RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 SLC38A6Q8IZM9 456 aa8.67□□□□□ -1.02
CNOT4-208ENST00000465721 OR10R2Q8NGX6 335 aa8.67□□□□□ -1.02
CNOT4-208ENST00000465721 OR4S2Q8NH73 311 aa8.67□□□□□ -1.02
CNOT4-208ENST00000465721 VSTM2AQ8TAG5 236 aa8.67□□□□□ -1.02
CNOT4-208ENST00000465721 ZNF502Q8TBZ5 544 aa8.67□□□□□ -1.02
CNOT4-208ENST00000465721 TMEM190Q8WZ59 177 aa8.67□□□□□ -1.02
CNOT4-208ENST00000465721 UFD1Q92890 307 aa8.67□□□□□ -1.02
CNOT4-208ENST00000465721 CXorf58Q96LI9 332 aa8.67□□□□□ -1.02
CNOT4-208ENST00000465721 ZNF436Q9C0F3 470 aaPredicted RBP8.67□□□□□ -1.02
CNOT4-208ENST00000465721 VCX3BQ9H321 246 aa8.67□□□□□ -1.02
CNOT4-208ENST00000465721 MAP6D1Q9H9H5 199 aa8.67□□□□□ -1.02
CNOT4-208ENST00000465721 RAB22AQ9UL26 194 aa8.67□□□□□ -1.02
CNOT4-208ENST00000465721 RBMX2Q9Y388 322 aaKnown RBP8.67□□□□□ -1.02
CNOT4-208ENST00000465721 UFC1Q9Y3C8 167 aa8.67□□□□□ -1.02
CNOT4-208ENST00000465721 A0A075B6Q4 140 aa8.66□□□□□ -1.02
CNOT4-208ENST00000465721 IGKV1D-13A0A0B4J2D9 117 aa8.66□□□□□ -1.02
CNOT4-208ENST00000465721 ARL6IP5O75915 188 aa8.66□□□□□ -1.02
CNOT4-208ENST00000465721 HLA-DQB1P01920 261 aa8.66□□□□□ -1.02
CNOT4-208ENST00000465721 IGKV1-13P0DP09 117 aa8.66□□□□□ -1.02
CNOT4-208ENST00000465721 CD36P16671 472 aa8.66□□□□□ -1.02
CNOT4-208ENST00000465721 CALRP27797 417 aaKnown RBP8.66□□□□□ -1.02
CNOT4-208ENST00000465721 NANOS2P60321 138 aaKnown RBP8.66□□□□□ -1.02
CNOT4-208ENST00000465721 IRF3Q14653 427 aa8.66□□□□□ -1.02
CNOT4-208ENST00000465721 MED22Q15528 200 aa8.66□□□□□ -1.02
CNOT4-208ENST00000465721 HES5Q5TA89 166 aa8.66□□□□□ -1.02
CNOT4-208ENST00000465721 NRG4Q8WWG1 115 aa8.66□□□□□ -1.02
CNOT4-208ENST00000465721 C11orf68Q9H3H3 251 aaKnown RBP8.66□□□□□ -1.02
CNOT4-208ENST00000465721 C8orf4Q9NR00 106 aa8.66□□□□□ -1.02
CNOT4-208ENST00000465721 ELF5Q9UKW6 265 aaPredicted RBP8.66□□□□□ -1.02
CNOT4-208ENST00000465721 OR2W1Q9Y3N9 320 aa8.66□□□□□ -1.02
CNOT4-208ENST00000465721 HSPG2P98160 4391 aa8.66□□□□□ -1.02
CNOT4-208ENST00000465721 IGLC7A0M8Q6 106 aa8.65□□□□□ -1.02
CNOT4-208ENST00000465721 DTYMKP23919 212 aa8.65□□□□□ -1.02
CNOT4-208ENST00000465721 GADD45AP24522 165 aa8.65□□□□□ -1.02
CNOT4-208ENST00000465721 PSMD7P51665 324 aa8.65□□□□□ -1.02
CNOT4-208ENST00000465721 RPL8P62917 257 aaKnown RBP8.65□□□□□ -1.02
CNOT4-208ENST00000465721 TCTEX1D2Q8WW35 142 aa8.65□□□□□ -1.02
CNOT4-208ENST00000465721 GALNT14Q96FL9 552 aa8.65□□□□□ -1.02
CNOT4-208ENST00000465721 HSD17B10Q99714 261 aaKnown RBP8.65□□□□□ -1.02
CNOT4-208ENST00000465721 DAZ1Q9NQZ3 744 aaKnown RBP8.65□□□□□ -1.02
CNOT4-208ENST00000465721 V9GY05 133 aa8.65□□□□□ -1.02
CNOT4-208ENST00000465721 OR4C46A6NHA9 309 aa8.64□□□□□ -1.03
CNOT4-208ENST00000465721 TGOLN2O43493 480 aa8.64□□□□□ -1.03
CNOT4-208ENST00000465721 DEFA4P12838 97 aa8.64□□□□□ -1.03
CNOT4-208ENST00000465721 HLA-GP17693 338 aa8.64□□□□□ -1.03
CNOT4-208ENST00000465721 NFYAP23511 347 aaPredicted RBP8.64□□□□□ -1.03
CNOT4-208ENST00000465721 OR2B8PP59922 312 aa8.64□□□□□ -1.03
CNOT4-208ENST00000465721 FABP5Q01469 135 aa8.64□□□□□ -1.03
CNOT4-208ENST00000465721 RBMS2Q15434 407 aaKnown RBP8.64□□□□□ -1.03
CNOT4-208ENST00000465721 SSX1Q16384 188 aa8.64□□□□□ -1.03
CNOT4-208ENST00000465721 TIMM50Q3ZCQ8 353 aa8.64□□□□□ -1.03
CNOT4-208ENST00000465721 PLET1Q6UQ28 207 aa8.64□□□□□ -1.03
CNOT4-208ENST00000465721 SSX9Q7RTT3 188 aa8.64□□□□□ -1.03
CNOT4-208ENST00000465721 GPHA2Q96T91 129 aa8.64□□□□□ -1.03
CNOT4-208ENST00000465721 CENPOQ9BU64 300 aa8.64□□□□□ -1.03
CNOT4-208ENST00000465721 MFFQ9GZY8 342 aa8.64□□□□□ -1.03
CNOT4-208ENST00000465721 BET1LQ9NYM9 111 aa8.64□□□□□ -1.03
CNOT4-208ENST00000465721 FBXL17Q9UF56 701 aa8.64□□□□□ -1.03
CNOT4-208ENST00000465721 SPATA2Q9UM82 520 aa8.64□□□□□ -1.03
CNOT4-208ENST00000465721 A0A1B0GVY2 172 aa8.63□□□□□ -1.03
CNOT4-208ENST00000465721 PTGES3LE9PB15 166 aa8.63□□□□□ -1.03
CNOT4-208ENST00000465721 SLC22A5O76082 557 aa8.63□□□□□ -1.03
CNOT4-208ENST00000465721 RAB6AP20340 208 aa8.63□□□□□ -1.03
CNOT4-208ENST00000465721 CRHBPP24387 322 aa8.63□□□□□ -1.03
CNOT4-208ENST00000465721 PSMA1P25786 263 aaKnown RBP8.63□□□□□ -1.03
CNOT4-208ENST00000465721 PTBP1P26599 531 aaKnown RBP eCLIP8.63□□□□□ -1.038e-7■■■■□ 22.3
CNOT4-208ENST00000465721 TALDO1P37837 337 aa8.63□□□□□ -1.03
CNOT4-208ENST00000465721 TCTAP57738 103 aa8.63□□□□□ -1.03
CNOT4-208ENST00000465721 OR10A3P58181 314 aa8.63□□□□□ -1.03
CNOT4-208ENST00000465721 TRAM1Q15629 374 aa8.63□□□□□ -1.03
CNOT4-208ENST00000465721 ZNF124Q15973 351 aa8.63□□□□□ -1.03
CNOT4-208ENST00000465721 APRG1Q8IVJ8 170 aa8.63□□□□□ -1.03
CNOT4-208ENST00000465721 OR5B3Q8NH48 314 aa8.63□□□□□ -1.03
CNOT4-208ENST00000465721 C11orf45Q8TAV5 145 aa8.63□□□□□ -1.03
CNOT4-208ENST00000465721 CD300LFQ8TDQ1 290 aa8.63□□□□□ -1.03
CNOT4-208ENST00000465721 C2CD4CQ8TF44 421 aa8.63□□□□□ -1.03
CNOT4-208ENST00000465721 TAS2R8Q9NYW2 309 aa8.63□□□□□ -1.03
CNOT4-208ENST00000465721 CASQ2O14958 399 aaPredicted RBP8.62□□□□□ -1.03
CNOT4-208ENST00000465721 HRASP01112 189 aa8.62□□□□□ -1.03
CNOT4-208ENST00000465721 CTSDP07339 412 aaPredicted RBP8.62□□□□□ -1.03
CNOT4-208ENST00000465721 RPA2P15927 270 aa8.62□□□□□ -1.03
CNOT4-208ENST00000465721 RANBP1P43487 201 aa8.62□□□□□ -1.03
CNOT4-208ENST00000465721 LAMTOR1Q6IAA8 161 aa8.62□□□□□ -1.03
CNOT4-208ENST00000465721 ZNF66Q6ZN08 573 aa8.62□□□□□ -1.03
CNOT4-208ENST00000465721 MFSD4AQ8N468 514 aa8.62□□□□□ -1.03
CNOT4-208ENST00000465721 OR4A5Q8NH83 315 aa8.62□□□□□ -1.03
CNOT4-208ENST00000465721 VN1R17PQ8TDU5 208 aa8.62□□□□□ -1.03
CNOT4-208ENST00000465721 ZNF414Q96IQ9 312 aa8.62□□□□□ -1.03
CNOT4-208ENST00000465721 RARRES2Q99969 163 aa8.62□□□□□ -1.03
CNOT4-208ENST00000465721 VCXQ9H320 206 aa8.62□□□□□ -1.03
CNOT4-208ENST00000465721 APLNQ9ULZ1 77 aa8.62□□□□□ -1.03
CNOT4-208ENST00000465721 IGHV3OR16-8A0A075B7F1 116 aa8.61□□□□□ -1.03
CNOT4-208ENST00000465721 TRAV3A0A0B4J244 114 aa8.61□□□□□ -1.03
CNOT4-208ENST00000465721 OR2T8A6NH00 312 aa8.61□□□□□ -1.03
CNOT4-208ENST00000465721 IFITM5A6NNB3 132 aa8.61□□□□□ -1.03
CNOT4-208ENST00000465721 F8W735 103 aaPredicted RBP8.61□□□□□ -1.03
CNOT4-208ENST00000465721 NDUFA4O00483 81 aa8.61□□□□□ -1.03
CNOT4-208ENST00000465721 IFNA4P05014 189 aa8.61□□□□□ -1.03
CNOT4-208ENST00000465721 CTXN2P0C2S0 81 aa8.61□□□□□ -1.03
CNOT4-208ENST00000465721 HSMCR30P0CW71 290 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms