RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 BET1LQ9NYM9 111 aa9.36□□□□□ -0.91
XRN1-204ENST00000465074 KLK11Q9UBX7 282 aa9.36□□□□□ -0.91
XRN1-204ENST00000465074 FBXL7Q9UJT9 491 aa9.36□□□□□ -0.91
XRN1-204ENST00000465074 DNAH3Q8TD57 4116 aa9.36□□□□□ -0.91
XRN1-204ENST00000465074 COL7A1Q02388 2944 aa9.35□□□□□ -0.91
XRN1-204ENST00000465074 UPK2O00526 184 aa9.35□□□□□ -0.91
XRN1-204ENST00000465074 CTDSP2O14595 271 aa9.35□□□□□ -0.91
XRN1-204ENST00000465074 RBFOX2O43251 390 aaKnown RBP eCLIP9.35□□□□□ -0.91
XRN1-204ENST00000465074 NOL3O60936 208 aaKnown RBP9.35□□□□□ -0.91
XRN1-204ENST00000465074 PGAM2P15259 253 aa9.35□□□□□ -0.91
XRN1-204ENST00000465074 F2RP25116 425 aa9.35□□□□□ -0.91
XRN1-204ENST00000465074 G6PCP35575 357 aa9.35□□□□□ -0.91
XRN1-204ENST00000465074 C15orf32Q32M92 178 aa9.35□□□□□ -0.91
XRN1-204ENST00000465074 RNASE10Q5GAN6 216 aaKnown RBP9.35□□□□□ -0.91
XRN1-204ENST00000465074 C11orf87Q6NUJ2 197 aa9.35□□□□□ -0.91
XRN1-204ENST00000465074 LPCAT3Q6P1A2 487 aa9.35□□□□□ -0.91
XRN1-204ENST00000465074 LAX1Q8IWV1 398 aa9.35□□□□□ -0.91
XRN1-204ENST00000465074 NECAP1Q8NC96 275 aa9.35□□□□□ -0.91
XRN1-204ENST00000465074 OR6Q1Q8NGQ2 317 aa9.35□□□□□ -0.91
XRN1-204ENST00000465074 OR4A5Q8NH83 315 aa9.35□□□□□ -0.91
XRN1-204ENST00000465074 FCAMRQ8WWV6 532 aa9.35□□□□□ -0.91
XRN1-204ENST00000465074 DGCR14Q96DF8 476 aaKnown RBP9.35□□□□□ -0.91
XRN1-204ENST00000465074 ASCL2Q99929 193 aa9.35□□□□□ -0.91
XRN1-204ENST00000465074 PLEKHA2Q9HB19 425 aa9.35□□□□□ -0.91
XRN1-204ENST00000465074 SLC2A9Q9NRM0 540 aa9.35□□□□□ -0.91
XRN1-204ENST00000465074 ZNF257Q9Y2Q1 563 aa9.35□□□□□ -0.91
XRN1-204ENST00000465074 A0A1B0GW64 132 aa9.34□□□□□ -0.91
XRN1-204ENST00000465074 PPP5D1E7EU14 171 aa9.34□□□□□ -0.91
XRN1-204ENST00000465074 SNAPC5O75971 98 aa9.34□□□□□ -0.91
XRN1-204ENST00000465074 NDUFB8O95169 186 aa9.34□□□□□ -0.91
XRN1-204ENST00000465074 BRI3O95415 125 aa9.34□□□□□ -0.91
XRN1-204ENST00000465074 DHFRP00374 187 aa9.34□□□□□ -0.91
XRN1-204ENST00000465074 CD3DP04234 171 aa9.34□□□□□ -0.91
XRN1-204ENST00000465074 ZNF735P0CB33 412 aa9.34□□□□□ -0.91
XRN1-204ENST00000465074 PSMB6P28072 239 aa9.34□□□□□ -0.91
XRN1-204ENST00000465074 KLF5Q13887 457 aaPredicted RBP9.34□□□□□ -0.91
XRN1-204ENST00000465074 TBC1D26Q86UD7 250 aa9.34□□□□□ -0.91
XRN1-204ENST00000465074 OR10W1Q8NGF6 305 aa9.34□□□□□ -0.91
XRN1-204ENST00000465074 OR9G4Q8NGQ1 327 aa9.34□□□□□ -0.91
XRN1-204ENST00000465074 ABHD1Q96SE0 405 aa9.34□□□□□ -0.91
XRN1-204ENST00000465074 B9D2Q9BPU9 175 aa9.34□□□□□ -0.91
XRN1-204ENST00000465074 MIXL1Q9H2W2 232 aa9.34□□□□□ -0.91
XRN1-204ENST00000465074 COMMD9Q9P000 198 aa9.34□□□□□ -0.91
XRN1-204ENST00000465074 NSG2Q9Y328 171 aa9.34□□□□□ -0.91
XRN1-204ENST00000465074 TRBV9A0A0B4J1U6 114 aa9.33□□□□□ -0.92
XRN1-204ENST00000465074 MARCH11A6NNE9 402 aa9.33□□□□□ -0.92
XRN1-204ENST00000465074 NPIPB5A8MRT5 1133 aa9.33□□□□□ -0.92
XRN1-204ENST00000465074 HLA-AP01891 365 aaKnown RBP9.33□□□□□ -0.92
XRN1-204ENST00000465074 TRAPPC2P0DI81 140 aa9.33□□□□□ -0.92
XRN1-204ENST00000465074 TRAPPC2BP0DI82 140 aa9.33□□□□□ -0.92
XRN1-204ENST00000465074 GP9P14770 177 aa9.33□□□□□ -0.92
XRN1-204ENST00000465074 PI3P19957 117 aa9.33□□□□□ -0.92
XRN1-204ENST00000465074 MECP2P51608 486 aaKnown RBP9.33□□□□□ -0.92
XRN1-204ENST00000465074 PPP5CP53041 499 aa9.33□□□□□ -0.92
XRN1-204ENST00000465074 OR2B8PP59922 312 aa9.33□□□□□ -0.92
XRN1-204ENST00000465074 SCGB2B2Q4G0G5 96 aa9.33□□□□□ -0.92
XRN1-204ENST00000465074 CLEC19AQ6UXS0 136 aa9.33□□□□□ -0.92
XRN1-204ENST00000465074 RAB2BQ8WUD1 216 aa9.33□□□□□ -0.92
XRN1-204ENST00000465074 ZC4H2Q9NQZ6 224 aa9.33□□□□□ -0.92
XRN1-204ENST00000465074 LSM4Q9Y4Z0 139 aaKnown RBP9.33□□□□□ -0.92
XRN1-204ENST00000465074 TEX50A0A1B0GTY4 177 aa9.32□□□□□ -0.92
XRN1-204ENST00000465074 CCDC160A6NGH7 325 aa9.32□□□□□ -0.92
XRN1-204ENST00000465074 CGB1A6NKQ9 187 aa9.32□□□□□ -0.92
XRN1-204ENST00000465074 BMPR1BO00238 502 aa9.32□□□□□ -0.92
XRN1-204ENST00000465074 OR2C1O95371 312 aa9.32□□□□□ -0.92
XRN1-204ENST00000465074 OR13C7P0DN81 318 aa9.32□□□□□ -0.92
XRN1-204ENST00000465074 RPL5P46777 297 aaKnown RBP9.32□□□□□ -0.92
XRN1-204ENST00000465074 TMBIM6P55061 237 aa9.32□□□□□ -0.92
XRN1-204ENST00000465074 IL18Q14116 193 aa9.32□□□□□ -0.92
XRN1-204ENST00000465074 ZNF585BQ52M93 769 aa9.32□□□□□ -0.92
XRN1-204ENST00000465074 SLC38A6Q8IZM9 456 aa9.32□□□□□ -0.92
XRN1-204ENST00000465074 C15orf40Q8WUR7 153 aa9.32□□□□□ -0.92
XRN1-204ENST00000465074 DIRAS2Q96HU8 199 aa9.32□□□□□ -0.92
XRN1-204ENST00000465074 QTRT1Q9BXR0 403 aaKnown RBP9.32□□□□□ -0.92
XRN1-204ENST00000465074 C6orf62Q9GZU0 229 aaPredicted RBP9.32□□□□□ -0.92
XRN1-204ENST00000465074 MTFP1Q9UDX5 166 aa9.32□□□□□ -0.92
XRN1-204ENST00000465074 OR51B2Q9Y5P1 312 aa9.32□□□□□ -0.92
XRN1-204ENST00000465074 SMAD5-AS1Q9Y6J3 95 aa9.32□□□□□ -0.92
XRN1-204ENST00000465074 SORL1Q92673 2214 aa9.31□□□□□ -0.92
XRN1-204ENST00000465074 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.31□□□□□ -0.92
XRN1-204ENST00000465074 ZNF320A2RRD8 509 aa9.31□□□□□ -0.92
XRN1-204ENST00000465074 RAB3DO95716 219 aa9.31□□□□□ -0.92
XRN1-204ENST00000465074 HIST1H1BP16401 226 aaKnown RBP9.31□□□□□ -0.92
XRN1-204ENST00000465074 CTRB1P17538 263 aa9.31□□□□□ -0.92
XRN1-204ENST00000465074 ARL3P36405 182 aa9.31□□□□□ -0.92
XRN1-204ENST00000465074 POU2AF1Q16633 256 aa9.31□□□□□ -0.92
XRN1-204ENST00000465074 VAX1Q5SQQ9 334 aa9.31□□□□□ -0.92
XRN1-204ENST00000465074 CTRB2Q6GPI1 263 aa9.31□□□□□ -0.92
XRN1-204ENST00000465074 SLC25A24Q6NUK1 477 aa9.31□□□□□ -0.92
XRN1-204ENST00000465074 H2BFWTQ7Z2G1 175 aa9.31□□□□□ -0.92
XRN1-204ENST00000465074 OR4D10Q8NGI6 311 aa9.31□□□□□ -0.92
XRN1-204ENST00000465074 OR1L8Q8NGR8 309 aa9.31□□□□□ -0.92
XRN1-204ENST00000465074 EEF1AKMT3Q96AZ1 226 aa9.31□□□□□ -0.92
XRN1-204ENST00000465074 FANCD2OSQ96PS1 177 aa9.31□□□□□ -0.92
XRN1-204ENST00000465074 PEMTQ9UBM1 199 aa9.31□□□□□ -0.92
XRN1-204ENST00000465074 SELENOKQ9Y6D0 94 aa9.31□□□□□ -0.92
XRN1-204ENST00000465074 IGHV3-21A0A0B4J1V1 117 aa9.3□□□□□ -0.92
XRN1-204ENST00000465074 IGLC7A0M8Q6 106 aa9.3□□□□□ -0.92
XRN1-204ENST00000465074 GABARAPH6UMI1 98 aa9.3□□□□□ -0.92
XRN1-204ENST00000465074 GGCTO75223 188 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms