RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 OR8H1Q8NGG4 311 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 OR2T35Q8NGX2 323 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 TMEM167AQ8TBQ9 72 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 PPP1R1CQ8WVI7 109 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 R3HDM4Q96D70 268 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 TSNAXQ99598 290 aaKnown RBP4.39□□□□□ -1.71
VPS41-211ENST00000466017 PDCD10Q9BUL8 212 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 MRPL20Q9BYC9 149 aaKnown RBP4.39□□□□□ -1.71
VPS41-211ENST00000466017 C11orf1Q9H5F2 150 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 SIRT7Q9NRC8 400 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 HIF1ANQ9NWT6 349 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 TMEM160Q9NX00 188 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 FKBP11Q9NYL4 201 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 ZNF257Q9Y2Q1 563 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 POMT1Q9Y6A1 747 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 COL12A1Q99715 3063 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 WNK2Q9Y3S1 2297 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 TRAV14DV4A0A0A6YYC5 116 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 A0A0D9SG52 128 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 A0A0G2JRQ6 117 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 SRRM4A7MD48 611 aaKnown RBP4.38□□□□□ -1.71
VPS41-211ENST00000466017 E5RGE8 158 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 H0YIZ8 118 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 K7EPK0 472 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 UPK2O00526 184 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 CCSO14618 274 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 NPFFO15130 113 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 DEDDO75618 318 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 KBTBD11O94819 623 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 OR2F2O95006 317 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 NDUFA3O95167 84 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 VENTXO95231 258 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 CRYZL1O95825 349 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 TGFAP01135 160 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 IGLV2-23P01705 113 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 MBPP02686 304 aaPredicted RBP4.38□□□□□ -1.71
VPS41-211ENST00000466017 HNRNPCP07910 306 aaKnown RBP eCLIP4.38□□□□□ -1.71
VPS41-211ENST00000466017 C4BPBP20851 252 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 COX7A1P24310 79 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 BRS3P32247 399 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 G6PCP35575 357 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 NKX2-1P43699 371 aaPredicted RBP4.38□□□□□ -1.71
VPS41-211ENST00000466017 P2RY1P47900 373 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 AKR1C2P52895 323 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 LINC00205P59089 165 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 SPCS3P61009 180 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 HSPE1P61604 102 aaKnown RBP4.38□□□□□ -1.71
VPS41-211ENST00000466017 OR2F1Q13607 317 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 RAB32Q13637 225 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 DIAPH2-AS1Q14236 149 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 ZNF345Q14585 488 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 ZFP69Q49AA0 526 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 Q5BKY6 102 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 GPR157Q5UAW9 335 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 ACOT7LQ6ZUV0 252 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 FAM71E2Q8N5Q1 922 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 Q8N6K4 173 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 DRAXINQ8NBI3 349 aaPredicted RBP4.38□□□□□ -1.71
VPS41-211ENST00000466017 DMBX1Q8NFW5 382 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 OR11H4Q8NGC9 324 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 OR2T10Q8NGZ9 312 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 OR5B3Q8NH48 314 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 THAP6Q8TBB0 222 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 SMIM8Q96KF7 97 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 CIB3Q96Q77 187 aaPredicted RBP4.38□□□□□ -1.71
VPS41-211ENST00000466017 RAB40CQ96S21 281 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 SRSF8Q9BRL6 282 aaKnown RBP4.38□□□□□ -1.71
VPS41-211ENST00000466017 MS4A7Q9GZW8 240 aaPredicted RBP4.38□□□□□ -1.71
VPS41-211ENST00000466017 C1RLQ9NZP8 487 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 ZNRD1Q9P1U0 126 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 HSPB7Q9UBY9 170 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 PRNDQ9UKY0 176 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 FOXA2Q9Y261 457 aaPredicted RBP4.38□□□□□ -1.71
VPS41-211ENST00000466017 NSG2Q9Y328 171 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 WSB1Q9Y6I7 421 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 FLNCQ14315 2725 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 PTPN13Q12923 2485 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 LRRK2Q5S007 2527 aa4.38□□□□□ -1.71
VPS41-211ENST00000466017 HRNRQ86YZ3 2850 aaPredicted RBP4.38□□□□□ -1.71
VPS41-211ENST00000466017 C15orf61A6NNL5 157 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 A8MV72 311 aaPredicted RBP4.37□□□□□ -1.71
VPS41-211ENST00000466017 FAM25EA8MYX2 175 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 F5H697 171 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 TAAR5O14804 337 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 SYNGR2O43760 224 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 GPR137BO60478 399 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 TSPAN9O75954 239 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 MOSP00540 346 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 KRASP01116 189 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 IGKV1-16P04430 117 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 SNRNP70P08621 437 aaKnown RBP4.37□□□□□ -1.71
VPS41-211ENST00000466017 OR9G9P0C7N8 305 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 PVALBP20472 110 aaPredicted RBP4.37□□□□□ -1.71
VPS41-211ENST00000466017 SAA4P35542 130 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 COMPP49747 757 aaPredicted RBP4.37□□□□□ -1.71
VPS41-211ENST00000466017 PAX9P55771 341 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 PROK1P58294 105 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 RPS16P62249 146 aaKnown RBP4.37□□□□□ -1.71
VPS41-211ENST00000466017 CD300CQ08708 224 aa4.37□□□□□ -1.71
VPS41-211ENST00000466017 KLRD1Q13241 179 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms