENST00000466618 GCN1Q92616 2671 aaKnown RBP12.78□□□□□ -0.36
SNED1-208ENST00000466618 DEFB108AA8MXU0 73 aa12.78□□□□□ -0.36
SNED1-208ENST00000466618 NRASP01111 189 aa12.78□□□□□ -0.36
SNED1-208ENST00000466618 EGR1P18146 543 aa12.78□□□□□ -0.36
SNED1-208ENST00000466618 LOXP28300 417 aaPredicted RBP12.78□□□□□ -0.36
SNED1-208ENST00000466618 FAM222BQ8WU58 562 aa12.78□□□□□ -0.36
SNED1-208ENST00000466618 SPOCK3Q9BQ16 436 aa12.78□□□□□ -0.36
SNED1-208ENST00000466618 UTP20O75691 2785 aaKnown RBP12.78□□□□□ -0.36
SNED1-208ENST00000466618 RBFOX2O43251 390 aaKnown RBP eCLIP12.77□□□□□ -0.36
SNED1-208ENST00000466618 NAPSAO96009 420 aa12.77□□□□□ -0.36
SNED1-208ENST00000466618 CCNOP22674 350 aa12.77□□□□□ -0.36
SNED1-208ENST00000466618 GNB1P62873 340 aa12.77□□□□□ -0.36
SNED1-208ENST00000466618 BSPH1Q075Z2 132 aa12.77□□□□□ -0.36
SNED1-208ENST00000466618 SLC38A11Q08AI6 406 aa12.77□□□□□ -0.36
SNED1-208ENST00000466618 UBE2V1Q13404 147 aa12.77□□□□□ -0.36
SNED1-208ENST00000466618 SRSF7Q16629 238 aaKnown RBP eCLIP12.77□□□□□ -0.36
SNED1-208ENST00000466618 Q6ZVH6 145 aa12.77□□□□□ -0.36
SNED1-208ENST00000466618 ZNF709Q8N972 641 aa12.77□□□□□ -0.36
SNED1-208ENST00000466618 OR51H1Q8NH63 302 aa12.77□□□□□ -0.36
SNED1-208ENST00000466618 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.77□□□□□ -0.37
SNED1-208ENST00000466618 C11orf94C9JXX5 98 aa12.77□□□□□ -0.37
SNED1-208ENST00000466618 SPATA45Q537H7 98 aa12.77□□□□□ -0.37
SNED1-208ENST00000466618 SPANXN5Q5MJ07 72 aa12.77□□□□□ -0.37
SNED1-208ENST00000466618 ZDHHC23Q8IYP9 409 aa12.77□□□□□ -0.37
SNED1-208ENST00000466618 OR10G9Q8NGN4 311 aa12.77□□□□□ -0.37
SNED1-208ENST00000466618 OR10G7Q8NGN6 311 aa12.77□□□□□ -0.37
SNED1-208ENST00000466618 ALKBH7Q9BT30 221 aaPredicted RBP12.77□□□□□ -0.37
SNED1-208ENST00000466618 GSX1Q9H4S2 264 aaPredicted RBP12.77□□□□□ -0.37
SNED1-208ENST00000466618 LAMTOR2Q9Y2Q5 125 aa12.77□□□□□ -0.37
SNED1-208ENST00000466618 PRR14LQ5THK1 2151 aa12.77□□□□□ -0.37
SNED1-208ENST00000466618 PGPEP1LA6NFU8 196 aa12.76□□□□□ -0.37
SNED1-208ENST00000466618 J3QW42 95 aa12.76□□□□□ -0.37
SNED1-208ENST00000466618 HYPMO75409 117 aa12.76□□□□□ -0.37
SNED1-208ENST00000466618 NXPH2O95156 264 aa12.76□□□□□ -0.37
SNED1-208ENST00000466618 NGFP01138 241 aa12.76□□□□□ -0.37
SNED1-208ENST00000466618 IGKV1-5P01602 117 aa12.76□□□□□ -0.37
SNED1-208ENST00000466618 CRYAAP02489 173 aa12.76□□□□□ -0.37
SNED1-208ENST00000466618 CRISP2P16562 243 aa12.76□□□□□ -0.37
SNED1-208ENST00000466618 CBLN1P23435 193 aa12.76□□□□□ -0.37
SNED1-208ENST00000466618 FFAR4Q5NUL3 377 aa12.76□□□□□ -0.37
SNED1-208ENST00000466618 C1orf174Q8IYL3 243 aa12.76□□□□□ -0.37
SNED1-208ENST00000466618 PLPPR2Q96GM1 343 aa12.76□□□□□ -0.37
SNED1-208ENST00000466618 DERL1Q9BUN8 251 aa12.76□□□□□ -0.37
SNED1-208ENST00000466618 UQCR10Q9UDW1 63 aa12.76□□□□□ -0.37
SNED1-208ENST00000466618 CD300LBA8K4G0 201 aa12.76□□□□□ -0.37
SNED1-208ENST00000466618 SMPD2O60906 423 aa12.76□□□□□ -0.37
SNED1-208ENST00000466618 SERPINE2P07093 398 aa12.76□□□□□ -0.37
SNED1-208ENST00000466618 IGLC2P0DOY2 106 aa12.76□□□□□ -0.37
SNED1-208ENST00000466618 IGLC3P0DOY3 106 aa12.76□□□□□ -0.37
SNED1-208ENST00000466618 OR5P3Q8WZ94 311 aa12.76□□□□□ -0.37
SNED1-208ENST00000466618 LSM10Q969L4 123 aaKnown RBP12.76□□□□□ -0.37
SNED1-208ENST00000466618 SFRP2Q96HF1 295 aa12.76□□□□□ -0.37
SNED1-208ENST00000466618 RNF2Q99496 336 aa12.76□□□□□ -0.37
SNED1-208ENST00000466618 TMEM204Q9BSN7 226 aa12.76□□□□□ -0.37
SNED1-208ENST00000466618 FUT6P51993 359 aa12.75□□□□□ -0.37
SNED1-208ENST00000466618 ATP6V1FQ16864 119 aa12.75□□□□□ -0.37
SNED1-208ENST00000466618 TMEM14EPQ6UXP3 125 aa12.75□□□□□ -0.37
SNED1-208ENST00000466618 APOBEC3DQ96AK3 386 aaPredicted RBP12.75□□□□□ -0.37
SNED1-208ENST00000466618 PSMG3-AS1Q96PY0 264 aa12.75□□□□□ -0.37
SNED1-208ENST00000466618 A1L4Q6 167 aa12.74□□□□□ -0.37
SNED1-208ENST00000466618 DIRC3C9JPN6 131 aa12.74□□□□□ -0.37
SNED1-208ENST00000466618 MMP23AO75900 390 aa12.74□□□□□ -0.37
SNED1-208ENST00000466618 KRASP01116 189 aa12.74□□□□□ -0.37
SNED1-208ENST00000466618 DEFA4P12838 97 aa12.74□□□□□ -0.37
SNED1-208ENST00000466618 OR8G2PQ6IF36 304 aa12.74□□□□□ -0.37
SNED1-208ENST00000466618 HS3ST6Q96QI5 342 aa12.74□□□□□ -0.37
SNED1-208ENST00000466618 SAMD10Q9BYL1 202 aa12.74□□□□□ -0.37
SNED1-208ENST00000466618 MRPL18Q9H0U6 180 aaKnown RBP12.74□□□□□ -0.37
SNED1-208ENST00000466618 COX11Q9Y6N1 276 aa12.74□□□□□ -0.37
SNED1-208ENST00000466618 USP9YO00507 2555 aaPredicted RBP12.74□□□□□ -0.37
SNED1-208ENST00000466618 SHISA9B4DS77 424 aa12.74□□□□□ -0.37
SNED1-208ENST00000466618 SH2D1BO14796 132 aa12.74□□□□□ -0.37
SNED1-208ENST00000466618 HNF1AP20823 631 aa12.74□□□□□ -0.37
SNED1-208ENST00000466618 HNRNPA3P51991 378 aaKnown RBP12.74□□□□□ -0.37
SNED1-208ENST00000466618 Q0VG73 95 aa12.74□□□□□ -0.37
SNED1-208ENST00000466618 UNQ5815/PRO19632Q6UWF5 114 aa12.74□□□□□ -0.37
SNED1-208ENST00000466618 Q6ZN92 141 aa12.74□□□□□ -0.37
SNED1-208ENST00000466618 ZNF611Q8N823 705 aa12.74□□□□□ -0.37
SNED1-208ENST00000466618 NUP37Q8NFH4 326 aa12.74□□□□□ -0.37
SNED1-208ENST00000466618 SPSB4Q96A44 273 aa12.74□□□□□ -0.37
SNED1-208ENST00000466618 A0A1W2PN81 502 aa12.73□□□□□ -0.37
SNED1-208ENST00000466618 ATP5G3P48201 142 aa12.73□□□□□ -0.37
SNED1-208ENST00000466618 KRTDAPP60985 99 aa12.73□□□□□ -0.37
SNED1-208ENST00000466618 SUMO1P63165 101 aaKnown RBP12.73□□□□□ -0.37
SNED1-208ENST00000466618 PLCXD3Q63HM9 321 aa12.73□□□□□ -0.37
SNED1-208ENST00000466618 BAGE3Q86Y29 109 aa12.73□□□□□ -0.37
SNED1-208ENST00000466618 BAGE2Q86Y30 109 aa12.73□□□□□ -0.37
SNED1-208ENST00000466618 ATP23Q9Y6H3 246 aa12.73□□□□□ -0.37
SNED1-208ENST00000466618 DOCK11Q5JSL3 2073 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms